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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0072800 |
| Transcript ID | LotjaGi2g1v0072800.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sentrin-specific protease; TAIR: AT3G48480.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5; TrEMBL-Plants: tr|G7IJ15|G7IJ15_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi2g1v0072800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:18496498..18503101) extracted from Lotus japonicus Gifu genome v1.2.
AGACTATCACGTTAGGCTATGGTTTTTTTTGCTCTGACTCAAGAGGTTGACCCCAGAACCCACCGATTGAAGAAAACACC TTCCGCGGCAAAACCTGGTTCCTCGCCGGCACGATCTATGAAGCTCTTGCCCCGGGACCCTCTCTTGCTCCGGCGCCAGC TCCGGGACCTGGTGGCCCCCACCACCACTTCAACGGCGAGGCGCAGGTGAAGGATTTCATCTAAACCCTGCTTCACTACG GCGGGTACAACGAGATGGCTGACATTCTGGTGAACCTGATGTCGTTGGCTACTGAAATGGGTCGTTTGGTGTCGGAGGGT TATGTTCTCACTGTATTAGCTCCGAACGATGAGGCCATGGCAAAGCTGACGACGGAGCAGCTGAGCGAACCGGGTGCGCC GGAGCAGATGTCAGGGGATTGACGGGGGTTTTGTTTCCGGTGGAGGAGGTTAAACCCGATTCGCAAACGGGTCAACCCGC TAAAGTGGTGGTTAAGCATAGAAGAGGTATGTTGTTTTTTCTCTACCTGTGGTTTTTAGTGGACTTTGTTTCGATCTCTT GGCTTGTTTAACCTTGTTTAATGGACTACATTTATAGTTTTGTTTAATTAGATTTTAAATTGGTGTTAATTTCGGGAAGT TTGTTGAAGTTATGGTTTGAGATTATAACAAAGTTATCTCATAAAACAAATTTATCTCATAAAACAAATTTTCCCCACTC TTCCACTTTCTTAGAAACCGTATACGCACACTCCTGTACTCTCTCATCTCACCCGCTGAAAAGCTCCAATTTTCTTTTGC GCGGGATCAGTTTTTGCGAGAAGCTCTCTGCGAGAAGGCTCGAGGAGAGGGATTTAGGAAGCTCTAAGCATTACAAGCAC CTCTGGCTGTCTTTTGCGTGTGGGAAGTCAAGCTGTGGCAAGGGAACCGGATCGTGTAGAGTCCTCTCTTTATCTCTAGT CACCAAAGGTAATCACTTTCTCTCCCAAACCCATTGCATTGTCTTGATTTTATACTATGTCACTCAAGTGTGTCTCTTGC TTTTGACATACAAAAGAATTAAGTTTGGGGGCTTGTCTTTCTGAACTTCTGTTGCTCTAAGGAAGTAACATATCTGGTTG TATTTTGCTGTGGTTGGATATTCTGGGGGTCTGAGTTGGTGGTTGAATTTAACCTTAGTAGGAGCTGAGGTTTGGTGTTG TGCTAATGTGTGCGGGACACCTCTGATTGAACCCAATTGCTTTTTTTTTTGGGTAAGCAAAAATATATTGAAAGAGAGTA CTAGGGGTACTCTAACCCAAGTAAAGAAGGATAAATACAAGAGGTACAGGAGAAAACCAAAGCAAAGAAAACAAAAAAAC TGGCACCGATTCCAGCCCACTAACAGATACAAAAAAATAGATTTTCAAAGCATAGGCATTGCTGCTATCTACTATCTGAA GATGCCTATTCAAATATCACAAAATTCCTCAACAATTCAGATCAAAATCAGTAAGCAGTAATTATGTTTTGAAGTTGCAT