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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0074100 |
| Transcript ID | LotjaGi2g1v0074100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidate cytidylyltransferase; TAIR: AT4G22340.1 cytidinediphosphate diacylglycerol synthase 2; Swiss-Prot: sp|O49639|CDS2_ARATH Phosphatidate cytidylyltransferase 2; TrEMBL-Plants: tr|I1NI71|I1NI71_SOYBN Phosphatidate cytidylyltransferase; Found in the gene: LotjaGi2g1v0074100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:19338281..19343448) extracted from Lotus japonicus Gifu genome v1.2.
AAAGTGTCAAATGTATCGAATTCTGCGAAACAAATAATGGGAAGCATGGTTAACTTTTGATGACTTTCTTTTTCCCCTAT TTAAATTCTAAGTTTCTGTCCTTTAGGTTTCTTCTTTGTTTTGTCTCCATAGATTAATTTTATGTAACAAGTTCAATGAT TTTGGGACTGAATCTCCGCGGTATTTATCTGGAAAAATTTCTGTATACTATTCGTAGGTGATTTATTTTGTGATGTCTTT ATCTCAGGTTATTCCAGAAGTTAGCAAAGCGAATGGAACCAAGTTACTTGTTAATGATAAAAGCAAGTATAAGTCCATGC TAATTAGGGCATATTCATCCATTTGGATGATTGGGGGGTTTGCATTGATCATCTATATGGGTCACCTCTACATTACTGCA ATGGTTGTTGTTATCCAAATCTTCATGGCAAGTGAGCTTTTCAATCTACTCAGAAGAGCTCATGAAGATAGGCAGCTGCC AGGATTTAGGCTATTAAATTGGTATCTATCACAAATTCATTAGGCTCACAGTGCGATTTGTTCTTTTCCTAAATGCCAAG ATTCATTCATTTTTAAAAAAAAAGTAAAATTCATTTAATAACTTGTTACATTTTTCATTGGCATATGCCATTTCAGGCAT TTTTTCTTCACTGCGATGTTATTTGTTTATGGACGGATTCTGAATCAGCGTTTGGCTAACACAGTAACTTCAGACATGGT TTTGTATCGACTAGTGAGCAATCTTATTAAGTATCATATGGTTATCTGCTACTCCCTGTACATTGCAGGTAACTTGTGCA TATCATTTTTGTCTTGTTAATGTTCATTAGCTAGTGCTCGTGCAATGTCTCTATCAGGTGCCTGAGAAATTTCAAGCTTA GTTTCTACAATTGTGGTTTTACTGTTAATTTTTATATAATCTAAGGATACTAATACTTTGGTTATCTTCCCTTTTATTGA TTGGGCTCAGGATTTATGTGGTTCATTCTCACATTGAAGAAGAAGATGTATAAGTACCAATTTGGCCAATATGCTTGGAC ACATATGATTCTAATAGTTGTATTTGGCCAGTCATCCTTCACTGTGGCAAGCATTTTTGAAGGGATTTTCTGGTAATTTA ACTTATAAAAGAATATAATTACTATTTTTTAACTATTCTAAAGAAACCTTCTTGGCTGTTTTTGGAGGATTCTATTTTGC TTGATAGCATACTTCATGGTACTGTTCCTCATACACGTAGACAACTTTTTAAGCCAAGGATCAGATTTTAAGAATATTAT GATGGTTGAGTGTTTGCTCAAGACAAGATAGGGTTAGAAATACAATCATTAGAGACAAAGTTGGGGTAGCTCCCTTGCTT AGAAGATGAGAGAATTTCGTTTTAGATGGTTTGGATGTGTGTGGAGAAGACTAGTAGGAACTACAGTAAAGAATGTGCAA CATATGGAGGATAGTTTAGTAATAATATGAAGAGGAACTGATAAATGTTCAACATATGAAGATAAACTGTATCTCTGAAT TTGATGTATGGTAGATCATTGTGGCGTTGTTTGATTCATGTAGCAATTCTAACCTTGTGGGAAAAGACTTAGGTGTTATT GTTGTATTTGACAGGTCTTCGATGACATATTAATCCCTTAGAATAGTTGTACCTGTACGGCAGTACGTATTAAATATTTA