Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0073900 |
| Transcript ID | LotjaGi2g1v0073900.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc transporter 5; TAIR: AT5G38380.1 zinc transporter; Swiss-Prot: sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5; TrEMBL-Plants: tr|I1LX25|I1LX25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0073900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19246839..19251663) extracted from Lotus japonicus Gifu genome v1.2.
TTGAAGTATTGACTTGGTTTGCCTAATTGTACGGGTTAAAATTTACCCTTTGTAGACACACACCCTTCCAGATAATTCAT ACTGCTGCAAATTTCATGAGGATATGGTCAATATACTCCATGTACCGCTACTTATACCAGACTGGAGCTTCAGTTGTTCT ATTTCTGTTTGCCTGCCTTGCCCCAACAGCGATCATATTTTTAGTTTTGCAAAAGCCTTGGAAGGGAAGGCCACTTTCTA ATACGCAGGTAAGTTTAATTACTAATTTCTGCTGAGAGTATTCAGGAATGAGCTTAAAATATTAAATTCAACAAAAATTT TATCATGATGAGCACATTCCTTAACGAATACTATTTGTTTTTTCAGATTGTGCCATCTATAATAAATGGCTTTATAACAG CACTGTATCTGGTCTTGTGGGGAAAGGGACTGAAATCATGTGGACCAGTTAGGTTGGTTTTTGTATGATTGAAGAAAATT TCAGTTCATAACTTTATTGTATCAAGTGCTTAGTTTTAATTATATAAATGCCTTTGAGTTATGTGGCATCTTCGCTGATG CTCAGTTATATAAGTGCTTAGTTCAATACTTCAATTGAATCATTGATGTCATCCACCACTGTTATATAGCTATTTCTTGT TTACCTTAGCATTGATGTGCAGACTGTTGACTGGTGCTTGATTTGATGAGCTATTTTTTTTTTTTCTCAAACCAATTGGT ATTAAAACTTAATGCAGTTACCCTTTTTTATTAAATTTAGAGCACTATTGGCTGAGTATTCCGGTGCTGTCCTTGGAGTA CTTTCTGCAGTGTTGTATGGTAGGAGAAGCCATCTGTTGAAAAAGGTAACACTTTCAGATACTCCCATTCATTGGTATAC TGTGTATGACTGATACCACAAAACCATATACTCCAATTGAATTAAATACCTATCCTATAAGAGTTTATTTTTTCCTGGGT GCAATTTTCTCCTTTCTTATTAATCTGCATTAATAAATATCTTCTGAACTAGTAATCGTTTCCTGAATTGTTTTACTACG CCTCATGTAGATTTTTTTTTTCATTGCCCCGTCTTTAAGCTCTACCAGTAACATTGTTTCTTGTTGTATCTAGTCTTAGC TGTTTTAGCAGATCTCTTACGATCCCCCAGTTGTATTTTTATCCTTATCTATGATATAAAACATTATTTCATCATTAAAG ATTTATATGTTTAGTTTGTGTTATTATACATTAAGTGATGCTGTATGCCCTGCTTGTTGTGATTGGCGTGTTTGAATGAA GTCTAGAATATTCTGTAATGTGATGGATACTTTCTTATTTTGAACCAGATAGGTGGCCTAATTGCCATGCTGGCATCTTT ATACTTGCTATCTGAAGGATGGGCTATGGCAACATATTCTCCATTCTATATCCTTATTCAGACTGGGTTATTTTCTTCCT TAAATTGACAAAGTTTACTGCTAAAATATGTTTTGCATGCTAAAGTACCTTTTGCTCCTTATATTCGGTTTCTTGTTTTC CAAGGCCTTTGTCCTTTTCCATATATTCCATAAGATCTGTGAACTTAACTGGAATTTACCTTGGGAAGATAGAGATGATT CAGAGGTTCAGACTGAACAAATTTTGGGCTTGAAGCAAATGTTCGTTCCTATTTTTGCTGGTATCCTATCAGCACTCAGG AGAGTGATTGCGAGGCGTGTTTCAATCAAGGTGGTAACACTCATGTAATATGCAGTTAGTAATTCCTCTTTGGTACGAGG TGCGTTATGTGTACCATAATAACTAACCATGGACATCTTTTCTTTTCAGAATCAACTTAAAAAGAGACTCCATGCTTTAA CTATTGCCTCTGCGACATGTTTTATGTTTCCTATTGCCATGTGGGACATAATCATAGTGAGTTCTATTACGAAGAACATT TCATTTTAAGGTCTATATTAGGATAGATTTATGTCGATGTAAAATTCTTCTTGTCTTGTTTTGTGGTTTTGGCTTGATTT ATGTTTGACAATTTCTCTAACCATGTTCCACCTCCTTTGGGTCCTTCAGGGATCACCTTCTGACAGCAACGGAAAACTCC CATTCTCTGCCTGGGCCTTCTTTAGCACTATTCTCTTTGGAAATATTTTGATATTCTATGTTGACAGTATTGCAGAAGAG AGGTATGCCATGATAGTATTGCCATAAGTGATGGTTGAGTGAGAAAAAGGAAGGTTCTTTTGCATTTTGGCTGGCTTCTT