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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0019000 |
| Transcript ID | LotjaGi2g1v0019000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I3T9J0|I3T9J0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0019000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:6991643..6993775) extracted from Lotus japonicus Gifu genome v1.2.
CATAAGCAAAAACTTGTTACTTAATTGAAGTAGCAAGAACCACTAGTAATTAAAAATGAGTTCCAATTCCAAACAAAATC AGCACTCTGTTGAAGTAACAGAGGTTGATGATGCTTACCCCATTGCTCTGTCACTATGTTTCAGTCGAATCTTTCCTGCA ATTTTGAATGCTGCTGTGGATCTCAATTTGTTTGATATCATTGCCAAGGCACAAAAATCAAGTGGTTCAAGCTTGTCTGC TGCTGAAATTGCTTCTCACCTTCCATTTCAACACTCAGAATTGGCCATTAGGCTTGAAAGGACGTTACCTGTGTTGGCTA GTTTTTCTCTGTTAACTTGCTCCATTCGCACCACTGAAGGTGGTAACAGAGAAAGAGTCTATGCTATCTTACCCGTTGGA AAATACTTTATATCCGACAACAATGAAGGCTCTTTTGGTCCCCTCTCCGCCTTAGTGCATCGAGGATATCATGATATTTG GTAATTCAGCATTCAGCACTAATTCATGTACTACTGTTTTTTGAAGACACATGAGACCTATAATTTGTGGCCGTTTCAGT TTCGGACGAACACAAATTACAAAGTTTAATTTTTTTAACAAACTACAATTTGTGATGATCCAAAAGCTGCCACAAATTGT AGGAGACTGGTTGTCTAAGAAAACACCGTTACTCGAATACTTTTTGTTAAGCATGATAAGGTTAACGGTTAAATTAGTCT TTCATCTTGTAAGCGAGTTTAATTTTATTCACTCGACGGAAAAAATGACGTATAGTGGCAGTCATTTTTATAACCACTAG TTATTTTGACCTTACAAACATCATTTTTCCTCCGTAGAATTAAAATCAAACTCTATTATAAAATTAGGGATTAATTTAAC CATTAACCTAGAATTTTATATGACTTTGATAAGTTGGCAATGACTATTTTCTTTTACTTTATTCCCACTACTATTTCTGT TCATATTTCTTTTAATGTACAGGTGAAATTTGGATTTGTATGAATTAAAATGATTTCTTTTTTTCCTTTTCAGGAATGAT GTCAAGGATGCAATTGTCGATCCTAACAACAAAAACCAATTCCAAAATGTCTACGGATTGGAGCCTTTTCAATATATGGA GAAAAATAAAGAGTTGAATCACTTGTTTAACAAAGCCATGGTCCATACTGGCCCATTAGATATGAAACGACTCTTTAAAA TATATAAAGGATTTGAGGGCATATTAACATTGGTTGATGTGGGTGGTGGAGAAGGTCAGGCCTTAAAACAAGTTATCTCT CAATATCCTTCAATAAAAGGAATTAACTTTGATTTGCCTCAAGTGATTCAACATGCATCACCTCATCCAGGTAACAAATG TCATTCTCTCTTTTCATCTACAACCTACAATATATTTAAAAAGTGGAATAATTGATTTTGTAGATAAAAACAAGTGTTTG TATCTAGACAAAATTAACAATTAGAAAGTACTTGTTTTGCTTGAAGGGATAGAACATGTATCGGGAGATATGTTTGAAAG TGTTCCAAAGGGTGATGCCATTTTACTCAAGGTCAGTGAACTACATGAGAGATCATGTTAATATTTTTAATCAAATCAAT ATGATATGATAAAGTTCTAATCACATATTTTTATCATGTGTTTCTTCTGGAATAATTTCAGCGCGTATGTCATAACTGGC CAGATGAAGATTGTGTGAAGTTTTTGAGAAATTGCCATAAAGCTTTGCCTGAGCATGGAAAAATGATTATTGTGGAGTCT ATATATCCAGAAGTTCCAAATTCAAGCACTACATCTCAGTGTGTCAGCCTTATTGACAATGTCATGTTTTTAGTACATGG TGCAAAGGAAAGAACTGCGAATGAATTTCGAAGGTTATGCTCGAGCTCTGGATTTTCCAAATTTTGTTTTTCGGACAATA CTGGTTTCTCATCTGCATTAGGGGTAATGGAGTTTTATAAATAAATGTTATTAAGAATTATCTAGGATTCTTAATACATA ATGCGATTATGTAATCTATTTTTATTTCTTGTTTATTGTCTCGCTTTCCTTATAATGCGCTTGTACGATGTTCAATAACT GTTCTAATAGAATAATTATGTTTTACTCACATAATTTATTTTTTTAGTCCAAA