GCCCACTTGTTGACTGAATCATCACCCAGGATATTATCAGTTCTTGCCCAACCAGTGAAATTGGGGCCTTAAGATAGGGT TTGGAATTATGGAGAAAAGATAAGAGATTGAACCATGCGTGAAAATTTTCTACTCTGCGGGAGGTTACCTGATGAAGGTG TTCTCATCAAAGAGCATGACTACTGGAGAACTGGTAAAGCTTTAAAACAGGATTACCTGCCCACATTTCAGAGTGCTGGG AACTGAGTTATAAAATGTATTGCTCTTTCAATTATGCAGATATTGAAACAAATGGTCTTTGAAAGTATGTCGGGCTTCCA TTTGCATTCATAAGCATAATCTGAATTACTGAAGTGAACAATTAAACAAATGAGATAGGAGGTTTTGGATGATGTCCTAT GATGTCCTTATGATCAGACTTCTCATCTTTATTATATGAAAAGTGCTCTATCTTAAGCGCCTTTTAGTATTTTGTTACCG TCACGAGTTTATTTGAAAATCTGATTTGTGAATATATGGAACTTAGAGGTTAAAGATCCGTGCATTTAGAAGATTTATTT AATATATCCGTGTATACCTTTCTATAAGCTTTATGAAGGTCTAAAGTTCAGCTGCATATTGTCATGTTTGATGACAATTG TGTAAAGTGATCATATTACCATAGTTCTTGCTTAAGCTGACAAGTTATTCTTATAGTCCTACAGCTTGTGTATTTATTGC AAAAAACACAGTTATTTGGATCCAGTAATTGGGGTTATAGTGAAGCATGAAATGTGTCAATTGAACTTTAGAAGTTACAG GCTCTTGTAATATGCCAAAGCTTATATTTGGAAAGCTGCTTATTGATTTTATTTTCCCCTTTTTTTGCATTTTCTTAATT AACATCACCTGAACCCCTTATTCACACCTCAACTATATCTCCCATTTACTTTTGTATGGGTTGATTGTTGGTATTATTTA ATTTTTTTCCCTTAATAAAATTCATATTGTTTACTGATAAGTGATAACAATGGCATCAACTTAAACTGCTAAGATTTAAA GTGATTTTTTGTATATGTATATACATCCTTTAATTCATTTCGCTAATATATTTAGAAGACTATTGCTTCTTTTATATGAA TAAGACATTTATATGAATAAGACATGTTGACTGCAGTGCACCATTGTTTTTTAATTGGATCGATGTTATGTTTTGCTTTT TTATTTAACAATTGGACTTATTGTACAGGTTTCTTCTTCCAGCATCACTTATTGTCATTAATGACATTGCTGCTTACATC TTTGGTTTTTTCTTTGGAAGAACCCCTTTGATCAAATTATCTCCAAAGAAAACTTGGGAGGGTTTTATCGGGGCATCCTT TACCACCATTATCTCTGCATTTTTGGTGAGAACAATTTAAATTTGTTTATGAAGTTGCAGTAAATGGAAATGACTTTTTT TTGGGGTTTAATCGGGGCATCCTTTGTCATTGAACCAGAATACTTGGTGATGTTAAATATTCCTAGCACTGTACTATTAT TAAATGATTGCAACAGCCTAAATTAACTCTGAAAGCTTTAATGGCACTTAAAGTTCTTGCCTTAAATCTTTATACATCAG TCAACTTATTGTCAATTGGATCTTAATATTATTGTACAAAACTCTTTTTGTAGCTTGCTGACATCTTGGGTCATTCTCAA TGGCTAACATGTCCAAGGAAGGTAGCTCTGTGACATACCATAACTCATTGATATATTATAAGACATTAGTATTCAACAAC CAGCTAATGTTCATGTCTCTGGAAAAACACGCAGGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCAATGTTTA AGCCAGAATCTTACACTTTACCAGGATGGATTTCTCAGTGGGTAAGTATTGAACATTCAGGCTAAAATTTCCTGTAACTT GCAAGAATATCCACTAAACAGGTGTGAAACTTCAATACATGGATGTGAAATTAAATCGGGCTAAACAAGCACTAGTGAGG TTGAAAGTAGTTGGGTCACTACTCAGATAGCTGTCATATGACTCGCACTCAAATCGGCTCAGTCATTAACTGTAGCCTAT TTTTATTTTTCATTCTTGGATGAAAGTGTCATTAAAAAAGTATCTCTTATTTAATATGGAATTGGAAAACCAAAACTTCT ACCAACCACTTCATGTTTTACATGTTTTATTTCCAATTTACAGTACAGCTTATAAAACATGATCGTACTGTAATCTTGAA