ATGCTCTATAGATTATCAGATGAGGTTCTATATTTTAACTATTAACAATTTCATCCCAGTAATAACATTCTTATTTTGAA ATTGGCTTCAACTATCGGTTTTATGAAATACTTATCTCAAAATTGGTGACTTGAAGTTTGTTATAATAGGTCAAATTTAA ATTCAAGTTCATCTAGTAAGATCTAAATTGGATTTGAAAGTTCTGTATGTTGCAAGATAAGATAATGCATGAGATTTGAT GATTTGGATCACTTTGGAGATTGCACATAATTTGGATCACTTTGTAGATTACTGAAAATTCATACTTCATAATGTAGATT GCACATGGTTTTCTCCTCACCAAGGCATTTGATGGTGGCTAGTGCATGCATCATCATCATGGAGATTGTGTACAAGATGG ATTTTTCTCTTACAGGCTTTGTGATTTGCTGCTTAATATTAGGTTTTGGTACGTCTAGTGCTTAGCTTTGAATATTAAAT TTTCTCTTCAAATTTTATTTTCAATGGATTTTTGGTAGAGCTTAAGTAGCCATGAATTCATTATCATGCCTTTTCTATTT TATTTTTTTTCATTTGGATTGCAATTCAATTAGTGGGGTAAATGTTAAAAGTAGCTACTTAAGTATGATTGGTAGTTGTC AGACTCATTAAATCCTAAGATTTCATTTATAGTTTTTGTTTCTAGTTCTCACTTTTGGTGGTAAAACTCATTGATGATGC GAAATGAAGCTAACTCATATTGACATCTACAGCCATCTGTTTTTTAGTTTCCTTTGATTTTCTGCCGATGATTGTCTTAA GGGTGTTTCAATCTTTGCCTTGTAGATAGGTCTAGCAGATAGCTGGCAGCTGCATTCCTAGTTTTTCTCATTTGATTTTT TTTAAGGATACCATATCATGTCCTTAACTGTACTTGTGCTTTGACTGCTTTCTTTCTTTCCGTTCTCTTTTATAACATAA TTTTCGTTAGAAAATATATCAGAGAAGAAAGTTTTATTTCTCTGATTTTGATTGAAAAATACAATCACTCATTTAAAGGC CGAATAGGCTCTATATAAGGAAACCAATTGATAGAAACTCAATCAGATTGAGGTAAGAAAAGGGAAGAACTGAACAGGTA GTAGATACAAAGAACAGAAAGAAACTGAATATGCTTCTCTTATTAAAAGAATGAAATGTAGAATACAACTCTAGCCTTCG AGAGTCTAAAACTCTCCCAAACTGATCCAATTTCCAGAATGGATCTTCTAACAGTTCTTACCATTCTTAAAGGGAGAGCT AACTCTACAGTTACAACCGATTTTCCCCTAACTAACAACCTCTTATTACTACAGATTCTCTCCTAAGTAACTGACTGTTA TTACAATGAGAAGTCTCTAACTAACAAACAGGTCTAGTACCTCAGGCCCACATAAAGTCGCCAAACATCTTTCACTTACT ATTCCTCCTATGATAAACCTTTGCAATCTAAGGTGTATCTTCAATTCTCTATCACCAATCTGCTCTAAAAAAGGACAGAA TAATCAGAAATCAGATTTTATTATAATCTGTTACTGACTTAGATTTTATTACACAAGTCAAAAGTAAACATTAGGAAAGA ATCACACAAAATCAAACTTAATGACACCCAAGATGCTTTTCTAACAAGTTTGCTCATTCAGAAAGAAAAGGATGAAGTGA TATAAATACTTGAAAATTTAACTTAATACTTTTTGTGAACAGTGATACTTAGCTTCTCAGATTCTATATACATAGGTTTT ATCCCCTGGAATTTATTTCCTGGAAAAAAGGTTAAATCTATTTTAAACTTAGTTGATCTTTAACACCATGCATGTGGAAT TCTTGAGTTTCACTGGTCATTTGTCGCTTTTTCTTATTAGGTCTTTCATAAGAATGAGGTTCAGTATTGTTACTGGTGTC TTGACTCTTGGAAATATTGAATGTCTATCCACTTTATCTCTAGCCAATGTGTAGGACTTCTAATACACCCCGTCATGCCT AGAGTTGGACATCTGGAGCGTGGAATTTGCAGGACTGGACATCTGTTTTGTCCACTCTTCTGATGTTTGATTATTTTTCT AGGACTACTAGAATAAGTGCATGTAATTTAACTTATTCTGAGGAAGGAATCACTATTCCAACTAAGCTCTTGAAAACAAT TTGTAACCATATATGCACTGAACTCAATTTTCCAATATTAGTTATCCATTATATTGGATTCCCTCTGCCTTACTGTTTTA AAGAGTTTTCATTGCGGAAGACAGTTTATTGTTATTAATACAGCAGAAATATGCAGTACAATGATGCATACATATTCTCA CAATCGGTTTTGTGAAATCTGAAAAGATTTTTAAAACTGTCGACTGCATATTGGCATACTTTGGTGTGCATTGTTCTTGC TTTCCTTTCTTGTTTCTATTTTTCTCCTTTTAGTAGTTTATCCTGAATGCTCATTGCAATGGAATTTGGTAGGGATATAT CAAGCAACTTCACTGGAGCGCAATAGAAAAGATTCTACCCGAAATTCTGATTTATCAAATGGAGAATTTGATGATCAAAT CCAGATGTCGTCGCTACCTACTTAA
