Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0026800 |
| Transcript ID | LotjaGi2g1v0026800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT4G25340.1 FK506 BINDING PROTEIN 53; Swiss-Prot: sp|Q93ZG9|FKB53_ARATH Peptidyl-prolyl cis-trans isomerase FKBP53; TrEMBL-Plants: tr|A0A072UIJ4|A0A072UIJ4_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi2g1v0026800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:9034592..9040620) extracted from Lotus japonicus Gifu genome v1.2.
CTCGGTATGAGTGTAAAATAAAAGAGGCGCGAAACATTGGCGCTCCAGGTTTAGGGTTTTACAGCTTTACCTTGGTTTGC GGTACTTTTGAGAGTAAAATAGATTTGTGAGCGCTCAGGGTTTTAGAGTAACGGCGGTGTGTTGCGTTGCGTGACGATGG CGTTTTGGGGTAAGTGAATCGTTTCTGCATTCATTTTGTTCTGATCTCTCAAACATACGATACACACACCAACAATTTGT GATTGCAGGAATTGAAGTAAAACCCGGAAAGCCCTTTACTCACAAATGCGATGACTCCAAAGGTCGCCGCCTCCACATTT CGATGGTAATACTAATACAGTAATACGATTCGATTCCATTGATTACTCATACTTTCTTCTTACCTTTAGTTAGTTAACAT TACTGCATCCATTCTTAGGGCACTTTGGGGTTTGGCACTGCAAACGCAAAAAGCACGTTGCAGTGTAATGTGGGAGATAA GAGCCCTGTGTACGTGTGCTCTCTCTACCCTGGACACACCGAGTCATTGCAACTCAATTTCGAGCTCCACGAAGTTGAAA ATGTTACTTTCTCTGTTATTGGCCCTCGCAGTATTCATCTCTGCGGTTATTATCTTGCCCCTGCCCCATATACCAATGTC GCTGACGATTCGTATCCTTGCTTTTGTTTTTTCTTATGCCTTTTCCTTGTTACCATTTGCTTCTAATAATACTTACTTGA ATAGCATGCCTTTCTAAACATAGAATATAATTAGACATCCATAACTTTTTTTCTTGGTCTGTTTTTCCTTCACCACAACT GAAAGGGAATCATATGGGGTAGATATTGCAAACACAGAGTCAGAGAAATCTGGGAACAATGATGAAGATGATGACACCTA TGAGGATAGTTTTATTGATGATGACAATGATCCAGAAGTTTTTCCACCTTCTCCTATTTCCAACAAAGGCATGTTCCAAT ATTGATGTTTATCCCTCGACAAGCAAACCAATTTTGAATTCCTCAGTAATCTCAATTATTTGCTTGTTTTTTATTGTGAT AGCTGCAGAGGGAGCTTCTTTTGATAGCAGATCAAAAGGTAGGAAAGGCAGCCGTAGACGGCTGAGGAAGAAGTACCAGA CAGTGGGTTCCGATGATGAAAACAGTTTGCATGACCAATTCAAGGATATTGATAATGAAGACATCCTGCCTATTTCATCT TTTTACAAGAATAAAGCCTCTGGAAGGGCCTCAGACCAGGAAATGGATGATAGTGTTGATAAAGGAGCAGGTGATGCTGG TAAAGATGGTGGAAATACTATTACCAAAACAGATTGTGAAACTGACACTGATAATCGGAAATGCGTGTCTAGGTGTCTCT TCTCAACTGAGACCATTCAGATGCCTAGGTGTCTCTTCTCAATTCTCAATCATTGTTCAAATACATGCTTGCTTTTCTCA TTGTTAGTTTTTGGTATTAAACTATTATTTATTATTGACTTTGTTCATAAATTATGTTAAGCAGGGAAGCTGTACTATCA