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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0073900 |
| Transcript ID | LotjaGi2g1v0073900.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc transporter 5; TAIR: AT5G38380.1 zinc transporter; Swiss-Prot: sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5; TrEMBL-Plants: tr|I1LX25|I1LX25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0073900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19246839..19251663) extracted from Lotus japonicus Gifu genome v1.2.
TTGAAGTATTGACTTGGTTTGCCTAATTGTACGGGTTAAAATTTACCCTTTGTAGACACACACCCTTCCAGATAATTCAT ACTGCTGCAAATTTCATGAGGATATGGTCAATATACTCCATGTACCGCTACTTATACCAGACTGGAGCTTCAGTTGTTCT ATTTCTGTTTGCCTGCCTTGCCCCAACAGCGATCATATTTTTAGTTTTGCAAAAGCCTTGGAAGGGAAGGCCACTTTCTA ATACGCAGGTAAGTTTAATTACTAATTTCTGCTGAGAGTATTCAGGAATGAGCTTAAAATATTAAATTCAACAAAAATTT TATCATGATGAGCACATTCCTTAACGAATACTATTTGTTTTTTCAGATTGTGCCATCTATAATAAATGGCTTTATAACAG CACTGTATCTGGTCTTGTGGGGAAAGGGACTGAAATCATGTGGACCAGTTAGGTTGGTTTTTGTATGATTGAAGAAAATT TCAGTTCATAACTTTATTGTATCAAGTGCTTAGTTTTAATTATATAAATGCCTTTGAGTTATGTGGCATCTTCGCTGATG CTCAGTTATATAAGTGCTTAGTTCAATACTTCAATTGAATCATTGATGTCATCCACCACTGTTATATAGCTATTTCTTGT TTACCTTAGCATTGATGTGCAGACTGTTGACTGGTGCTTGATTTGATGAGCTATTTTTTTTTTTTCTCAAACCAATTGGT ATTAAAACTTAATGCAGTTACCCTTTTTTATTAAATTTAGAGCACTATTGGCTGAGTATTCCGGTGCTGTCCTTGGAGTA CTTTCTGCAGTGTTGTATGGTAGGAGAAGCCATCTGTTGAAAAAGGTAACACTTTCAGATACTCCCATTCATTGGTATAC TGTGTATGACTGATACCACAAAACCATATACTCCAATTGAATTAAATACCTATCCTATAAGAGTTTATTTTTTCCTGGGT GCAATTTTCTCCTTTCTTATTAATCTGCATTAATAAATATCTTCTGAACTAGTAATCGTTTCCTGAATTGTTTTACTACG CCTCATGTAGATTTTTTTTTTCATTGCCCCGTCTTTAAGCTCTACCAGTAACATTGTTTCTTGTTGTATCTAGTCTTAGC TGTTTTAGCAGATCTCTTACGATCCCCCAGTTGTATTTTTATCCTTATCTATGATATAAAACATTATTTCATCATTAAAG ATTTATATGTTTAGTTTGTGTTATTATACATTAAGTGATGCTGTATGCCCTGCTTGTTGTGATTGGCGTGTTTGAATGAA GTCTAGAATATTCTGTAATGTGATGGATACTTTCTTATTTTGAACCAGATAGGTGGCCTAATTGCCATGCTGGCATCTTT ATACTTGCTATCTGAAGGATGGGCTATGGCAACATATTCTCCATTCTATATCCTTATTCAGACTGGGTTATTTTCTTCCT TAAATTGACAAAGTTTACTGCTAAAATATGTTTTGCATGCTAAAGTACCTTTTGCTCCTTATATTCGGTTTCTTGTTTTC CAAGGCCTTTGTCCTTTTCCATATATTCCATAAGATCTGTGAACTTAACTGGAATTTACCTTGGGAAGATAGAGATGATT CAGAGGTTCAGACTGAACAAATTTTGGGCTTGAAGCAAATGTTCGTTCCTATTTTTGCTGGTATCCTATCAGCACTCAGG AGAGTGATTGCGAGGCGTGTTTCAATCAAGGTGGTAACACTCATGTAATATGCAGTTAGTAATTCCTCTTTGGTACGAGG TGCGTTATGTGTACCATAATAACTAACCATGGACATCTTTTCTTTTCAGAATCAACTTAAAAAGAGACTCCATGCTTTAA CTATTGCCTCTGCGACATGTTTTATGTTTCCTATTGCCATGTGGGACATAATCATAGTGAGTTCTATTACGAAGAACATT TCATTTTAAGGTCTATATTAGGATAGATTTATGTCGATGTAAAATTCTTCTTGTCTTGTTTTGTGGTTTTGGCTTGATTT ATGTTTGACAATTTCTCTAACCATGTTCCACCTCCTTTGGGTCCTTCAGGGATCACCTTCTGACAGCAACGGAAAACTCC CATTCTCTGCCTGGGCCTTCTTTAGCACTATTCTCTTTGGAAATATTTTGATATTCTATGTTGACAGTATTGCAGAAGAG