ATGCCAATCCAGGTTCCTGGAATTTCTGAAAAATCATAACTTGTGACATACTATGAGTTGTTCTATGCAGTTTGGTTGGA AAGAGGTATCAATCCTACCAGTTCAATGGCATGCTTTATGTCTTGGCTTGTTTGCTTCAATTATTGCACCTTTTGGAGGC TTCTTTGCAAGTGGTTTCAAAAGGGCTTTTAAAATAAAGGTATGCTCTCGGTACTTTTGTTTTTCTAATCAGGAAATGAG AAAATATTATCCATTTAGGTCAGGCATAAGGTGACAAAAAAAAGGTCAGGTATGAACAGATTTGCTGCGTGTTCCCATTT TTGCAGGACTTTGGTGATAGTATTCCAGGACATGGTGGGATGACTGACAGAATGGATTGCCAGGTAGACTCTCTTGTTTC AATCTACAAATTTATTTTAATTTGGTCATATTTGACGGAGCTTCATCATAATATAGTGCGTTATGTGCTATATGTTTAGT GGAAGGAGCCTCATTGTCCCTACTGAATGGACATTTAGACCCACTCTAACTGAAAAACTAGCAGACTGTTAATTCCAGTG CGAAGTCAAAATATCCTACGGATTTTTGATGAACTTAACCAAACAAAAAAAAACTTCAATGACAAATAATCATGTGCAAT TTGTAGAAGTCTCTTTTGTCCAGTCTAGTGATATGTCTGTTGCATATTGTCTAGAACAAAGTATGATCTAATATAACTGA GAATGGTTCGAGTTATTTATGCAGATGACCGTTTATCCACTTGTATTTTTTGTGCCTGTAGCTTATTTGTAGAGCCACAA AATTTCCTCCCTCACTACTTATAAGTTATATCTTGTTGCCCTCATATGCATCCTGTTGCCTGTACCCTATTTTATCTTCT GTCTTATTCATTTCATTAGTCCATGCTAGGATTGGAAGTTAAAACCATTGTTGATGTATAAGTCAAGCAGGATTTGACCG ATTTGTCCTGATGCAGATGGTTATGGCCGTGTTTGCGTATATATATCTTCAGTCATTTGTTGTGTCTCAAAGTTTGTCAG TTGAAACGATTTTGGACCAGGTATTATGTTTATTTTGTTATATATATTACTCTGTACTTCTGTTTAATATTTACATCAAA GTTTTATATGCTTATGTTGCTACCGCTGGTCGCTTCAGATATTAATGAACCTGACATTCGATGAACAAGAAGCTCTATAT AGGAGGCTTGGGGAAATGTTGCAACAGGGGATTCAAAGGATGTCTTAG
CDS sequence (LotjaGi2g1v0074100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGCATGGTGATTTATTTTGTGATGTCTTTATCTCAGGTTATTCCAGAAGTTAGCAAAGCGAATGGAACCAAGTT ACTTGTTAATGATAAAAGCAAGTATAAGTCCATGCTAATTAGGGCATATTCATCCATTTGGATGATTGGGGGGTTTGCAT TGATCATCTATATGGGTCACCTCTACATTACTGCAATGGTTGTTGTTATCCAAATCTTCATGGCAAGTGAGCTTTTCAAT CTACTCAGAAGAGCTCATGAAGATAGGCAGCTGCCAGGATTTAGGCTATTAAATTGGCATTTTTTCTTCACTGCGATGTT ATTTGTTTATGGACGGATTCTGAATCAGCGTTTGGCTAACACAGTAACTTCAGACATGGTTTTGTATCGACTAGTGAGCA ATCTTATTAAGTATCATATGGTTATCTGCTACTCCCTGTACATTGCAGGATTTATGTGGTTCATTCTCACATTGAAGAAG AAGATGTATAAGTACCAATTTGGCCAATATGCTTGGACACATATGATTCTAATAGTTGTATTTGGCCAGTCATCCTTCAC TGTGGCAAGCATTTTTGAAGGGATTTTCTGGTTTCTTCTTCCAGCATCACTTATTGTCATTAATGACATTGCTGCTTACA TCTTTGGTTTTTTCTTTGGAAGAACCCCTTTGATCAAATTATCTCCAAAGAAAACTTGGGAGGGTTTTATCGGGGCATCC TTTACCACCATTATCTCTGCATTTTTGCTTGCTGACATCTTGGGTCATTCTCAATGGCTAACATGTCCAAGGAAGGATTT GTCAACTGGTTGGCTTCACTGTGATCCTGGTCCAATGTTTAAGCCAGAATCTTACACTTTACCAGGATGGATTTCTCAGT GGTTTGGTTGGAAAGAGGTATCAATCCTACCAGTTCAATGGCATGCTTTATGTCTTGGCTTGTTTGCTTCAATTATTGCA CCTTTTGGAGGCTTCTTTGCAAGTGGTTTCAAAAGGGCTTTTAAAATAAAGGACTTTGGTGATAGTATTCCAGGACATGG TGGGATGACTGACAGAATGGATTGCCAGATGGTTATGGCCGTGTTTGCGTATATATATCTTCAGTCATTTGTTGTGTCTC AAAGTTTGTCAGTTGAAACGATTTTGGACCAGATATTAATGAACCTGACATTCGATGAACAAGAAGCTCTATATAGGAGG CTTGGGGAAATGTTGCAACAGGGGATTCAAAGGATGTCTTAG