AACAACTTGGTAGGTCCTTGCAATGGTCTGGATGTTGGTGATGTAAACAATTTAAAATCAAAGGGGAAGGAAGAAGAGAA TGAAACACAACAGTATCATAGTGATGATAAGTGAGTGATCCTGTCCTTTTTTTACTCTAGAACTGCACATACATTTACAC GGATGTTTATTATAAGAAACTGTTCTTGATCAATAATATGTTAGTTTTTCATAGGATAACATGTTATACTAATTTGGTGA ATTATGCTGTTATAATTATATAAATGCCATAAAATATCAATCTCAAGAATTTTTGGTTCTTGATTTAGCAGAAATTGAGG ATGGGCAGGTTGCTGTTTATAGCCCTTGCCAAAAAGCCTCTTCCTCTCATACCTCATTTTTTTTCCCCAAGACACGCTTC ATATTCTCAAAATCAAATAATATTGTTGACAATCCTAAACAAATAGTTTTAATTTGAGAAGTTAATTTTGGCAAATGCTA TTTGGAATGTAAGGTGGTTCTCCTTTTGTGTGCTGCATGTGCTAAAATTCACTCTGAAATGTCAAAGACAATGTTCTGGA AAGAAGAGCTAACAATGCCTTTATGTGTACTCCCTTTTATTTTGTTATTTGCAAAAGTTTCTGGTTCGGTTGTTGATATT TTTGTCTTCAATCAAGCAGGGAAACTGAAACTATGATTGAAATACTACCTTCTGCTGAGGTCGGTCAAGGACAGGATGAA AAACCAAAGAAAAAAAGGAAAGGCTGTTCAAAGGAGGAAACGTTTGTTATTGCTTATCGTAATAAGCATCCAGATGAGAA CAATGATCAGGATACAGTTAACGAGTGAGTTTTGCTTTAACTAACTACTGTTTATATATTCTGGTAGTACTTGTATTTTG TACAATAACTTTATGCCCTGGACATATGCAACAGCAATTGACAGAAACATATGTGTTGATGCAACAGAAACACCTGAAAT CGTGCTTATATTAGCAAGGGAAAATTAGGCTGGCCTCCCTAATATAAGTTATTAAGTGAATAAAGACCTATCCATAGTTG AGTAGAAATTATATTCTGTTTGAAATAATGTCTCCCTTTGAATATCTCCCAATCTATTATGTATTTTGTGCTTGAAACTG TGTTTTCTGCAATCTTTGTTAGCACTGTGGTGTTCTTTCCCACCCTTAGGCAGTAGATATGTGAATCAAATTTTCAAATT ACTTTCATAGTCAGTCTGTCATTTCACAATTGAATATCATATGAATCCCTCCAAATCCAATGCTAAAAGAAGGAAAGCTT GAGAAGAAATCCCTCTCAAATAAATTTCTGTTCTTACTTTCATGCTCTGAAACTGTCCTTCCTCCAAAACATTGCTACAT GTTTCTCCACTTCCGTTTTCCCTGTGTAAAATTGTGTTAGATCCTGTCAAAAAGTGATGTTAGAATATAATATAAAACCA TTAATGTGACCCTTACCCAAGAGCTTAAGCTTTTGGGATAAAGTGGTTATTTGACATGGTATCAGAGCCTCTATGACTGA GAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAGTGGAATTTAATTAAGCACATGGTAGGTGGGCCTG TGCATTTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGCGTGTTAGAATATAATATAAAACCATTAATGTGA CCCTTACCCAAGAGCTTAAGCTTTTGGGATAAAGTGGTTATTTGACAAGTGAAAATAAATAATTTTTGTTATCTGATATG CTTTAGCAAATTAGCAGGGATGTTAAGATCTCAGCAATTGTTGCATTGCCCTGCGTTGAAATGGACCGAGATAAGACGCC TAAGAGGAAAAAGAAGGAGAAGGAAAACAAAGATTCACATCTTGAAGGTAACAATGAATGCCATGAAGATATTAGCCAAG ATGACAAAGGAGATCCAAAAGAGTCAGATAATCTGATTCATAAGATTCCTGAAGGAACGGATGAAAAGTAAGCATAGATT