CTGTTATGGTGAGGTTGTCCTTCACCCTTTCATTGGCTGGGTTCTTTGTGCCTTTAGATTGTAGGGCTTGGGTGACTATC CATTGTAATTTAAGGCTTAATGTTTTTTATTAAAGTTGGAGGATTCAGCGCAAGTGTGGGAATGGTTTTTCTAATGTCTC CTTAGTTTTTCTTTTTCTATTTGGCTTATCTTGCAACTTATTCGTGGGAACCATTTGCTGATTAATTATGTTCAATGTAG ATTTAATTTGATAGATTGAGAAATATGGATCGAGAATGGATGTCTGCCAATCGTTTGTCTCAGGAATATGAGGATGGAGT GAAAATGTTTATTAGGTTTGCAGTTGAGCATGAAGAAGACCCTACCAGAATTGTATGCCCTTGCTTAAAATGTTGTTTTG CAAAGCGAATTAGTGCGGCTGATTTGGAAGATCATTTGATAATGTATGGAATTGATCAAAGTTATAAATGTTGGACAAGG CACGGTGAGACAATTGTGTAAGTAGATAGCAGTTTTGACCACTGATACAACTCATTTCTTGGATGAGAATTTTTCCTGTT TTTGTTGTTATCCACCGTTGTTGAACATGTTGTGCTTCACATGTAGTTTTTTTATTTTATTTTTACTGATAGAGAGAAGC TCTAATTTTGCTTGCCATGTTCGGTATTTTCAATTTTTTTTTACTATGGGGTATCTTGTTTTGCATCGCTTTTTAGTTTT GTTTTTTTATCCTAATCTTTTCCCAGGTTGGTTGCTGCTGTATAGATTGAACCCTCTCTGGTCTTTATCCTAATCTTTTC CCAGGCTGTTTGCTGTTGTATCTTGGCTTACTAGTTTGCTGGTTTTTTACTGGTTTTTACTGGTATATTTGAGCAATTCT TGACTGTGAGTTTGCTGGTTTTTTTACTGGTATATATGAGCTGTTATGGACTATGAGTTTGCTGGTTTTTACTGGTATAT TTGAGCAATTCTTGACTGTGAGTCTGCTAGTTTTTTTACTGGTATATATAAGCTGTTATGGACTGAGTCTGCTGGTTTTT TTACTGGTTTTTACTGGCATATATGTGCTGTTACTCACTGTGGCTAGTCTAATTCGGAGGCTGGCTTTAAGGGCAGATTG CTTTTGTGAGGGTCACGGTGATGGTTAGCTAGTTTTTGAGGATGGTATCTCTCAATTATGTTCTCTGATGCTTCAGTTTG CTGCCCCTGTTCAGATGAAGATTGATCTTGCTGCTGCTTTTTATTTCGTCATTTTCCCTCTTTTTTACTGTTTTCTCTTT ACTCTTCTAGCTATTGTCTAGTTTCTTTGCTGTTGTTATTTCTTTTGCTATTGTTGCTTTGCTCTTTACTCTTCTAGCTA TAGTATGTTTTTACTTGGGTTCACCTTGCATGCACTGATAAGATTAGAAAAACTAATCAGTTGCTTGAGAAAGATAGTGT GTTCATTACTGTAAGTTCTTAAGATACTTGTTATCAAAAAAAATATTTGTTTACTATATTCTCCATACCTTTATATTTTC GCATTTATATGTGCCAGGAGAACTTGTCACAATCTGTACCAAAGGATGAGTTACAAGACGATCCCCGTCAGGACATACTT GCTAGAGCATTAAATGTCCCTGAGTACCCTGGTCGTGTCAGGGCTGCAGGGCTGCAGGGCTGCAGGGCTGCAGGGCTTGG AGTTTGCCAAAAACGATACTTCTTGGGTAAAAAGCGCAGAAGAAAGAATCCTACCGTTGAGGAAATGGATGACTTAAAAG CTCAGCTACAACAAATGAAAACTATGATGTGTGAAATGAGCAAAAAATTGAATGATAAAGAAGCAATGGACAAACAACAA TCTGATTTGGTTGTTGCTAGTGTTAAAGATAGTGCTTCTTACCACATTCCTAAGGTATTAATTTTTCTAATAAGTATTGC AGTCTTATTGAATTGCGCTCTAAAATTCTCTTTATTTATGTTTTGACTTAGGGAACATCTCCATGCGATTTAAAGTTGTC AACCCCAACACATCGCGTGGTTGGGAAGGGGCAAGTATTTAATGTTGAAGGAGCCACGTTACATAATAAGTCGTTGCCGC