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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0061800 |
| Transcript ID | LotjaGi2g1v0061800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cationic amino acid transporter; TAIR: AT4G21120.1 amino acid transporter 1; Swiss-Prot: sp|Q84MA5|CAAT1_ARATH Cationic amino acid transporter 1; TrEMBL-Plants: tr|K7LDD5|K7LDD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0061800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:13517793..13520471) extracted from Lotus japonicus Gifu genome v1.2.
TGGAAATTCCAACTTAGCAGCAGAAGATGTTGTCCCTTCACCAATAAAGTTGAAGTCATTTGAGAACTTATCCAGCTATG GAAGAGCACTCTTGCACACCCCATTTAGACTTGTGGATCGGGTCTTGGCCCGATCCATGGATGAAGTGGAGTTGGTGGAG GTGAAGAAACGAAGTCAGCATGAGATGAAGAAAACACTCACATGGTGGGATTTGATGTGGTTTGGTTTGGGCAGTGTCAT TGGTTCTGGCATTTTTGTCCTCACAGGGCTTGAGGTGAAGGGAACTGTGGGACCTGCCGTGGTGATATCCTATGTTATCT CAGGCATCTCTGCCATGCTTTCTGTCTTTTGCTACACTGAGTTTGCTGTGGAAATCCCTGTGGCTGGTATGTATTTTTCT TTGGTATCTTTCAATTAAGTTTAGTGCAGACAAAGAAAATGTTAGTGTTTCTGATTTTAGAGTTTTAAAATCTACTAATG ATTGTTTAATAGAAAGTTATAAGAGAGAAGTTTTTCTTCAAATAATGATTTTGAACTTTCTAAATGCCAATAATCTCTTT ACACTTTTTTGGTTATTTGATGTTTGAAATAATTTGATCCTAGTAGTAGATTTTTCTTTTCCATGTTAATTTGAAGATTA CGATCTAGTATGTCCCAGATTTCTTTTTATCCATGTTGCACCTTAGTTTCTTGTTGAACTAGAGCTAATTGAACATACTT TATACAGATTAACAGATTGTGAAGGCTACATGGTACTTGAATAATTTGTACTTGGATGAAATTATAGTTAACTAAAAACT TATTGCAAACATTGAATGTTGATTTCATGCTCCTAGGTGGTTCCTTTGCTTATATCAGAGTGGAGCTTGGTGAATTTTTC GCCTTCATAGCTTCAGGAAATATTCTCCTCGAGTATGTAATCGGCGGCGCTGCAGTGGCACGCTCATGGACATCCTACTT TGCCACCCTATGCAACCAAGAGTCCGACAAGTTTCTCATCCAAACCCATGGCCTTGCAAAAAACTACAACCAGCTTGACC CCATTGCTGTTGTAGTTCTAGCTGTTATTTGTGTCTTTGCTATTTCAAGCACAAAGGGCTCCTCACGTTTCAACTACATT GCTTCAATTATTCATGTTCTTGTCCTCTTATTCATCATAGTTGCTGGGTTAACCAAAGCCAAAGCAGAGAACTACTCCGA CTTTGCCCCTTTTGGTGCAAGAGGAATCTTCCAATCTGCTGCAGTTTTGTTCTTTGCTTACATTGGATTTGATGCAGTTT CAACAATGGCAGAAGAAACAAAGAACCCTGGAAGAGACATACCTATTGGTCTTATTGCCTCAATGACTTTGACAACATTT TTATACTGCATGTTAGCTGTGACACTCTGTTTGATGCAGAAATACACTCAGGTCAGTGACAGAACTGTGTTAAGAAATTG GGGTTGATGTTTTTCAAGAGAATTTGTTTCTTAAAATGTTAGGGGATGTTTGACTACTGATTTGTAAAACAGTTTTCAGT GTTTTTTTTTTTTTTAATTGTTTGATGCGAATAATTTTAACTTATGGGGGTTGACGTTTTATAATTGTTTTTAAAATTAA ATTCCTAAAACATTTAAGCGATTTTTTAACTTATGTTTTTAGGTTTCAGGTCATGGCTGGTTGTTCAGCTTGGCGAAACA TATTGTCCAAACTGTTTTTTTAAATGTTCTAATAATCAGGTTTTTAAAATTGTTTCCAAAATCAGTTTTGAAATTTAGAA AAACGAGAAGGGAATTAATATTATCACTTTTAATTAGTCATAGTTAATTTTGCTTAATGTGCTAAATTTTTCTGGTCCTG TCCTCACTCAGGTTGATGAGAGTGCAGCTTTCTCAGTAGCATTTGAAGCTGTTGGGATGAGTTGGGCTAAGTACATTGTT GCATTTGGAGCACTAAAAGGAATGACTAGTGTTCTCCTTGTTGGAGCAGTGGGTCAAGCAAGGTACCTCACACACATTGC