TGTTTGGTTTATGCTTTTGATACGAGATAATACTGAACACTCACAAGTGCTTCATTGCTAAAATTGAACGAGTGTAAAAT AGTGAACTATGAATTGGTTAGTTAAATCTTCTTGGTAAACTAGTGAACAATAAACTAGTTTAAACTTTCTCACCACAAGT ATTAAATCTTGTTATACGCCACAACAAGTAGTAAATCTTGTAAATCTCCTTCATGTTAGCAGCATCTGACAAATAATATC TCTAAAATTAAAAAAATCATTTTGAATGAAGCTGTAAATCTTGTTATACATCTTGAGGACAATGAAAAATAATAATAGCT AAAGAAAACTAAATAGAGGGAAAAAGTAGCAACTAACAAGGATGAGAAGAAGTATCTTGTTAATAGTAGTATTAGCTAGA ATATTAAATCAAATTGTTGAAGTTATAGGGTTAGTCTTTTAGGGATAAAGAGCTAGGACAACAAGAAATAATAGAAGTAT ATCAATATTGAGGTGAATGGTTTCTTGGATGTTACTACAAAAGACAGTGGACTAATACATCTTTATATTAATAATAGACT GTTAATCCTAATTAACTAAGGAAACCAATAATGATATATGAGAACTTCAGATGAATGGAAACCAGTCCTAAGAATAATGT AATTTTGTAAGATACTGTAACATATTTTATGACAGAATAATGAGGTATACAGAAGTCCTATGATCTCGCTGCAAGTTTCA AATGCTGTGATGCTTGTCATTATTTAGTTTTTTAACTTTTTTTTGTCATGAGAGTTTGAAAGGGTAGTAGGTATATAGAT CAATATGCAATTGAAGAGAGACTGCTATTCTAATCTAAAAGTCTTGGGGACAAGGACTCACATTAACCTCTCTTGTGAAT TAGCAAAATAATAGAAGAATTGCCTTATCACAGATACAAACTATTGCACGAGTTATGATTCTTTGCTTTGGAATACATTT AAGAAGCAAGGGTTTTTTCTTGGTCAGTATCAATCCAAAATTTTCTGGTTTAGCTGTTTGGTGCCAAGAAACTAATCCTT TTATGGCATTTTCATAATTCAAGTTGTCAGTAGAGAGCACCTTTAATTTGTACCTTACTTTTATCATTCTTGCAAATCCT TAACTTTATGAACTGTTCCATTCACATTTTATTATTTGAGACATTATGCAAGGTGGACAATGGGGACATACTTTAACCTA CTTTGTGAAATCATCTTAGTTAATACTTCTGATGCAGGACTGTAGACGATGGTGCTCTTGACTTTCCTGATGGAAATCAG TCTGAGGATAGAAAAGTCAAGAAAAGGAAAAAGAAGAGTAGAAGTCAGGGGGAAGTTGTAAATTCTGATATGCCTGTATC TGTTGAGCAGAGTAATGAGATGCTGAAAGAGGATGGAAACAAGATAGCTGATGCAAAGCCTTCCCAAGTAAGAACATTGT CAAATGGACTTGTTATTCAAGAGCTAGAGACTGGGACAAAAGATGGCAAAATTGCTGCATTAAGGAAAAAGGTAGTTCTT TTAAATGATTTAAAATAATTTGGTGACTGCCTATATGAAGTCGAACAAAAACAATAGCAAATTTGGTTTGATTAAGTATC TTTTGGTTGCAGATCAGCATCAATTACACTGGAAAGCTGAAAGAAAGTGGGGCAGTATTTGAGTCAAATGCTGACCAAGC TCCTTTCAAATTTCGCCTTGGTAACCCCATTTGCAAAAACCTTCAGTTACATGGATATGGCTCTTGTATTCTTATGTGCA TTACCTTTTGCAGGTAAAGGAGAAGTTATAAAGGGTTGGGATGTTGGCCTTGAAGGTAGTCATTTAGACATTTGATCCTT GTTTTTTTCCCTTATTCAGTTTTTTTTTTATTGAAATATGTTCTTACTATTGAAATGCGCATATATGTACATAATTATAT TCATTGTCCTCAGGCATGCGAGTTGGAGAAAAAAGAAGAGTTGTAATTCCACCATCAATGGCGTATGTGATTGAATTCAT