AGGTATGCCATGATAGTATTGCCATAAGTGATGGTTGAGTGAGAAAAAGGAAGGTTCTTTTGCATTTTGGCTGGCTTCTT ATGCTCTATAGATTATCAGATGAGGTTCTATATTTTAACTATTAACAATTTCATCCCAGTAATAACATTCTTATTTTGAA ATTGGCTTCAACTATCGGTTTTATGAAATACTTATCTCAAAATTGGTGACTTGAAGTTTGTTATAATAGGTCAAATTTAA ATTCAAGTTCATCTAGTAAGATCTAAATTGGATTTGAAAGTTCTGTATGTTGCAAGATAAGATAATGCATGAGATTTGAT GATTTGGATCACTTTGGAGATTGCACATAATTTGGATCACTTTGTAGATTACTGAAAATTCATACTTCATAATGTAGATT GCACATGGTTTTCTCCTCACCAAGGCATTTGATGGTGGCTAGTGCATGCATCATCATCATGGAGATTGTGTACAAGATGG ATTTTTCTCTTACAGGCTTTGTGATTTGCTGCTTAATATTAGGTTTTGGTACGTCTAGTGCTTAGCTTTGAATATTAAAT TTTCTCTTCAAATTTTATTTTCAATGGATTTTTGGTAGAGCTTAAGTAGCCATGAATTCATTATCATGCCTTTTCTATTT TATTTTTTTTCATTTGGATTGCAATTCAATTAGTGGGGTAAATGTTAAAAGTAGCTACTTAAGTATGATTGGTAGTTGTC AGACTCATTAAATCCTAAGATTTCATTTATAGTTTTTGTTTCTAGTTCTCACTTTTGGTGGTAAAACTCATTGATGATGC GAAATGAAGCTAACTCATATTGACATCTACAGCCATCTGTTTTTTAGTTTCCTTTGATTTTCTGCCGATGATTGTCTTAA GGGTGTTTCAATCTTTGCCTTGTAGATAGGTCTAGCAGATAGCTGGCAGCTGCATTCCTAGTTTTTCTCATTTGATTTTT TTTAAGGATACCATATCATGTCCTTAACTGTACTTGTGCTTTGACTGCTTTCTTTCTTTCCGTTCTCTTTTATAACATAA TTTTCGTTAGAAAATATATCAGAGAAGAAAGTTTTATTTCTCTGATTTTGATTGAAAAATACAATCACTCATTTAAAGGC CGAATAGGCTCTATATAAGGAAACCAATTGATAGAAACTCAATCAGATTGAGGTAAGAAAAGGGAAGAACTGAACAGGTA GTAGATACAAAGAACAGAAAGAAACTGAATATGCTTCTCTTATTAAAAGAATGAAATGTAGAATACAACTCTAGCCTTCG AGAGTCTAAAACTCTCCCAAACTGATCCAATTTCCAGAATGGATCTTCTAACAGTTCTTACCATTCTTAAAGGGAGAGCT AACTCTACAGTTACAACCGATTTTCCCCTAACTAACAACCTCTTATTACTACAGATTCTCTCCTAAGTAACTGACTGTTA TTACAATGAGAAGTCTCTAACTAACAAACAGGTCTAGTACCTCAGGCCCACATAAAGTCGCCAAACATCTTTCACTTACT ATTCCTCCTATGATAAACCTTTGCAATCTAAGGTGTATCTTCAATTCTCTATCACCAATCTGCTCTAAAAAAGGACAGAA TAATCAGAAATCAGATTTTATTATAATCTGTTACTGACTTAGATTTTATTACACAAGTCAAAAGTAAACATTAGGAAAGA ATCACACAAAATCAAACTTAATGACACCCAAGATGCTTTTCTAACAAGTTTGCTCATTCAGAAAGAAAAGGATGAAGTGA TATAAATACTTGAAAATTTAACTTAATACTTTTTGTGAACAGTGATACTTAGCTTCTCAGATTCTATATACATAGGTTTT ATCCCCTGGAATTTATTTCCTGGAAAAAAGGTTAAATCTATTTTAAACTTAGTTGATCTTTAACACCATGCATGTGGAAT TCTTGAGTTTCACTGGTCATTTGTCGCTTTTTCTTATTAGGTCTTTCATAAGAATGAGGTTCAGTATTGTTACTGGTGTC TTGACTCTTGGAAATATTGAATGTCTATCCACTTTATCTCTAGCCAATGTGTAGGACTTCTAATACACCCCGTCATGCCT AGAGTTGGACATCTGGAGCGTGGAATTTGCAGGACTGGACATCTGTTTTGTCCACTCTTCTGATGTTTGATTATTTTTCT AGGACTACTAGAATAAGTGCATGTAATTTAACTTATTCTGAGGAAGGAATCACTATTCCAACTAAGCTCTTGAAAACAAT TTGTAACCATATATGCACTGAACTCAATTTTCCAATATTAGTTATCCATTATATTGGATTCCCTCTGCCTTACTGTTTTA AAGAGTTTTCATTGCGGAAGACAGTTTATTGTTATTAATACAGCAGAAATATGCAGTACAATGATGCATACATATTCTCA CAATCGGTTTTGTGAAATCTGAAAAGATTTTTAAAACTGTCGACTGCATATTGGCATACTTTGGTGTGCATTGTTCTTGC TTTCCTTTCTTGTTTCTATTTTTCTCCTTTTAGTAGTTTATCCTGAATGCTCATTGCAATGGAATTTGGTAGGGATATAT CAAGCAACTTCACTGGAGCGCAATAGAAAAGATTCTACCCGAAATTCTGATTTATCAAATGGAGAATTTGATGATCAAAT CCAGATGTCGTCGCTACCTACTTAA