TGAACCATATTAAGGTTCTTATGGAGATTGCTGTTGAGCCAAATGCAAATTTGCCAGTACCCGATGATTATGAAGGCAAC ACAAAAGTTGGTCAGGCAATTGGAACATTTTTAGCTTGGCCAATCAACCTCATTGGTCTCTGCAATACGGTATATAAATT CTTTATAATCTACTTGATAAACATATTTATTATTTTAAGCATGACTAATTTGTTCAACTTAAAATTGCAGAAACCTACAC ATGATAAAGGAAAGGCTGACCTGCCGACCAATACAAGTGAATCAATTTCAACACCTAAAAAGAAGAAAAAGATTGACTCC AAGAAACCTTCCCCTGCAAAAAATTCATTGTTTGTGATGCCTAGAAAGAAACCAGGAGTGTCGAAAATTCAAAAGCCCTT TCCTGCACAAAAGCCGACAATTGTGGCATCTAACAAGAAACAAGGACAGGTGAATAATCAGAGGCCCCCTGCGCAGAAGC CCTTCCACGGAGTTGGTGAGACCACCCCACATTGTACTTACCTTTCTATACATGTTGGTAAGATGGACCCTGACCACCCA CGACACATAGTCATGGAAGAAGAAATAATTGGTCAACCATATGATGAATATCTTGGTGTAGATCAAATGAATGAAGTTCT TTATCATAGGTGGCTGAGTGCCTCTGTTATATGCACATATGTCAGGTAATTCATGGTTAAGTTCCTTTCAACCACTTTGT GTTCAGTACTTTTATTATTTGTTGATGGTAATACATTCACATTTTGCTTTTGGGTTTTCATGTAAGGTACTTGTATTATG AGTTGATACTTAAAACTCAAAAGACCAGTCGATTCTCATTCATGAGCCCACATCTTACAACACGTTCTCCAAGATGGACA ATCACAAAATGTTGCTAAGGTGCTCAGTAACTCTCAAGAGGAAGGAAAAATGTTTCTAGAACCTTGTAATGTAGAGTGAG TAACTTTTTTTAAAATTGTTAAGTATTTTCTCATATGTTTATAATTAGATCACCAAGAGAGCACTAGGTGTGCTAAAAAA CCAAATACAAAAGGATCCAGAGTGCCTAGATACAGAGGAAGAAAACCTTTTATATGTCTCAGAAATTATAATTATTACTT TATGTGTCAACATTTCCAGTAAAGTTTAACCTTTCTCTAGTAAAGAAATTTAAATTTTTAAATCTACTTATTTGTCATAT GCTGTAGAGTCTCTTTTTAGTTTATTATATGTATCATCTCCTTTTCTTTTGTTTTTCTTATTAAACTTATCACTTAGTAC TGATGAATCTATGGTTGGTTCTCGAAGAAAACTATTATGAAATGATGATGAGTGTAGATTTTGGCAAGAATGAGGTAGAG GTAATACTGGTAGTGTGTTCTGTTGAATTTTTATCTATAGCATTCACACTAATTACTTCCAATTACACAAAGGTGACCAA TACCAAATGTTAATATTTCTTACTTTTTCATATACCTCTATTTGAATGATAAACGATGTAGGCAAACAGGTCACTTTTAA TGACCCATCAAATGTACTTTGAACTTTTGTGTATACTGACTTAGTGAGCACTGAGCAATGCATTTTTATTTAGCACAAGT GTTATATACATTTCTATTGTAAGCATTATTTTTTACGTCCCGTGGACATCCTTAATTAGTTATTACTAAAAAAATTTGTA GGAATCACTGGGTGTTGGTTGTCATCAACCCCAATTCCAAACTAGACACTATCTATTATTTGGATTCTATGCATGGTACT CCCAGAGATTGGCCGGGCATGAAGGAAATATTTAACATGTATGCATTTGCTATTCTTCTCTTTTTATGAATGTGATGATA GAAAAAAAAATTCTGATGCAAGATTTATTTCACTTTGTTAGTGCTTTGTACATGTACCGCGCAAGTAGGAGAGTTAGTTT GCCAAAAGCTAAGGCAAACAAAATAAATTGGGTTGTTGTAGAGGTAATATATACAAATTATCTATTATTTAAGAAATTAA ATTGAATGATTATTTTTAATATGTTTCTTTAATTTTATAGTGCCCACAGCAAACTAATGGCATAGATTGTGGGTTCTATG