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LotjaGi2g1v0018700.1

Overview

Field Value
Gene ID LotjaGi2g1v0018700
Transcript ID LotjaGi2g1v0018700.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I3T9J0|I3T9J0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0018700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:6899233..6902531) extracted from Lotus japonicus Gifu genome v1.2.

ACACATTTGAATGTTAAAAGAAAAATTAAAGAAAGGGACAGGTTACATCAAAAGAAAAGTCCAGGTACAAACTCTACTCA AAAGAAAAGTCATAGAAATATATATATATATATATATGACCTGGCTACATCATTGATGATGTCATTTGATTTTAACACAA ATAATTTGACTCTAATTCAAACTGATGATTGCATATGTGCAGTTGAAACATCTTGCCTCTCTATATAAACAAGACGGAAA TTGAAGAACATAAGCAACAACTTGTTACTGAATTGAAGTAGCAAGAATAAAAATGAGTTCCAATTCCAAACAAAATCAGC ACTCTGTTGAAGTAACAGAGGTTGATGATGCTTACCCCATTGCTCTGTCACTATGCTTCAGTCGAATTTTTCCTGCAATT TTGAATGCTGCTGTTGATCTCAATTTGTTTGATATCATTGCAAAGGCACAAAAATCAAGTGGTTCAAGCTTGTCTGCTGC TGAAATTGCTTCTCACCTTCCATTTCAACACTCAGAATTGGCCATTAGGCTTGAAAGGATGTTACCTGTGTTGGCTAGTT TTTCTCTGTTAACTTGCTCCATTCGCACCACTGAAGGTGGTAACAGAGAAAGAGTCTATGCTATCTCACCTGTTGGAAAG TACTTTATATCCGACAACAATGAAGGCTCTTTGGGACCCCTCTCCGCTTTAATGCATAGAGGATTTCGCGATATTTGGTA ATCAAGCATTTATTACTCAAACTCATAGCATGTTGGGAAATTCTTATATTATTAATTCTAAGAACTTAGAATGCGTTTCG TTAAACATTGAAAGTGGTAAGAAAGTGGGTAACACGGTTTTTATGTATGTTTTTCCAAAGTTTTAAAATTGTTTCATAAA TAAAATAAATTTCCATATTTTTGTCAATGCGTATATAAACATGTTTAGAATACTTAGAATCAATTTATAGGGAGAAACTT ATATATGGGGAGACACTTTTAGATATTAGGTATCAAAATTAATTTTGGAGAAAATGGATTTATTGATTTTTAATATGATC TCTCATTTTGTTTCTTTTTTCAGGAATGATGTCAAGGATGCCATTGTTGACCCTAACAACAATAACCAATTCAAAAATGC CTATGGATCGCTACCTTTTCAATATATGGAGAAAAATCATGGATTGAATGACTTGTTCAACAAAGCAATGGCCGGGGCCA GCACCTTGGAATTGAATCAAATCCTTAAGATATATAAAGGATTTGAGGGAGTGTCAACATTGGTTGATGTTGGTGGTGGA GTAGGTCAGGCCTTGGAACAAATTCTCTCTCAATATCCTTCAATAAAAGGAATCAACTTTGATTTGCCTCAAGTAATTCA AACCGCCCCACCTCATCCAGGTAATATACATCATTCTCTGTTTTTATTTAGAACCTACAATATTGTTTACAAAATGGATT TATTAATTAAAATTTCATTTGGACAAAATTAATAATTACAAAACACATGCTTGGCTTGAAGGGATTGAGCATGTTCCGGG AGATATGTTTGAAAGTGTTCCATCTGGTGATGCCATCATGCTAAAGGTTAGTGAACCAAATGAAATATCAAGTTTATGTT TATATAATGAATAAAAATGATTCGTGTATTATAATTTTGTGGCAAATCCTGATATTTGCGGTAGTTTTTTATTGCCACAA ATTACAAAACTTATTACAAAATAAACTCTGCAATTTATGCAGGTATAAAATCCTTACATAATGTAGGTTTATAGATATCT ACAACAAAAGAGTGGTACACGAATCAACTCGGTATAAAGAATTCAATATGACATAAAAAAAAGTTCTAGTACTCACGTAT GTATCATGTCTTTCTTTTCTGGTTATTTCAGCGTACATGTCACAATTGGTCCGATGAAGATTGTGTGAAATTTTTGAGAA ATTGTCATAAAGCTTTGCCAGAGCATGGAAAGGTGATTATTGTGGAAAATATATATCCAGAAGTTCCAAACTCAAGCGTT ATGTCTAAGTGTGTCAGTGCTGGTGACAATCTCATGTTTTTGGTACATCGTTCAATGGAAAGAACTGAGAATGAATTTCG AAGCTTGTGCTCTAATTCTGGATTTTCCAAATTTCATCTTGCATGCGGCAGTGGTTCCTCGTCTGTAATGGGAGTGATGG AATTTTATAAATAAGGATGACAAATAAGAAGCTCGGATTCTCAACAAGTTGCCAGCTCTCTTGAAAAATGTTGAGAGATC GAGGAAATAATGGAATCTGTTTTGCATTGTTTTTATGTACTCGTGCTTTATTTAATATTGATCCGTTATAATAATGTTAC AAATAAGTTGAGTTATATGAATGTGAACAAATACATTTAAAACCTATAATTCTGATAAGCGCATTGTAGTGTTGCAATCA CATTTTCTCTTTATTCTCACTTAAACCTGCCACATAATATTTTAAGGTGAGGTGTCATATTCTAGCTCTTTGTGTTTTTT GGTAATCTTATGAAAAACATTTTAGTTTATCAATCCTACCAATTAATCTATTCGGTCCGCTGCCCCTCGCCCCTTACTTT AGCTTCTTAGGCACCCTTCAATATTCCATATCATTTCTCTCGCATCGCGAACCCGACTCGCTCCGTGTATTGCTTCAACG