CDS sequence (LotjaGi2g1v0073900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATATGGTCAATATACTCCATGTACCGCTACTTATACCAGACTGGAGCTTCAGTTGTTCTATTTCTGTTTGCCTG CCTTGCCCCAACAGCGATCATATTTTTAGTTTTGCAAAAGCCTTGGAAGGGAAGGCCACTTTCTAATACGCAGATTGTGC CATCTATAATAAATGGCTTTATAACAGCACTGTATCTGGTCTTGTGGGGAAAGGGACTGAAATCATGTGGACCAGTTAGA GCACTATTGGCTGAGTATTCCGGTGCTGTCCTTGGAGTACTTTCTGCAGTGTTGTATGGTAGGAGAAGCCATCTGTTGAA AAAGATCTGTGAACTTAACTGGAATTTACCTTGGGAAGATAGAGATGATTCAGAGGTTCAGACTGAACAAATTTTGGGCT TGAAGCAAATGTTCGTTCCTATTTTTGCTGGTATCCTATCAGCACTCAGGAGAGTGATTGCGAGGCGTGTTTCAATCAAG AATCAACTTAAAAAGAGACTCCATGCTTTAACTATTGCCTCTGCGACATGTTTTATGTTTCCTATTGCCATGTGGGACAT AATCATAGTGAGTTCTGGATCACCTTCTGACAGCAACGGAAAACTCCCATTCTCTGCCTGGGCCTTCTTTAGCACTATTC TCTTTGGAAATATTTTGATATTCTATGTTGACAGTATTGCAGAAGAGAGATTGCACATGGTTTTCTCCTCACCAAGGCAT TTGATGGTGGCTAGTGCATGCATCATCATCATGGAGATTGTGTACAAGATGGATTTTTCTCTTACAGGCTTTGTGATTTG CTGCTTAATATTAGGTTTTGGGATATATCAAGCAACTTCACTGGAGCGCAATAGAAAAGATTCTACCCGAAATTCTGATT TATCAAATGGAGAATTTGATGATCAAATCCAGATGTCGTCGCTACCTACTTAA
Protein sequence (LotjaGi2g1v0073900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIWSIYSMYRYLYQTGASVVLFLFACLAPTAIIFLVLQKPWKGRPLSNTQIVPSIINGFITALYLVLWGKGLKSCGPVR ALLAEYSGAVLGVLSAVLYGRRSHLLKKICELNWNLPWEDRDDSEVQTEQILGLKQMFVPIFAGILSALRRVIARRVSIK NQLKKRLHALTIASATCFMFPIAMWDIIIVSSGSPSDSNGKLPFSAWAFFSTILFGNILIFYVDSIAEERLHMVFSSPRH LMVASACIIIMEIVYKMDFSLTGFVICCLILGFGIYQATSLERNRKDSTRNSDLSNGEFDDQIQMSSLPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 112 | 112 | 4.5E-157 | – | |
| ProSiteProfiles | 1 | 27 | 27 | 5.0 | – | |
| Phobius | 12 | 38 | 27 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| SUPERFAMILY | 31 | 101 | 71 | 3.27E-5 | – | |
| Phobius | 39 | 49 | 11 | - | – | |
| TMHMM | 50 | 69 | 20 | - | – | |
| Phobius | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| Phobius | 81 | 99 | 19 | - | – | |
| TMHMM | 82 | 99 | 18 | - | – | |
| Phobius | 100 | 130 | 31 | - | – | |
| PANTHER | 122 | 310 | 189 | 4.5E-157 | – | |
| Phobius | 131 | 149 | 19 | - | – | |
| TMHMM | 137 | 154 | 18 | - | – | |
| Phobius | 150 | 169 | 20 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 170 | 192 | 23 | - | – | |
| Phobius | 193 | 203 | 11 | - | – | |
| Phobius | 204 | 223 | 20 | - | – | |
| TMHMM | 204 | 223 | 20 | - | – | |
| Phobius | 224 | 234 | 11 | - | – | |
| Phobius | 235 | 255 | 21 | - | – | |
| TMHMM | 236 | 255 | 20 | - | – | |
| Phobius | 256 | 260 | 5 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 261 | 281 | 21 | - | – | |
| Phobius | 282 | 310 | 29 | - | – | |
| MobiDBLite | 287 | 310 | 24 | - | – | |
| MobiDBLite | 295 | 310 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0073900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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