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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0026800 |
| Transcript ID | LotjaGi2g1v0026800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT4G25340.1 FK506 BINDING PROTEIN 53; Swiss-Prot: sp|Q93ZG9|FKB53_ARATH Peptidyl-prolyl cis-trans isomerase FKBP53; TrEMBL-Plants: tr|A0A072UIJ4|A0A072UIJ4_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi2g1v0026800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:9034592..9040620) extracted from Lotus japonicus Gifu genome v1.2.
CTCGGTATGAGTGTAAAATAAAAGAGGCGCGAAACATTGGCGCTCCAGGTTTAGGGTTTTACAGCTTTACCTTGGTTTGC GGTACTTTTGAGAGTAAAATAGATTTGTGAGCGCTCAGGGTTTTAGAGTAACGGCGGTGTGTTGCGTTGCGTGACGATGG CGTTTTGGGGTAAGTGAATCGTTTCTGCATTCATTTTGTTCTGATCTCTCAAACATACGATACACACACCAACAATTTGT GATTGCAGGAATTGAAGTAAAACCCGGAAAGCCCTTTACTCACAAATGCGATGACTCCAAAGGTCGCCGCCTCCACATTT CGATGGTAATACTAATACAGTAATACGATTCGATTCCATTGATTACTCATACTTTCTTCTTACCTTTAGTTAGTTAACAT TACTGCATCCATTCTTAGGGCACTTTGGGGTTTGGCACTGCAAACGCAAAAAGCACGTTGCAGTGTAATGTGGGAGATAA GAGCCCTGTGTACGTGTGCTCTCTCTACCCTGGACACACCGAGTCATTGCAACTCAATTTCGAGCTCCACGAAGTTGAAA ATGTTACTTTCTCTGTTATTGGCCCTCGCAGTATTCATCTCTGCGGTTATTATCTTGCCCCTGCCCCATATACCAATGTC GCTGACGATTCGTATCCTTGCTTTTGTTTTTTCTTATGCCTTTTCCTTGTTACCATTTGCTTCTAATAATACTTACTTGA ATAGCATGCCTTTCTAAACATAGAATATAATTAGACATCCATAACTTTTTTTCTTGGTCTGTTTTTCCTTCACCACAACT GAAAGGGAATCATATGGGGTAGATATTGCAAACACAGAGTCAGAGAAATCTGGGAACAATGATGAAGATGATGACACCTA TGAGGATAGTTTTATTGATGATGACAATGATCCAGAAGTTTTTCCACCTTCTCCTATTTCCAACAAAGGCATGTTCCAAT ATTGATGTTTATCCCTCGACAAGCAAACCAATTTTGAATTCCTCAGTAATCTCAATTATTTGCTTGTTTTTTATTGTGAT AGCTGCAGAGGGAGCTTCTTTTGATAGCAGATCAAAAGGTAGGAAAGGCAGCCGTAGACGGCTGAGGAAGAAGTACCAGA CAGTGGGTTCCGATGATGAAAACAGTTTGCATGACCAATTCAAGGATATTGATAATGAAGACATCCTGCCTATTTCATCT TTTTACAAGAATAAAGCCTCTGGAAGGGCCTCAGACCAGGAAATGGATGATAGTGTTGATAAAGGAGCAGGTGATGCTGG TAAAGATGGTGGAAATACTATTACCAAAACAGATTGTGAAACTGACACTGATAATCGGAAATGCGTGTCTAGGTGTCTCT TCTCAACTGAGACCATTCAGATGCCTAGGTGTCTCTTCTCAATTCTCAATCATTGTTCAAATACATGCTTGCTTTTCTCA TTGTTAGTTTTTGGTATTAAACTATTATTTATTATTGACTTTGTTCATAAATTATGTTAAGCAGGGAAGCTGTACTATCA