CDS sequence (LotjaGi2g1v0073900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATATGGTCAATATACTCCATGTACCGCTACTTATACCAGACTGGAGCTTCAGTTGTTCTATTTCTGTTTGCCTG CCTTGCCCCAACAGCGATCATATTTTTAGTTTTGCAAAAGCCTTGGAAGGGAAGGCCACTTTCTAATACGCAGATTGTGC CATCTATAATAAATGGCTTTATAACAGCACTGTATCTGGTCTTGTGGGGAAAGGGACTGAAATCATGTGGACCAGTTAGA GCACTATTGGCTGAGTATTCCGGTGCTGTCCTTGGAGTACTTTCTGCAGTGTTGTATGGTAGGAGAAGCCATCTGTTGAA AAAGATAGGTGGCCTAATTGCCATGCTGGCATCTTTATACTTGCTATCTGAAGGATGGGCTATGGCAACATATTCTCCAT TCTCTTGGGAAGATAGAGATGATTCAGAGGTTCAGACTGAACAAATTTTGGGCTTGAAGCAAATGTTCGTTCCTATTTTT GCTGGTATCCTATCAGCACTCAGGAGAGTGATTGCGAGGCGTGTTTCAATCAAGAATCAACTTAAAAAGAGACTCCATGC TTTAACTATTGCCTCTGCGACATGTTTTATGTTTCCTATTGCCATGTGGGACATAATCATAGTGAGTTCTGGATCACCTT CTGACAGCAACGGAAAACTCCCATTCTCTGCCTGGGCCTTCTTTAGCACTATTCTCTTTGGAAATATTTTGATATTCTAT GTTGACAGTATTGCAGAAGAGAGATTGCACATGGTTTTCTCCTCACCAAGGCATTTGATGGTGGCTAGTGCATGCATCAT CATCATGGAGATTGTGTACAAGATGGATTTTTCTCTTACAGGCTTTGTGATTTGCTGCTTAATATTAGGTTTTGGGATAT ATCAAGCAACTTCACTGGAGCGCAATAGAAAAGATTCTACCCGAAATTCTGATTTATCAAATGGAGAATTTGATGATCAA ATCCAGATGTCGTCGCTACCTACTTAA
Protein sequence (LotjaGi2g1v0073900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIWSIYSMYRYLYQTGASVVLFLFACLAPTAIIFLVLQKPWKGRPLSNTQIVPSIINGFITALYLVLWGKGLKSCGPVR ALLAEYSGAVLGVLSAVLYGRRSHLLKKIGGLIAMLASLYLLSEGWAMATYSPFSWEDRDDSEVQTEQILGLKQMFVPIF AGILSALRRVIARRVSIKNQLKKRLHALTIASATCFMFPIAMWDIIIVSSGSPSDSNGKLPFSAWAFFSTILFGNILIFY VDSIAEERLHMVFSSPRHLMVASACIIIMEIVYKMDFSLTGFVICCLILGFGIYQATSLERNRKDSTRNSDLSNGEFDDQ IQMSSLPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 328 | 328 | 1.2E-178 | – | |
| ProSiteProfiles | 1 | 27 | 27 | 5.0 | – | |
| Phobius | 12 | 38 | 27 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| SUPERFAMILY | 31 | 124 | 94 | 5.89E-7 | – | |
| Phobius | 39 | 49 | 11 | - | – | |
| Phobius | 50 | 69 | 20 | - | – | |
| TMHMM | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| Phobius | 81 | 99 | 19 | - | – | |
| Phobius | 100 | 110 | 11 | - | – | |
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 111 | 129 | 19 | - | – | |
| Phobius | 130 | 148 | 19 | - | – | |
| Phobius | 149 | 167 | 19 | - | – | |
| TMHMM | 155 | 172 | 18 | - | – | |
| Phobius | 168 | 187 | 20 | - | – | |
| TMHMM | 185 | 207 | 23 | - | – | |
| Phobius | 188 | 210 | 23 | - | – | |
| Phobius | 211 | 221 | 11 | - | – | |
| TMHMM | 222 | 241 | 20 | - | – | |
| Phobius | 222 | 241 | 20 | - | – | |
| Phobius | 242 | 252 | 11 | - | – | |
| Phobius | 253 | 273 | 21 | - | – | |
| TMHMM | 254 | 273 | 20 | - | – | |
| Phobius | 274 | 278 | 5 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 279 | 299 | 21 | - | – | |
| Phobius | 300 | 328 | 29 | - | – | |
| MobiDBLite | 305 | 328 | 24 | - | – | |
| MobiDBLite | 313 | 328 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0073900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…