GTGTAACATAATTTTTTATGCTCTAATTTCTTATTTGGGGTCCCTTTAACCTTCTCTGCATATTTCAGGTTTGGGAGTGA TGGACACGGTGCCACAATACCACCAGATTCTTGGTTGGTGTATGATTTCGAGCTGGTTAAAGTGTACTGATTGTGGCTGG AATGTTTTGGGTGCATGGGAAAAAAAAATCTGAGTCGGTCAAAAACCGGATTGAACTATATGATAACAGTTTTTTGTTGT ATCTTCGGTGATTTAGCCATCGATGTGATTAATTTTTTGGTGTAGTGAAGATTGTATATATTGACTAGGGCAGCCAAATC TCTTGTTTTGCTTCTTTCAGATACCAGATTGAACTAAGTAAACATCTAATGACTAGTCACTCACGAGTTTGGCATATCTA ACAGAATTTGTTAGACCTCATACTATTTTGAGCTGTTAGACCTGATATTATTTTGATATACATCAATAGGTCAAGAACTT TAAAATAAACTTTTCTTTGAAGTCTGAGG
CDS sequence (LotjaGi2g1v0026800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTTTGGGGAATTGAAGTAAAACCCGGAAAGCCCTTTACTCACAAATGCGATGACTCCAAAGGTCGCCGCCTCCA CATTTCGATGGGCACTTTGGGGTTTGGCACTGCAAACGCAAAAAGCACGTTGCAGTGTAATGTGGGAGATAAGAGCCCTG TGTACGTGTGCTCTCTCTACCCTGGACACACCGAGTCATTGCAACTCAATTTCGAGCTCCACGAAGTTGAAAATGTTACT TTCTCTGTTATTGGCCCTCGCAGTATTCATCTCTGCGGTTATTATCTTGCCCCTGCCCCATATACCAATGTCGCTGACGA TTCGGAATCATATGGGGTAGATATTGCAAACACAGAGTCAGAGAAATCTGGGAACAATGATGAAGATGATGACACCTATG AGGATAGTTTTATTGATGATGACAATGATCCAGAAGTTTTTCCACCTTCTCCTATTTCCAACAAAGAGGGAGCTTCTTTT GATAGCAGATCAAAAGGTAGGAAAGGCAGCCGTAGACGGCTGAGGAAGAAGTACCAGACAGTGGGTTCCGATGATGAAAA CAGTTTGCATGACCAATTCAAGGATATTGATAATGAAGACATCCTGCCTATTTCATCTTTTTACAAGAATAAAGCCTCTG GAAGGGCCTCAGACCAGGAAATGGATGATAGTGTTGATAAAGGAGCAGGTGATGCTGGTAAAGATGGTGGAAATACTATT ACCAAAACAGATTGTGAAACTGACACTGATAATCGGAAATGCGTGTCTAGGTGTCTCTTCTCAACTGAGACCATTCAGAT GCCTAGGGAAGCTGTACTATCAAACAACTTGGTAGGTCCTTGCAATGGTCTGGATGTTGGTGATGTAAACAATTTAAAAT CAAAGGGGAAGGAAGAAGAGAATGAAACACAACAGTATCATAGTGATGATAAGGAAACTGAAACTATGATTGAAATACTA CCTTCTGCTGAGGTCGGTCAAGGACAGGATGAAAAACCAAAGAAAAAAAGGAAAGGCTGTTCAAAGGAGGAAACGTTTGT TATTGCTTATCGTAATAAGCATCCAGATGAGAACAATGATCAGGATACAGTTAACGAGGATGTTAAGATCTCAGCAATTG TTGCATTGCCCTGCGTTGAAATGGACCGAGATAAGACGCCTAAGAGGAAAAAGAAGGAGAAGGAAAACAAAGATTCACAT CTTGAAGGTAACAATGAATGCCATGAAGATATTAGCCAAGATGACAAAGGAGATCCAAAAGAGTCAGATAATCTGATTCA TAAGATTCCTGAAGGAACGGATGAAAAGACTGTAGACGATGGTGCTCTTGACTTTCCTGATGGAAATCAGTCTGAGGATA GAAAAGTCAAGAAAAGGAAAAAGAAGAGTAGAAGTCAGGGGGAAGTTGTAAATTCTGATATGCCTGTATCTGTTGAGCAG