AACAACTTGGTAGGTCCTTGCAATGGTCTGGATGTTGGTGATGTAAACAATTTAAAATCAAAGGGGAAGGAAGAAGAGAA TGAAACACAACAGTATCATAGTGATGATAAGTGAGTGATCCTGTCCTTTTTTTACTCTAGAACTGCACATACATTTACAC GGATGTTTATTATAAGAAACTGTTCTTGATCAATAATATGTTAGTTTTTCATAGGATAACATGTTATACTAATTTGGTGA ATTATGCTGTTATAATTATATAAATGCCATAAAATATCAATCTCAAGAATTTTTGGTTCTTGATTTAGCAGAAATTGAGG ATGGGCAGGTTGCTGTTTATAGCCCTTGCCAAAAAGCCTCTTCCTCTCATACCTCATTTTTTTTCCCCAAGACACGCTTC ATATTCTCAAAATCAAATAATATTGTTGACAATCCTAAACAAATAGTTTTAATTTGAGAAGTTAATTTTGGCAAATGCTA TTTGGAATGTAAGGTGGTTCTCCTTTTGTGTGCTGCATGTGCTAAAATTCACTCTGAAATGTCAAAGACAATGTTCTGGA AAGAAGAGCTAACAATGCCTTTATGTGTACTCCCTTTTATTTTGTTATTTGCAAAAGTTTCTGGTTCGGTTGTTGATATT TTTGTCTTCAATCAAGCAGGGAAACTGAAACTATGATTGAAATACTACCTTCTGCTGAGGTCGGTCAAGGACAGGATGAA AAACCAAAGAAAAAAAGGAAAGGCTGTTCAAAGGAGGAAACGTTTGTTATTGCTTATCGTAATAAGCATCCAGATGAGAA CAATGATCAGGATACAGTTAACGAGTGAGTTTTGCTTTAACTAACTACTGTTTATATATTCTGGTAGTACTTGTATTTTG TACAATAACTTTATGCCCTGGACATATGCAACAGCAATTGACAGAAACATATGTGTTGATGCAACAGAAACACCTGAAAT CGTGCTTATATTAGCAAGGGAAAATTAGGCTGGCCTCCCTAATATAAGTTATTAAGTGAATAAAGACCTATCCATAGTTG AGTAGAAATTATATTCTGTTTGAAATAATGTCTCCCTTTGAATATCTCCCAATCTATTATGTATTTTGTGCTTGAAACTG TGTTTTCTGCAATCTTTGTTAGCACTGTGGTGTTCTTTCCCACCCTTAGGCAGTAGATATGTGAATCAAATTTTCAAATT ACTTTCATAGTCAGTCTGTCATTTCACAATTGAATATCATATGAATCCCTCCAAATCCAATGCTAAAAGAAGGAAAGCTT GAGAAGAAATCCCTCTCAAATAAATTTCTGTTCTTACTTTCATGCTCTGAAACTGTCCTTCCTCCAAAACATTGCTACAT GTTTCTCCACTTCCGTTTTCCCTGTGTAAAATTGTGTTAGATCCTGTCAAAAAGTGATGTTAGAATATAATATAAAACCA TTAATGTGACCCTTACCCAAGAGCTTAAGCTTTTGGGATAAAGTGGTTATTTGACATGGTATCAGAGCCTCTATGACTGA GAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAGTGGAATTTAATTAAGCACATGGTAGGTGGGCCTG TGCATTTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGCGTGTTAGAATATAATATAAAACCATTAATGTGA CCCTTACCCAAGAGCTTAAGCTTTTGGGATAAAGTGGTTATTTGACAAGTGAAAATAAATAATTTTTGTTATCTGATATG CTTTAGCAAATTAGCAGGGATGTTAAGATCTCAGCAATTGTTGCATTGCCCTGCGTTGAAATGGACCGAGATAAGACGCC TAAGAGGAAAAAGAAGGAGAAGGAAAACAAAGATTCACATCTTGAAGGTAACAATGAATGCCATGAAGATATTAGCCAAG ATGACAAAGGAGATCCAAAAGAGTCAGATAATCTGATTCATAAGATTCCTGAAGGAACGGATGAAAAGTAAGCATAGATT