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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0008600 |
| Transcript ID | LotjaGi2g1v0008600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G33950.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q940H6|SRK2E_ARATH Serine/threonine-protein kinase SRK2E; TrEMBL-Plants: tr|U3PSE0|U3PSE0_POPTN Serine/threonine protein kinase; Found in the gene: LotjaGi2g1v0008600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:2879600..2882888) extracted from Lotus japonicus Gifu genome v1.2.
ATGATCAATTTGATTTTTTGTAATGTTTTAGCCTAATTCTAAACATTGGTTGTGGTTGTAAAATTGAAAGTAATATTGCT CTTGTAAGCTTGATGGCAGGCCTTAACTTGATTGCCTTGATTCAGTAACCCATATTTGCACCTCTATTCCCCCTTACAAG GAAGCTTATTTCCTCTACTCTGACAATCTCAATGATTTTTGTGTTTGTGGGCTTGAATTAATTGAAGTTTGGAAGAGTTG CATGAATACGATTTTTTCTGCTTGATTTTGAGCTTTACCGTACTTATTTTTTTTAACAGATAGATGAAAATGTACAAAGG GAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTTGTACTCTTTACACTGTACACAT CCAATCTTCCTACCTGAGATGCATTTTAATTAGTTCTCATACTGTGAAAATATAGGTAATACTGACCCCTACACATTTAG CTATCGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGCGGTTCAATGAGGATGAGGTT CTTATCTATGGAATTCAAGCATTTTTGTTGAGGTACTGCTATTGCAGTTCCCTCTAATGCCTATTATACTGTCCTGCAGG CACGCTTCTTCTTCCAACAGCTTATATCTGGTGTTAGCTACTGTCATTCAATGGTATGTGAGTTCACCACATCTAGTGCA TGTTTGGAAATTCTTCTAAAATTGATTTAAAGCCAAAATCAATTATGGAGAGAAACTTCGGTGAGTAGCTTTTGGGTGCC ATAATTGATTCTGAAGAAAGAGAAGTTAATCCAAACATGCTATTAGTCTTTAACTTTTACAACAGCACATTTGCGACCCA AAAGATATAGTGAAATGTCTTACTAGAATATCTCTCTTTGTCTTCTCTAATATAGCAAGTTTGCCATCGTGACTTAAAGT TGGAGAACACATTGCTTGATGGTAGTCCAGCTCCGCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGGTATACTTTCCT TCTTCATTCTGTTGATATCTTCAGGTTCATAGTACCTGCATTCCAGATTATTGCAATTGTATTTGAACTGAGCGCTATTA AAAAAGTTAATTAAACTTCTATTTTCCACCAAGATCTCGCAAATTTCTTTGTTCGTCCTTTACCTGGGGTGGATTATTTG TGATATCTATGATGCAAAGTTTGACTCTTCTTTTTTGCAGTCCTCAGTCTTACATTCACAACCAAAATCTACAGTTGGTA CCCCTGCATATATCGCTCCTGAAATTTTGCTTAAGAAGGAATATGATGGCAAGGTATTTGGTAACTTCAATCTCCTGAAG AAAATTCATCTAACTAGTGAATTCTGAGAATTTCAGTTGAGATGTTCTTTATTTTAGCTCTGTGCTTTAGCATGTTTTGT TTATGTTGTAGTTTTATCTTTACCTTGGCCATTTTACTTATAACTTCCATTTTGTAAATTGGCATTTGTGACGACAATCA CTTGTTAATTGGTTCAATGAAAGACTCACTATTAACTGATAGTTCTAGTTTCACCTCAGAAAAACTAGAAAGATATGTTG TACAATGATCAGTGTTCTTCCTCAACCTCTGGATCTTGGTCAGCAATTCCTACTCAAGGATGCATGGTGGTGCTCGGCTA TAAGGATGGATGGAACAAGGCGGAGCACTGTAACTGCAAAAGGCATTTCGACGCTCAAGTCAGACAAGTGTGATTAGAGT ATAAGGAAGATCAATAGAGAGCATAGAGTCTACCTTTCTTTGTAATGATAGTATTTATACCTGGTTCATACATGGGACTT CTTTGTCTCATCGGCTACTGAGCAGTAACCGCTTGCCAGCATGGCATAACTGTTTGCCCCCGTGGCATAATCACCTAATC ATTGATTAAATGGCCTAACCAACCTTGCATTGCTGGCATAACTGATTTGTATAGCCGTCTTCCATGCGTCAAGTCTGACC CTGGCCCAGCAATGAACAGGTCAATTGGGCCTTAACTCTTTGGGCTGGCTGGCCGGATCTCGACCTAGAACAATCAGGAA TATAATTGGATTGTCACTTGTTTAGCCTCATCCAACGTGTTTAGGTCATTTGGTTTGTTCTAGACTTTGGTTACCAACTG GAGTTGATGTTTTAGTATCCATTGGAGAAAGACCTACCATAATGGTCAATGTAAAAGTATTTCTCACCTTAACCAAATAT TCACCTCCTCCTTCTCCAAATAAATGAAGAAAAACAACTGTAGAGAATGGAAATATTTTTCTATTTAAGACTCATTGCAC