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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0065900 |
| Transcript ID | LotjaGi2g1v0065900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT5G20930.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q39238|TSL_ARATH Serine/threonine-protein kinase TOUSLED; TrEMBL-Plants: tr|W9R7F0|W9R7F0_9ROSA Serine/threonine-protein kinase TOUSLED; Found in the gene: LotjaGi2g1v0065900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:15446163..15448263) extracted from Lotus japonicus Gifu genome v1.2.
AGACTATCTTGTATAATATTATTCTGCTCACTTTGTTAATGGTTTATGTTTTATTTTTGTTTGGACCTTTTCTCCGGTTG AAGATAAGGGTGATGGAACAGAAGTGGAGGCTGGACTAGCAGAAGATGTTCTCATCCATGAGGAAATCTATAAGTCTCGA CTAGCTAGCATTAAACGAGTAAGGGGATACTTCTGCTTGTCTTAATATTCCATTTCCTCTATGTTTCTAATAGCACAAAA AATTTCAGGAGGAAGAAACTATTTTGCGGGAGAGGGATCGCTACGAACTGGAGAAAGGGAGGTTGATTCGTGAAATGAAA CGCATACGGGATGAAGATGGTTCACGGTTTAACAATTTTCAGATTCTAAATCATCGTTATGCCCTTCTAAACCTTCTTGG GAAGGGGGGTTTTAGTGAGGTGTACAAGGTCAGAATTTCTCTAAAGTATAATGATTATAGTAATCATTTTGCCATATTGA TATTATTTAGCAAATAATATACAAGGTTTTGAGCTACTGTAACCAGAATCTAGATAGATCCTTCGCCTATATCGGCAATT GTAAATATATACCTTTTTCCAGTGATTTGAAGTATGATATTTCCAGCAGGCTTTTGACATGGTGGAGCATAGATACGTTG CATGCAAGCTGCATGGTTTAAATGCTCAATGGAGTGAGGAGAAGAAGCAAAGTTACATACGACACGCAATTCGTGAATAT AACATTCACAAGACCCTAGTCCATCGTCACATTGTTCGGTTATGGGACATCTTTGAGATCGATCATAATACATTCTGTAC TGTTCTAGAGTACTGTAGTGGTATATATGCTTAATCCTTTTTATGAAGATCATTACTTTGTTTATTTTTGTCAGAGTTCA AGAGAGAAATTTCATGAAATATAATTTCTGATTTCATTAACTCAGTAACTAACTGATAACTACCCATGTGACCAATTGAC AGTTGACTTGTAACAGGCTAACAGCTCAATTAATACTAACGGAAACTATAATTCCGTATAATGAGAGTATAGTAATTGTA TACGCCAACAATTTTTGTGATATAGACTATAAATATTAATTTGGACTTGAATGACTTCTTGGTTTTTGTTTGAGTTGCTG TCCACCCCTTCTCACTTTGATCCTCCTTTATTCTTCCAGGGAAGGATCTTGATGGTGTCCTTAAAGCAACTCCTATATTG CCTGAGAGGGAGGCTAGGGTCATTCTAGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACACAGAAGATTAT TCATTATGATTTAAAACCAGGAAATGTTCTGTTTGATGAGCTCGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGA TAGTGGAGGATGATGTGGGATCCCAGGGCATGGAACTTACATCCCAGGGAGCTGGAACATATTGGTACATGGTTACTCGT GAAGATCATTGTTACTAGATTTCTAAATTTTGAACTACTTGAACTTTGATTCTCCTTTCATGTTTCCATGAGCTTCCAAC ATTGACTTTGGCCAAACCTATTCATGCCTCCTCTTCCTTTTGACCTTGTAGGTATTTGCCTCCTGAATGCTTTGAGCTCA GCAAGACACCTCTTATATCATCAAAGGTCAACAATTTTCCAAGTTGTAAATAAGTTATTCTTTTATTTGGGTTATCACTT CGCATTTTCTCTGCCATTCGGTGTAACGATATTTCACTTTAAGTCATGATGGCTGGGATTGTGCAAAAAACCATGTCTGG ATTTGGTTTGCATAATCAGTAATCACCTTACATTTCTGACTTTGTTTTGGGAAACAGGTTGATGTCTGGTCTGCTGGTAT TTTGTTCTATCAAATGCTGTTTGGAAAACGTCCTTTCGGACATGACCAAACACAGGAAAGAATACTTCGTGAAGACACAA TCATTAAGGCGCGCAAGGTTGAGTTTCCTCCGCGACCTGCTGTTTCTAATGAGGCAAAGGTGAGTTGCACCCTTTTTCTG ATAATTGCTGCCAATGGCTGATTGTTCCTCGGACATCTTTCATTTACTTATATCATTCTAATATTCAGCGATACACAGAA TCTTTGCTTCTTGTAGGTTAA
CDS sequence (LotjaGi2g1v0065900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAGCATAGATACGTTGCATGCAAGCTGCATGGTTTAAATGCTCAATGGAGTGAGGAGAAGAAGCAAAGTTACAT ACGACACGCAATTCGTGAATATAACATTCACAAGACCCTAGTCCATCGTCACATTGTTCGGTTATGGGACATCTTTGAGA TCGATCATAATACATTCTGTACTGTTCTAGAGTACTGTAGTGGGAAGGATCTTGATGGTGTCCTTAAAGCAACTCCTATA TTGCCTGAGAGGGAGGCTAGGGTCATTCTAGTTCAGATTTTTCAAGGCCTTATTTACATGAATAAAAGAACACAGAAGAT TATTCATTATGATTTAAAACCAGGAAATGTTCTGTTTGATGAGCTCGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTA AGATAGTGGAGGATGATGTGGGATCCCAGGGCATGGAACTTACATCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCT GAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTCTATCAAAT GCTGTTTGGAAAACGTCCTTTCGGACATGACCAAACACAGGAAAGAATACTTCGTGAAGACACAATCATTAAGGCGCGCA AGGTTGAGTTTCCTCCGCGACCTGCTGTTTCTAATGAGGCAAAGGTAGGTTAA
Protein sequence (LotjaGi2g1v0065900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDHNTFCTVLEYCSGKDLDGVLKATPI LPEREARVILVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPP ECFELSKTPLISSKVDVWSAGILFYQMLFGKRPFGHDQTQERILREDTIIKARKVEFPPRPAVSNEAKVG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 229 | 229 | 2.1E-53 | – | |
| ProSiteProfiles | 1 | 230 | 230 | 33.079 | ||
| PANTHER | 2 | 228 | 227 | 3.1E-148 | – | |
| PANTHER | 2 | 228 | 227 | 3.1E-148 | – | |
| SMART | 3 | 218 | 216 | 4.8E-28 | ||
| SUPERFAMILY | 4 | 207 | 204 | 1.75E-53 | ||
| Pfam | 7 | 228 | 222 | 2.8E-46 | ||
| PIRSF | 14 | 228 | 215 | 4.1E-18 | – | |
| ProSitePatterns | 107 | 119 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0065900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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