TGTTTGGTTTATGCTTTTGATACGAGATAATACTGAACACTCACAAGTGCTTCATTGCTAAAATTGAACGAGTGTAAAAT AGTGAACTATGAATTGGTTAGTTAAATCTTCTTGGTAAACTAGTGAACAATAAACTAGTTTAAACTTTCTCACCACAAGT ATTAAATCTTGTTATACGCCACAACAAGTAGTAAATCTTGTAAATCTCCTTCATGTTAGCAGCATCTGACAAATAATATC TCTAAAATTAAAAAAATCATTTTGAATGAAGCTGTAAATCTTGTTATACATCTTGAGGACAATGAAAAATAATAATAGCT AAAGAAAACTAAATAGAGGGAAAAAGTAGCAACTAACAAGGATGAGAAGAAGTATCTTGTTAATAGTAGTATTAGCTAGA ATATTAAATCAAATTGTTGAAGTTATAGGGTTAGTCTTTTAGGGATAAAGAGCTAGGACAACAAGAAATAATAGAAGTAT ATCAATATTGAGGTGAATGGTTTCTTGGATGTTACTACAAAAGACAGTGGACTAATACATCTTTATATTAATAATAGACT GTTAATCCTAATTAACTAAGGAAACCAATAATGATATATGAGAACTTCAGATGAATGGAAACCAGTCCTAAGAATAATGT AATTTTGTAAGATACTGTAACATATTTTATGACAGAATAATGAGGTATACAGAAGTCCTATGATCTCGCTGCAAGTTTCA AATGCTGTGATGCTTGTCATTATTTAGTTTTTTAACTTTTTTTTGTCATGAGAGTTTGAAAGGGTAGTAGGTATATAGAT CAATATGCAATTGAAGAGAGACTGCTATTCTAATCTAAAAGTCTTGGGGACAAGGACTCACATTAACCTCTCTTGTGAAT TAGCAAAATAATAGAAGAATTGCCTTATCACAGATACAAACTATTGCACGAGTTATGATTCTTTGCTTTGGAATACATTT AAGAAGCAAGGGTTTTTTCTTGGTCAGTATCAATCCAAAATTTTCTGGTTTAGCTGTTTGGTGCCAAGAAACTAATCCTT TTATGGCATTTTCATAATTCAAGTTGTCAGTAGAGAGCACCTTTAATTTGTACCTTACTTTTATCATTCTTGCAAATCCT TAACTTTATGAACTGTTCCATTCACATTTTATTATTTGAGACATTATGCAAGGTGGACAATGGGGACATACTTTAACCTA CTTTGTGAAATCATCTTAGTTAATACTTCTGATGCAGGACTGTAGACGATGGTGCTCTTGACTTTCCTGATGGAAATCAG TCTGAGGATAGAAAAGTCAAGAAAAGGAAAAAGAAGAGTAGAAGTCAGGGGGAAGTTGTAAATTCTGATATGCCTGTATC TGTTGAGCAGAGTAATGAGATGCTGAAAGAGGATGGAAACAAGATAGCTGATGCAAAGCCTTCCCAAGTAAGAACATTGT CAAATGGACTTGTTATTCAAGAGCTAGAGACTGGGACAAAAGATGGCAAAATTGCTGCATTAAGGAAAAAGGTAGTTCTT TTAAATGATTTAAAATAATTTGGTGACTGCCTATATGAAGTCGAACAAAAACAATAGCAAATTTGGTTTGATTAAGTATC TTTTGGTTGCAGATCAGCATCAATTACACTGGAAAGCTGAAAGAAAGTGGGGCAGTATTTGAGTCAAATGCTGACCAAGC TCCTTTCAAATTTCGCCTTGGTAACCCCATTTGCAAAAACCTTCAGTTACATGGATATGGCTCTTGTATTCTTATGTGCA TTACCTTTTGCAGGTAAAGGAGAAGTTATAAAGGGTTGGGATGTTGGCCTTGAAGGTAGTCATTTAGACATTTGATCCTT GTTTTTTTCCCTTATTCAGTTTTTTTTTTATTGAAATATGTTCTTACTATTGAAATGCGCATATATGTACATAATTATAT TCATTGTCCTCAGGCATGCGAGTTGGAGAAAAAAGAAGAGTTGTAATTCCACCATCAATGGCGTATGTGATTGAATTCAT