AGTAATGAGATGCTGAAAGAGGATGGAAACAAGATAGCTGATGCAAAGCCTTCCCAAGTAAGAACATTGTCAAATGGACT TGTTATTCAAGAGCTAGAGACTGGGACAAAAGATGGCAAAATTGCTGCATTAAGGAAAAAGATCAGCATCAATTACACTG GAAAGCTGAAAGAAAGTGGGGCAGTATTTGAGTCAAATGCTGACCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAA GTTATAAAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAGTTGGAGAAAAAAGAAGAGTTGTAATTCCACCATCAATGGC GTTTGGGAGTGATGGACACGGTGCCACAATACCACCAGATTCTTGGTTGGTGTATGATTTCGAGCTGGTTAAAGTGTACT GA
Protein sequence (LotjaGi2g1v0026800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFWGIEVKPGKPFTHKCDDSKGRRLHISMGTLGFGTANAKSTLQCNVGDKSPVYVCSLYPGHTESLQLNFELHEVENVT FSVIGPRSIHLCGYYLAPAPYTNVADDSESYGVDIANTESEKSGNNDEDDDTYEDSFIDDDNDPEVFPPSPISNKEGASF DSRSKGRKGSRRRLRKKYQTVGSDDENSLHDQFKDIDNEDILPISSFYKNKASGRASDQEMDDSVDKGAGDAGKDGGNTI TKTDCETDTDNRKCVSRCLFSTETIQMPREAVLSNNLVGPCNGLDVGDVNNLKSKGKEEENETQQYHSDDKETETMIEIL PSAEVGQGQDEKPKKKRKGCSKEETFVIAYRNKHPDENNDQDTVNEDVKISAIVALPCVEMDRDKTPKRKKKEKENKDSH LEGNNECHEDISQDDKGDPKESDNLIHKIPEGTDEKTVDDGALDFPDGNQSEDRKVKKRKKKSRSQGEVVNSDMPVSVEQ SNEMLKEDGNKIADAKPSQVRTLSNGLVIQELETGTKDGKIAALRKKISINYTGKLKESGAVFESNADQAPFKFRLGKGE VIKGWDVGLEGMRVGEKRRVVIPPSMAFGSDGHGATIPPDSWLVYDFELVKVY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 99 | 99 | 1.5E-10 | – | |
| Pfam | 3 | 96 | 94 | 4.2E-16 | ||
| PANTHER | 4 | 612 | 609 | 7.6E-173 | – | |
| PANTHER | 4 | 612 | 609 | 7.6E-173 | – | |
| MobiDBLite | 117 | 194 | 78 | - | – | |
| MobiDBLite | 124 | 142 | 19 | - | – | |
| MobiDBLite | 177 | 194 | 18 | - | – | |
| MobiDBLite | 211 | 247 | 37 | - | – | |
| MobiDBLite | 215 | 230 | 16 | - | – | |
| MobiDBLite | 289 | 341 | 53 | - | – | |
| MobiDBLite | 291 | 317 | 27 | - | – | |
| MobiDBLite | 381 | 475 | 95 | - | – | |
| MobiDBLite | 381 | 454 | 74 | - | – | |
| Gene3D | 474 | 613 | 140 | 3.1E-37 | – | |
| SUPERFAMILY | 484 | 612 | 129 | 1.49E-32 | – | |
| Pfam | 522 | 610 | 89 | 8.2E-26 | ||
| ProSiteProfiles | 525 | 613 | 89 | 27.314 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi2g1v0026800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…