AAGAACCCACTTGTTGCCCTCCTGGTTTGCAAGAGTGAATGAAAGAACTGGAACACCCATCAATGCCACAATTGTAATGA CTTTTGCCACTGCTATTGTTGCATTTTTCACTAGCCTTGATGTTCTTGCCAATCTTCTTTCGATTTCTACTCTATTCTTG TTTTCCCTTGTGGCCTTGGCTCTCTTGGTTCGCCGCTATTGTGCCAGAGGAGTGACTACAAGGTTTAACATTGGGAAATT CATTTGCTGCATTGTTCTCATCATAGGCTCTTCAATTGGCTCTGCAATTTACTGGTCCAAAACCACAAACTGGATTGGTT TTGCTATTTTAGTACCTCTTTGGTTTTTGGGAACAATTGGGATTTGGATTTTGGTTCCACTTGCAAAGAAGCCAAAGATT TGGGGTGTTCCACTGGTTCCATTCTTGCCATCAGCATCAATTGGCATCAACATTTTCCTTCTTGGAACATTGGATAAGGA TTCATTTAGAAGATTTGGATTGTGGACTGCATTTTTGGTGGTGTATTACCTACTTGTAGGATTACATGCATCTTATGACG TAGCAAATACACAAAATGAAAAGGGGAAACTAGATATCAATACTGAGACAAATTTGGATGAAGAAAATGGTGTTTCATTG GTGATGGGATCTAGTCCAAAAAATGAAAATCATATGTAG
CDS sequence (LotjaGi2g1v0061800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAAGTGGAGTTGGTGGAGGTGAAGAAACGAAGTCAGCATGAGATGAAGAAAACACTCACATGGTGGGATTTGAT GTGGTTTGGTTTGGGCAGTGTCATTGGTTCTGGCATTTTTGTCCTCACAGGGCTTGAGGTGAAGGGAACTGTGGGACCTG CCGTGGTGATATCCTATGTTATCTCAGGCATCTCTGCCATGCTTTCTGTCTTTTGCTACACTGAGTTTGCTGTGGAAATC CCTGTGGCTGGTGGTTCCTTTGCTTATATCAGAGTGGAGCTTGGTGAATTTTTCGCCTTCATAGCTTCAGGAAATATTCT CCTCGAGTATGTAATCGGCGGCGCTGCAGTGGCACGCTCATGGACATCCTACTTTGCCACCCTATGCAACCAAGAGTCCG ACAAGTTTCTCATCCAAACCCATGGCCTTGCAAAAAACTACAACCAGCTTGACCCCATTGCTGTTGTAGTTCTAGCTGTT ATTTGTGTCTTTGCTATTTCAAGCACAAAGGGCTCCTCACGTTTCAACTACATTGCTTCAATTATTCATGTTCTTGTCCT CTTATTCATCATAGTTGCTGGGTTAACCAAAGCCAAAGCAGAGAACTACTCCGACTTTGCCCCTTTTGGTGCAAGAGGAA TCTTCCAATCTGCTGCAGTTTTGTTCTTTGCTTACATTGGATTTGATGCAGTTTCAACAATGGCAGAAGAAACAAAGAAC CCTGGAAGAGACATACCTATTGGTCTTATTGCCTCAATGACTTTGACAACATTTTTATACTGCATGTTAGCTGTGACACT CTGTTTGATGCAGAAATACACTCAGGTTGATGAGAGTGCAGCTTTCTCAGTAGCATTTGAAGCTGTTGGGATGAGTTGGG CTAAGTACATTGTTGCATTTGGAGCACTAAAAGGAATGACTAGTGTTCTCCTTGTTGGAGCAGTGGGTCAAGCAAGGTAC CTCACACACATTGCAAGAACCCACTTGTTGCCCTCCTGGTTTGCAAGAGTGAATGAAAGAACTGGAACACCCATCAATGC CACAATTGTAATGACTTTTGCCACTGCTATTGTTGCATTTTTCACTAGCCTTGATGTTCTTGCCAATCTTCTTTCGATTT CTACTCTATTCTTGTTTTCCCTTGTGGCCTTGGCTCTCTTGGTTCGCCGCTATTGTGCCAGAGGAGTGACTACAAGGTTT AACATTGGGAAATTCATTTGCTGCATTGTTCTCATCATAGGCTCTTCAATTGGCTCTGCAATTTACTGGTCCAAAACCAC AAACTGGATTGGTTTTGCTATTTTAGTACCTCTTTGGTTTTTGGGAACAATTGGGATTTGGATTTTGGTTCCACTTGCAA AGAAGCCAAAGATTTGGGGTGTTCCACTGGTTCCATTCTTGCCATCAGCATCAATTGGCATCAACATTTTCCTTCTTGGA ACATTGGATAAGGATTCATTTAGAAGATTTGGATTGTGGACTGCATTTTTGGTGGTGTATTACCTACTTGTAGGATTACA TGCATCTTATGACGTAGCAAATACACAAAATGAAAAGGGGAAACTAGATATCAATACTGAGACAAATTTGGATGAAGAAA ATGGTGTTTCATTGGTGATGGGATCTAGTCCAAAAAATGAAAATCATATGTAG