CTGCTGTTTGTATCCCCAATGTGAATGTTTCTTTTCTTCTTATTACTTTTTCTTTGTACGTTTGTGTTGAGTGGCAGCTG CGTTGAGAGGGAAATTTCCATAAACATCAGAGTAATGCATAAGCACTGGTTTCAGACTAGCACTTTTTTTCTTGTTTACT AATTCTTTGTACTGATGTTGTTACTCAACTATGACTCAGCTTGCAGATGTGTGGTCTTGTGGGGTGACTTTATATGTGAT GTTGGTGGGCGCATATCCTTTCGAGGATCCTGATGAACCTAAGAATTTCCGGAAGACAATTCATGTAACCTTGCACACCT TTTTTAGGTCAATGCAGCAATAACATTGAATTACTCTTCTGAAATCTTGGATTTTGCTTGCAGAGGATTATGAAAGTCCA GTACTCAATTCCTGATTATGTTCATGTATCTCCTGAGTGCTGTCATCTTATCTCAAGGATCTTTGTTGCAGACCCTGCAC AGGTCATTTCCCAAAACTTACGTGTTTTATTTACATAATTGAGCCCTATTGTCATATATTTCCCTTATAAAGAGTTGAAG AAATGTACACTTCTATTACATCCTCCTCTTTTGTTTCTTTTTTCCTTTTCTAATTGCTGAAGGACGATGGCATGATATTT CAACTAGAAACTAATTTTATTTGAAGCAGAGAATAAGTATTCCCGAGATTCGAAACCATGGGTGGTTTTTGAAGAACCTT CCAGCTGATCTGATGGTTGAGAATGTGAAAATGAACAACCAGTTTCAGGAGCCTGATCAACCAATGCAGAGCAATGAAGA AATCATGCAGATAATTAGTGAGGCTACAATTCCTGCTGCCGGAACTCAGACTCTCGACCAGTATCTGACCGGTGGCTTGG ACATTGATGACGACGAGATGGATGAGGACCTCGAATCCGATGCTGACCTTGAAATTGATAGCAGTGGAGAAATAGTATAT GCTATGTAA
CDS sequence (LotjaGi2g1v0008600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAATTTGATTTTTTGTAATGTTTTAATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCA TCCCAATATTGTCAGGTTCAAGGAGGTAATACTGACCCCTACACATTTAGCTATCGTGATGGAATATGCTTCTGGAGGAG AGCTATTTGAGCGAATATGCAATGCAGGGCGGTTCAATGAGGATGAGGCACGCTTCTTCTTCCAACAGCTTATATCTGGT GTTAGCTACTGTCATTCAATGCAAGTTTGCCATCGTGACTTAAAGTTGGAGAACACATTGCTTGATGGTAGTCCAGCTCC GCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGTCCTCAGTCTTACATTCACAACCAAAATCTACAGTTGGTACCCCTG CATATATCGCTCCTGAAATTTTGCTTAAGAAGGAATATGATGGCAAGCTTGCAGATGTGTGGTCTTGTGGGGTGACTTTA TATGTGATGTTGGTGGGCGCATATCCTTTCGAGGATCCTGATGAACCTAAGAATTTCCGGAAGACAATTCATAGGATTAT GAAAGTCCAGTACTCAATTCCTGATTATGTTCATGTATCTCCTGAGTGCTGTCATCTTATCTCAAGGATCTTTGTTGCAG ACCCTGCACAGAGAATAAGTATTCCCGAGATTCGAAACCATGGGTGGTTTTTGAAGAACCTTCCAGCTGATCTGATGGTT GAGAATGTGAAAATGAACAACCAGTTTCAGGAGCCTGATCAACCAATGCAGAGCAATGAAGAAATCATGCAGATAATTAG TGAGGCTACAATTCCTGCTGCCGGAACTCAGACTCTCGACCAGTATCTGACCGGTGGCTTGGACATTGATGACGACGAGA TGGATGAGGACCTCGAATCCGATGCTGACCTTGAAATTGATAGCAGTGGAGAAATAGTATATGCTATGTAA
Protein sequence (LotjaGi2g1v0008600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MINLIFCNVLIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFNEDEARFFFQQLISG VSYCHSMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILLKKEYDGKLADVWSCGVTL YVMLVGAYPFEDPDEPKNFRKTIHRIMKVQYSIPDYVHVSPECCHLISRIFVADPAQRISIPEIRNHGWFLKNLPADLMV ENVKMNNQFQEPDQPMQSNEEIMQIISEATIPAAGTQTLDQYLTGGLDIDDDEMDEDLESDADLEIDSSGEIVYAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 230 | 230 | 40.923 | ||
| SMART | 4 | 230 | 227 | 2.0E-71 | ||
| Gene3D | 8 | 284 | 277 | 3.4E-79 | – | |
| Pfam | 12 | 230 | 219 | 4.7E-62 | ||
| SUPERFAMILY | 12 | 266 | 255 | 2.16E-72 | ||
| PANTHER | 13 | 311 | 299 | 1.0E-184 | – | |
| PANTHER | 13 | 311 | 299 | 1.0E-184 | – | |
| ProSitePatterns | 89 | 101 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0008600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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