TCATGAGGTTTATGAAGAAACTTATTTTACAAGATCAAGATTCAATCCCTGTAGAGGTATGTGATGTCTAATATAGTCTA TATAACAAATGTCTTATTTTTAATTCTATAACTACAATGATTTTACTTATGTGATGTTTATGTTTTGCAGTACTTTCCTA AATATAGATGTGCTACATATTCTAATAAGCAACTATGTGAAGTTAAGGAAGATTGGGCTGAGTTCGTGCTTCAAAATATT ATATTTCATTAGATGGTAATAGCATAAACAACTATATGCATTAATTTGATATTCTGTAGTAGACTAGTAGTATAGTTTAA TTTTATTGTTTATTGTATTTTGAGTATTATACTTCAATTATTTTAAGTTCTATGGTGCAAGGCATGTTATATGTTATGGT GAACACCTAGGATTATAATTTGTTTTGTCCATAGTAATATGCTGCTTGCACTTCAAGGGTGGTGCTTTGGATGGGTTGCT TCTTAGTTGGGTTGGTTGTGCTATTTTTACTGGGTGTTTACTGCTGTTTTTTTTTTGCTGGTTTTTATGAGTGAGGGGTG GCAGTGTGGCTTCGAGGTTGAGTATGGCTCTAGGTGTGTACTGCTTCGTTCATTATCTTCATGTCTATAGTAGGTTTTTC TCTACTTCAGATTGAAGATTTACATGGTAGTGTGGCTTGTGGTTGATGGCAATGGTGATATAGAAGTTATGCTAACAAGC ATCCATGCGTTGGCTTTTGTTTTCTCTAGGTTTAGTTTGTGTTTTTGTATATATTTGGGGTTGTCTAATTTTTTTTTGTT GACTTGCTTGGGAAGGAAAAAAGTATTCTTTTTCCTGCACTAGGGTTTTTCCCACTGGGTTTTTCCCAGGAATGTTTTAA TGAGGCTCTGTAGACATTTCATGTGGTGTTGGATTTGTTGTTCC
CDS sequence (LotjaGi2g1v0072800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCTAGAACCTTGTAATGTAGAGAATCACTGGGTGTTGGTTGTCATCAACCCCAATTCCAAACTAGACACTATCTA TTATTTGGATTCTATGCATGGTACTCCCAGAGATTGGCCGGGCATGAAGGAAATATTTAACATTGCTTTGTACATGTACC GCGCAAGTAGGAGAGTTAGTTTGCCAAAAGCTAAGGCAAACAAAATAAATTGGGTTGTTGTAGAGTGCCCACAGCAAACT AATGGCATAGATTGTGGGTTCTATGTCATGAGGTTTATGAAGAAACTTATTTTACAAGATCAAGATTCAATCCCTGTAGA GTACTTTCCTAAATATAGATGTGCTACATATTCTAATAAGCAACTATGTGAAGTTAAGGAAGATTGGGCTGAGTTCGTGC TTCAAAATATTATATTTCATTAG
Protein sequence (LotjaGi2g1v0072800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLEPCNVENHWVLVVINPNSKLDTIYYLDSMHGTPRDWPGMKEIFNIALYMYRASRRVSLPKAKANKINWVVVECPQQT NGIDCGFYVMRFMKKLILQDQDSIPVEYFPKYRCATYSNKQLCEVKEDWAEFVLQNIIFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 122 | 122 | 4.8E-19 | – | |
| ProSiteProfiles | 1 | 96 | 96 | 12.514 | ||
| PANTHER | 5 | 108 | 104 | 3.8E-18 | – | |
| PANTHER | 5 | 108 | 104 | 3.8E-18 | – | |
| Pfam | 5 | 104 | 100 | 1.3E-16 | ||
| SUPERFAMILY | 5 | 114 | 110 | 5.3E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi2g1v0072800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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