Protein sequence (LotjaGi2g1v0061800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEVELVEVKKRSQHEMKKTLTWWDLMWFGLGSVIGSGIFVLTGLEVKGTVGPAVVISYVISGISAMLSVFCYTEFAVEI PVAGGSFAYIRVELGEFFAFIASGNILLEYVIGGAAVARSWTSYFATLCNQESDKFLIQTHGLAKNYNQLDPIAVVVLAV ICVFAISSTKGSSRFNYIASIIHVLVLLFIIVAGLTKAKAENYSDFAPFGARGIFQSAAVLFFAYIGFDAVSTMAEETKN PGRDIPIGLIASMTLTTFLYCMLAVTLCLMQKYTQVDESAAFSVAFEAVGMSWAKYIVAFGALKGMTSVLLVGAVGQARY LTHIARTHLLPSWFARVNERTGTPINATIVMTFATAIVAFFTSLDVLANLLSISTLFLFSLVALALLVRRYCARGVTTRF NIGKFICCIVLIIGSSIGSAIYWSKTTNWIGFAILVPLWFLGTIGIWILVPLAKKPKIWGVPLVPFLPSASIGINIFLLG TLDKDSFRRFGLWTAFLVVYYLLVGLHASYDVANTQNEKGKLDINTETNLDEENGVSLVMGSSPKNENHM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 2 | 520 | 519 | 6.0E-289 | – | |
| PANTHER | 2 | 520 | 519 | 6.0E-289 | – | |
| PIRSF | 5 | 461 | 457 | 7.4E-69 | – | |
| Gene3D | 15 | 449 | 435 | 3.1E-103 | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 21 | 42 | 22 | - | – | |
| Pfam | 21 | 395 | 375 | 7.1E-47 | ||
| Phobius | 43 | 53 | 11 | - | – | |
| TMHMM | 52 | 74 | 23 | - | – | |
| Phobius | 54 | 76 | 23 | - | – | |
| Phobius | 77 | 96 | 20 | - | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 97 | 118 | 22 | - | – | |
| Phobius | 119 | 149 | 31 | - | – | |
| Phobius | 150 | 168 | 19 | - | – | |
| TMHMM | 150 | 167 | 18 | - | – | |
| Phobius | 169 | 174 | 6 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 175 | 194 | 20 | - | – | |
| Phobius | 195 | 213 | 19 | - | – | |
| TMHMM | 206 | 228 | 23 | - | – | |
| Phobius | 214 | 235 | 22 | - | – | |
| Phobius | 236 | 246 | 11 | - | – | |
| Phobius | 247 | 273 | 27 | - | – | |
| TMHMM | 248 | 270 | 23 | - | – | |
| Phobius | 274 | 292 | 19 | - | – | |
| Phobius | 293 | 316 | 24 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 317 | 344 | 28 | - | – | |
| TMHMM | 342 | 361 | 20 | - | – | |
| Phobius | 345 | 364 | 20 | - | – | |
| Phobius | 365 | 369 | 5 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 370 | 388 | 19 | - | – | |
| Phobius | 389 | 399 | 11 | - | – | |
| Phobius | 400 | 423 | 24 | - | – | |
| TMHMM | 401 | 423 | 23 | - | – | |
| Phobius | 424 | 428 | 5 | - | – | |
| Phobius | 429 | 452 | 24 | - | – | |
| TMHMM | 429 | 451 | 23 | - | – | |
| PIRSF | 439 | 531 | 93 | 33.0 | – | |
| Phobius | 453 | 458 | 6 | - | – | |
| TMHMM | 458 | 480 | 23 | - | – | |
| Phobius | 459 | 478 | 20 | - | – | |
| Pfam | 459 | 509 | 51 | 2.6E-14 | ||
| Phobius | 479 | 489 | 11 | - | – | |
| Phobius | 490 | 510 | 21 | - | – | |
| TMHMM | 490 | 509 | 20 | - | – | |
| Phobius | 511 | 550 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0061800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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