GTGTAACATAATTTTTTATGCTCTAATTTCTTATTTGGGGTCCCTTTAACCTTCTCTGCATATTTCAGGTTTGGGAGTGA TGGACACGGTGCCACAATACCACCAGATTCTTGGTTGGTGTATGATTTCGAGCTGGTTAAAGTGTACTGATTGTGGCTGG AATGTTTTGGGTGCATGGGAAAAAAAAATCTGAGTCGGTCAAAAACCGGATTGAACTATATGATAACAGTTTTTTGTTGT ATCTTCGGTGATTTAGCCATCGATGTGATTAATTTTTTGGTGTAGTGAAGATTGTATATATTGACTAGGGCAGCCAAATC TCTTGTTTTGCTTCTTTCAGATACCAGATTGAACTAAGTAAACATCTAATGACTAGTCACTCACGAGTTTGGCATATCTA ACAGAATTTGTTAGACCTCATACTATTTTGAGCTGTTAGACCTGATATTATTTTGATATACATCAATAGGTCAAGAACTT TAAAATAAACTTTTCTTTGAAGTCTGAGG
CDS sequence (LotjaGi2g1v0026800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTTTGGGGAATTGAAGTAAAACCCGGAAAGCCCTTTACTCACAAATGCGATGACTCCAAAGGTCGCCGCCTCCA CATTTCGATGGGCACTTTGGGGTTTGGCACTGCAAACGCAAAAAGCACGTTGCAGTGTAATGTGGGAGATAAGAGCCCTG TGTACGTGTGCTCTCTCTACCCTGGACACACCGAGTCATTGCAACTCAATTTCGAGCTCCACGAAGTTGAAAATGTTACT TTCTCTGTTATTGGCCCTCGCAGTATTCATCTCTGCGGTTATTATCTTGCCCCTGCCCCATATACCAATGTCGCTGACGA TTCGGAATCATATGGGGTAGATATTGCAAACACAGAGTCAGAGAAATCTGGGAACAATGATGAAGATGATGACACCTATG AGGATAGTTTTATTGATGATGACAATGATCCAGAAGTTTTTCCACCTTCTCCTATTTCCAACAAAGCTGCAGAGGGAGCT TCTTTTGATAGCAGATCAAAAGGTAGGAAAGGCAGCCGTAGACGGCTGAGGAAGAAGTACCAGACAGTGGGTTCCGATGA TGAAAACAGTTTGCATGACCAATTCAAGGATATTGATAATGAAGACATCCTGCCTATTTCATCTTTTTACAAGAATAAAG CCTCTGGAAGGGCCTCAGACCAGGAAATGGATGATAGTGTTGATAAAGGAGCAGGTGATGCTGGTAAAGATGGTGGAAAT ACTATTACCAAAACAGATTGTGAAACTGACACTGATAATCGGAAATGCGTGTCTAGGTGTCTCTTCTCAACTGAGACCAT TCAGATGCCTAGGGAAGCTGTACTATCAAACAACTTGGTAGGTCCTTGCAATGGTCTGGATGTTGGTGATGTAAACAATT TAAAATCAAAGGGGAAGGAAGAAGAGAATGAAACACAACAGTATCATAGTGATGATAAGGAAACTGAAACTATGATTGAA ATACTACCTTCTGCTGAGGTCGGTCAAGGACAGGATGAAAAACCAAAGAAAAAAAGGAAAGGCTGTTCAAAGGAGGAAAC GTTTGTTATTGCTTATCGTAATAAGCATCCAGATGAGAACAATGATCAGGATACAGTTAACGAGGATGTTAAGATCTCAG CAATTGTTGCATTGCCCTGCGTTGAAATGGACCGAGATAAGACGCCTAAGAGGAAAAAGAAGGAGAAGGAAAACAAAGAT TCACATCTTGAAGGTAACAATGAATGCCATGAAGATATTAGCCAAGATGACAAAGGAGATCCAAAAGAGTCAGATAATCT GATTCATAAGATTCCTGAAGGAACGGATGAAAAGACTGTAGACGATGGTGCTCTTGACTTTCCTGATGGAAATCAGTCTG AGGATAGAAAAGTCAAGAAAAGGAAAAAGAAGAGTAGAAGTCAGGGGGAAGTTGTAAATTCTGATATGCCTGTATCTGTT GAGCAGAGTAATGAGATGCTGAAAGAGGATGGAAACAAGATAGCTGATGCAAAGCCTTCCCAAGTAAGAACATTGTCAAA