TTTAATGAACAGACACAGGAACGTGTAGCCTTACCTGTCACCGCCTAGAATTGGCTTTTATGGCCTAAAATCTCGGGGCT GAAGAAGTAGCACAGTGTCAAGTATTAGATGATGGACTCGCTCCTCTACAAAGACATCGAGCGCAAAGAAAGCAGCCAGA GTACCAGATCTAGAGCTTGTTCGCACGTTCTTTGTTCCATGTTTCTCTTAGTTGATCTTTAACACACACGACCCCACTAT AAAGGATCTCGGTACGCGGATCGATTGCCAATTGGAGGTGCATCATCGATTCTCATAACCTTGTTCTTAAACAAGGAAGA AAACACTATGAAGGCCAACCGCTGAAGTCCAAATGGTTTATTTCGCTTGCTTTATGTATAATGACTCACACTGAGAGTTT TATGGAGGCACCATGGAGATCGAACCAGACCTCCCCTCTGTGCGCGTGTGCGTGTGTGTGTGTGCGCGTGTGGATGTGTG TGCGTGTGTGTGCATGCGCGCGTGTGATGAGGTAGGTAATCAATTCCATTCAACCTTAACATTGGCTTTTTTTCAGCAAT TGATTCTCTAGTTCAAGCCACAGGCAATCTTGACTTTTAAATTTTTTTCTCTACTTTCTTGCTAACCTGTGAGCTATCTT TTCAATTTCACAGTCAAAC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0018700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTTCCAATTCCAAACAAAATCAGCACTCTGTTGAAGTAACAGAGGTTGATGATGCTTACCCCATTGCTCTGTCACT ATGCTTCAGTCGAATTTTTCCTGCAATTTTGAATGCTGCTGTTGATCTCAATTTGTTTGATATCATTGCAAAGGCACAAA AATCAAGTGGTTCAAGCTTGTCTGCTGCTGAAATTGCTTCTCACCTTCCATTTCAACACTCAGAATTGGCCATTAGGCTT GAAAGGATGTTACCTGTGTTGGCTAGTTTTTCTCTGTTAACTTGCTCCATTCGCACCACTGAAGGTGGTAACAGAGAAAG AGTCTATGCTATCTCACCTGTTGGAAAGTACTTTATATCCGACAACAATGAAGGCTCTTTGGGACCCCTCTCCGCTTTAA TGCATAGAGGATTTCGCGATATTTGGAATGATGTCAAGGATGCCATTGTTGACCCTAACAACAATAACCAATTCAAAAAT GCCTATGGATCGCTACCTTTTCAATATATGGAGAAAAATCATGGATTGAATGACTTGTTCAACAAAGCAATGGCCGGGGC CAGCACCTTGGAATTGAATCAAATCCTTAAGATATATAAAGGATTTGAGGGAGTGTCAACATTGGTTGATGTTGGTGGTG GAGTAGGTCAGGCCTTGGAACAAATTCTCTCTCAATATCCTTCAATAAAAGGAATCAACTTTGATTTGCCTCAAGTAATT CAAACCGCCCCACCTCATCCAGGGATTGAGCATGTTCCGGGAGATATGTTTGAAAGTGTTCCATCTGGTGATGCCATCAT GCTAAAGCGTACATGTCACAATTGGTCCGATGAAGATTGTGTGAAATTTTTGAGAAATTGTCATAAAGCTTTGCCAGAGC ATGGAAAGGTGATTATTGTGGAAAATATATATCCAGAAGTTCCAAACTCAAGCGTTATGTCTAAGTGTGTCAGTGCTGGT GACAATCTCATGTTTTTGGTACATCGTTCAATGGAAAGAACTGAGAATGAATTTCGAAGCTTGTGCTCTAATTCTGGATT TTCCAAATTTCATCTTGCATGCGGCAGTGGTTCCTCGTCTGTAATGGGAGTGATGGAATTTTATAAATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0018700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSNSKQNQHSVEVTEVDDAYPIALSLCFSRIFPAILNAAVDLNLFDIIAKAQKSSGSSLSAAEIASHLPFQHSELAIRL ERMLPVLASFSLLTCSIRTTEGGNRERVYAISPVGKYFISDNNEGSLGPLSALMHRGFRDIWNDVKDAIVDPNNNNQFKN AYGSLPFQYMEKNHGLNDLFNKAMAGASTLELNQILKIYKGFEGVSTLVDVGGGVGQALEQILSQYPSIKGINFDLPQVI QTAPPHPGIEHVPGDMFESVPSGDAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVPNSSVMSKCVSAG DNLMFLVHRSMERTENEFRSLCSNSGFSKFHLACGSGSSSVMGVMEFYK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
1 118 118 9.6E-32
IPR036388
PIRSF
PIRSF005739
1 369 369 2.7E-111
IPR016461
PANTHER
PTHR11746:SF223
10 369 360 1.6E-180 –
PANTHER
PTHR11746
10 369 360 1.6E-180 –
SUPERFAMILY
SSF46785
16 122 107 4.41E-22
IPR036390
ProSiteProfiles
PS51683
25 369 345 66.717
IPR016461
Pfam
PF08100
36 88 53 3.8E-12
IPR012967
Gene3D
G3DSA:3.40.50.150
124 369 246 1.1E-70 –
SUPERFAMILY
SSF53335
134 357 224 4.49E-50
IPR029063
Pfam
PF00891
142 348 207 1.2E-61
IPR001077
CDD
cd02440
207 300 94 1.7623E-6 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0018700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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