Protein sequence (LotjaGi2g1v0074100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSMVIYFVMSLSQVIPEVSKANGTKLLVNDKSKYKSMLIRAYSSIWMIGGFALIIYMGHLYITAMVVVIQIFMASELFN LLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILNQRLANTVTSDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKK KMYKYQFGQYAWTHMILIVVFGQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGAS FTTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVSILPVQWHALCLGLFASIIA PFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYLQSFVVSQSLSVETILDQILMNLTFDEQEALYRR LGEMLQQGIQRMS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| PIRSF | 11 | 411 | 401 | 1.6E-163 | ||
| PANTHER | 14 | 409 | 396 | 9.2E-238 | ||
| PANTHER | 14 | 409 | 396 | 9.2E-238 | – | |
| Phobius | 17 | 22 | 6 | - | – | |
| Phobius | 23 | 45 | 23 | - | – | |
| TMHMM | 39 | 56 | 18 | - | – | |
| Pfam | 40 | 370 | 331 | 6.5E-87 | – | |
| Phobius | 46 | 75 | 30 | - | – | |
| TMHMM | 61 | 83 | 23 | - | – | |
| Phobius | 76 | 95 | 20 | - | – | |
| TMHMM | 96 | 115 | 20 | - | – | |
| Phobius | 96 | 115 | 20 | - | – | |
| Phobius | 116 | 134 | 19 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 135 | 158 | 24 | - | – | |
| Phobius | 159 | 169 | 11 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 170 | 192 | 23 | - | – | |
| Phobius | 193 | 197 | 5 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 198 | 220 | 23 | - | – | |
| Phobius | 221 | 231 | 11 | - | – | |
| Phobius | 232 | 251 | 20 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 252 | 306 | 55 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 307 | 327 | 21 | - | – | |
| ProSitePatterns | 328 | 354 | 27 | - | ||
| Phobius | 328 | 413 | 86 | - | – | |
| TMHMM | 360 | 382 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatidate cytidylyltransferase activity | Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi2g1v0074100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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