TGGACTTGTTATTCAAGAGCTAGAGACTGGGACAAAAGATGGCAAAATTGCTGCATTAAGGAAAAAGATCAGCATCAATT ACACTGGAAAGCTGAAAGAAAGTGGGGCAGTATTTGAGTCAAATGCTGACCAAGCTCCTTTCAAATTTCGCCTTGGTAAA GGAGAAGTTATAAAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAGTTGGAGAAAAAAGAAGAGTTGTAATTCCACCATC AATGGCGTTTGGGAGTGATGGACACGGTGCCACAATACCACCAGATTCTTGGTTGGTGTATGATTTCGAGCTGGTTAAAG TGTACTGA
Protein sequence (LotjaGi2g1v0026800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFWGIEVKPGKPFTHKCDDSKGRRLHISMGTLGFGTANAKSTLQCNVGDKSPVYVCSLYPGHTESLQLNFELHEVENVT FSVIGPRSIHLCGYYLAPAPYTNVADDSESYGVDIANTESEKSGNNDEDDDTYEDSFIDDDNDPEVFPPSPISNKAAEGA SFDSRSKGRKGSRRRLRKKYQTVGSDDENSLHDQFKDIDNEDILPISSFYKNKASGRASDQEMDDSVDKGAGDAGKDGGN TITKTDCETDTDNRKCVSRCLFSTETIQMPREAVLSNNLVGPCNGLDVGDVNNLKSKGKEEENETQQYHSDDKETETMIE ILPSAEVGQGQDEKPKKKRKGCSKEETFVIAYRNKHPDENNDQDTVNEDVKISAIVALPCVEMDRDKTPKRKKKEKENKD SHLEGNNECHEDISQDDKGDPKESDNLIHKIPEGTDEKTVDDGALDFPDGNQSEDRKVKKRKKKSRSQGEVVNSDMPVSV EQSNEMLKEDGNKIADAKPSQVRTLSNGLVIQELETGTKDGKIAALRKKISINYTGKLKESGAVFESNADQAPFKFRLGK GEVIKGWDVGLEGMRVGEKRRVVIPPSMAFGSDGHGATIPPDSWLVYDFELVKVY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 99 | 99 | 1.5E-10 | – | |
| Pfam | 3 | 96 | 94 | 4.2E-16 | ||
| PANTHER | 4 | 614 | 611 | 1.4E-173 | – | |
| PANTHER | 4 | 614 | 611 | 1.4E-173 | – | |
| MobiDBLite | 117 | 194 | 78 | - | – | |
| MobiDBLite | 124 | 142 | 19 | - | – | |
| MobiDBLite | 179 | 194 | 16 | - | – | |
| MobiDBLite | 213 | 237 | 25 | - | – | |
| MobiDBLite | 217 | 232 | 16 | - | – | |
| MobiDBLite | 291 | 315 | 25 | - | – | |
| MobiDBLite | 293 | 315 | 23 | - | – | |
| MobiDBLite | 323 | 342 | 20 | - | – | |
| MobiDBLite | 383 | 456 | 74 | - | – | |
| MobiDBLite | 383 | 477 | 95 | - | – | |
| Gene3D | 476 | 615 | 140 | 3.1E-37 | – | |
| SUPERFAMILY | 486 | 614 | 129 | 1.51E-32 | – | |
| Pfam | 524 | 612 | 89 | 8.2E-26 | ||
| ProSiteProfiles | 527 | 615 | 89 | 27.314 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi2g1v0026800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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