CDS sequence (LotjaGi2g1v0019000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCCAATTCCAAACAAAATCAGCACTCTGTTGAAGTAACAGAGGTTGATGATGCTTACCCCATTGCTCTGTCACT ATGTTTCAGTCGAATCTTTCCTGCAATTTTGAATGCTGCTGTGGATCTCAATTTGTTTGATATCATTGCCAAGGCACAAA AATCAAGTGGTTCAAGCTTGTCTGCTGCTGAAATTGCTTCTCACCTTCCATTTCAACACTCAGAATTGGCCATTAGGCTT GAAAGGACGTTACCTGTGTTGGCTAGTTTTTCTCTGTTAACTTGCTCCATTCGCACCACTGAAGGTGGTAACAGAGAAAG AGTCTATGCTATCTTACCCGTTGGAAAATACTTTATATCCGACAACAATGAAGGCTCTTTTGGTCCCCTCTCCGCCTTAG TGCATCGAGGATATCATGATATTTGGAATGATGTCAAGGATGCAATTGTCGATCCTAACAACAAAAACCAATTCCAAAAT GTCTACGGATTGGAGCCTTTTCAATATATGGAGAAAAATAAAGAGTTGAATCACTTGTTTAACAAAGCCATGGTCCATAC TGGCCCATTAGATATGAAACGACTCTTTAAAATATATAAAGGATTTGAGGGCATATTAACATTGGTTGATGTGGGTGGTG GAGAAGGTCAGGCCTTAAAACAAGTTATCTCTCAATATCCTTCAATAAAAGGAATTAACTTTGATTTGCCTCAAGTGATT CAACATGCATCACCTCATCCAGGGATAGAACATGTATCGGGAGATATGTTTGAAAGTGTTCCAAAGGGTGATGCCATTTT ACTCAAGCGCGTATGTCATAACTGGCCAGATGAAGATTGTGTGAAGTTTTTGAGAAATTGCCATAAAGCTTTGCCTGAGC ATGGAAAAATGATTATTGTGGAGTCTATATATCCAGAAGTTCCAAATTCAAGCACTACATCTCAGTGTGTCAGCCTTATT GACAATGTCATGTTTTTAGTACATGGTGCAAAGGAAAGAACTGCGAATGAATTTCGAAGGTTATGCTCGAGCTCTGGATT TTCCAAATTTTGTTTTTCGGACAATACTGGTTTCTCATCTGCATTAGGGGTAATGGAGTTTTATAAATAA
Protein sequence (LotjaGi2g1v0019000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSNSKQNQHSVEVTEVDDAYPIALSLCFSRIFPAILNAAVDLNLFDIIAKAQKSSGSSLSAAEIASHLPFQHSELAIRL ERTLPVLASFSLLTCSIRTTEGGNRERVYAILPVGKYFISDNNEGSFGPLSALVHRGYHDIWNDVKDAIVDPNNKNQFQN VYGLEPFQYMEKNKELNHLFNKAMVHTGPLDMKRLFKIYKGFEGILTLVDVGGGEGQALKQVISQYPSIKGINFDLPQVI QHASPHPGIEHVSGDMFESVPKGDAILLKRVCHNWPDEDCVKFLRNCHKALPEHGKMIIVESIYPEVPNSSTTSQCVSLI DNVMFLVHGAKERTANEFRRLCSSSGFSKFCFSDNTGFSSALGVMEFYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 369 | 369 | 8.2E-108 | ||
| PANTHER | 10 | 369 | 360 | 1.7E-178 | – | |
| PANTHER | 10 | 369 | 360 | 1.7E-178 | – | |
| SUPERFAMILY | 16 | 122 | 107 | 1.41E-19 | ||
| ProSiteProfiles | 25 | 369 | 345 | 66.144 | ||
| Gene3D | 31 | 195 | 165 | 3.6E-102 | ||
| Pfam | 36 | 88 | 53 | 2.4E-10 | ||
| SUPERFAMILY | 135 | 355 | 221 | 4.08E-50 | ||
| Pfam | 142 | 348 | 207 | 7.5E-62 | ||
| Gene3D | 177 | 351 | 175 | 3.6E-102 | – | |
| CDD | 207 | 300 | 94 | 1.49382E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0019000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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