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LotjaGi2g1v0074800.1

Overview

Field Value
Gene ID LotjaGi2g1v0074800
Transcript ID LotjaGi2g1v0074800.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|K7LXV5|K7LXV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0074800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:19588718..19596068) extracted from Lotus japonicus Gifu genome v1.2.

AAAACATTACGCGAACACAATAAAGGCATATACAGTTACCAAAAATGAGCTAAATGTCAACTTTTCAAATTTCAATAACA ACTTATCATTATTCATTTTTAATAACTGGTTTGTTTGCCCAAAATAAAACAAAACAAAAATTTCAATTTTTAGTTATTTT TTTTCTAATTTTACACAGTCCCTTCGTCTTTTGTCTGGTTTCACTGAGTAGCGGTCCTTTCGAAGCTCCCTTCTTTGATC AGAAGCATCAGCATAGAGAGAAAGAAACCAAATCCCAATACCAAAATTTCACTTTCAATTCACTGATTTCAGAAACTTCA TCACCCTTTTTCTCACTTTCACTACGGTAATCCATCTTTCACTTCTTTTTCTTTCACAAATTCCTTTGCTTGCATGCTAT TCTATTGTTTATCTCCCTCATTGGCGTTTTTCTACATTTTATATATGCATTTTTGAATAATTAAAGTGTTTTGATTTTCT GGGTGTTGGAATTTTCAGTAGCAAAATATGCAGGCTTCAACTTTTGCCTTCAAAGGAGCCATCTTGGGGTTTCAGAAGCA AAAGGGTTTGGTGGGTATTGGTGAGTTCAGAAATGGGAGTGTTCTTAGACCCAAAAGAGCTTGCATGACCAAGAATAATA ATCTATGTGGCTCACGGCTTGGTTGTGTCAGCATGGAAACTGAGCTAACTAGTTCAAGAGTTGCTTCTAGTGGCGTTTTT AGGTCCTCCGCTAAGCCCAGATCAGTCAGGGTTCACGCTTCCGGTTCGCATACTGTTGCTGATGACTTTTAGCTTTTCTG AAACTTATTGGACTGCATTTTCCAAAGATGTGTAAAGTGCGTGTCTCATGTAGATCAGGGTTTTAAATTGCGGCTGCATT GCGGACAAATGCAGGTTAAAACGGCCAGAATTGCGACAAATGCATGTTGAAATGGCCGTGATTGCGATTGATTGAACTTT AGAACCCGTTACATTGCGGACCGCAATTTAGAACCCTGATGTAGATGGGCCATAGTTTGTTTGGTTGATGATGCCCTGTT TGGCCTTCTTGGCAAGATTGTTTATGTAGTGTTTGATTTTGTTGGTTGTCTAGTTGTGTATGCTATTTGTGTTCGAATTG TTGCTTTTGTTGATTAGTATAGTTCAGTTTGTTGATATCATGGTTTCTAGTCCAGTTGATTCATGAATGGTTAACTTCAA CATGGTTGCAATAGTCAGGCTTACGCTTATGCAATTCAATTTTTTGGAATTCTTTTGCTAGACTATATGAAGAGAAAATT TATCCTTTGTAATTGCCTTTTATCCATTGCGGAATCTTAATATCATTAACATCTCCAGATCCAGAGTATTTTTATATTAA TATGCTTACATTGCTTTTAGGGATGCAAATTGTCTATACAAGACTTAAATTTGCAAAGTCTCTTAACAGGTTTTCAATGT TTCATTTGCATACTGTGTGAATGTTGCGTTCTTATCTATTTCATAGATTTTTGTGCTCTTACAAATACTCATAGGAACTA AAATTGAGTTTCAGCTGGAGATATTGAGGATGTTGTCCCCGCTGTCCCTCAGGGAAAATCTTCTGGAACAGTTCTTCCCT ATGTTGGTGTTGCGTGCCTCGGAGCCATTTTATTTGGCTACCATCTTGGGTATGGATAGCCTCTTGATTTGAGTATGTCT GGATTGTGGACTACCTGACTATACTGCTGCCTGCCATTTTCTTTATAATTTCATCCAACTTCCAACTATTATGAATAATA TGACTCCCTTCTATTTGTCTTAACTTTTTGGCTGCAAATATTATAAAGAACTATTACTATATGCGTGGATAGCTATAGTG ATGTCCTGTTTTGTATAGGGTGGTGAATGGTGCTCTTGAATACCTTGCTAAGGATCTTGGAATCACTGAAAATACTGTTC TACAAGGTACTTGCTTTTCGAAAAGATATATATATTTAATTTTAGATTATTTAAAAATTTCTGTAGATTTTTCAGTGAAT GAAAATTGTCGATTACTAGACAAATATATGAAAATACTTTTACTTGTTTTATAATTTTATTTACTCATATATTAACAATA TTTCTGTTACATAAGAAGAAAAATTATTGATCTTTATGGCAGAAAGTTAAGTTCAATTTTTGTTACTTCTGTTCATGTGT GAATATTTGTGCCTGTTACCTTCTAACTTCTTTTTTCCCCCAAAGATACAGCTTTTCTTGTATATCCCAATCGATGTTAT CTGTTGATCCTCATGAGTGTGAACCTGTGAACAGGTTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTTGGTTCATT TACTGGTGGAACATTGGCTGACAAATTTGGCAGAACTAGGACATTTCAGTTAGACGCAATCCCTCTAGCGATTGGAGCAT TTCTTTGGTCTGTTGGTTGCTGCTGAGTAAAAGTTTGATGTATTTTCAAAATCTGATGGGTTAAACTCTGGTGTTTTTAC AGTGCTACAGCCACGAGTGTTCAGACAATGATCATTGGTCGATTGCTTGCTGGTATTGGAATTGGTGTTACATCTGCTAT AGTACCACTTTACATATCTGAGGTGGTGACTTTGTGAATTATTCTAGTCTTTGTGATTATGATTACATATTTCGTGTGGA TCATGTGGGTCACCCCTTCTAATGGGCAGATTTCACCAACTGAAATTCGCGGTGCGCTTGGATCTGTTAATCAACTTTTC ATTTGTATTGGGATTCTTGTAGCACTGGTAGCTGGGCTGCCTCTAGCTGGAAACCCTACATGGTATTGAATCATTTCAGC TTCTTGTTTTTTCTCTTTTTTTTTCCGCGGCGGAGGATAAAGTCTCTTCCACCTAATCTCTTCCTAATATGTTTATTTCT TCTTATGTTAGCAGCAGAATTTAACATGCATATTCGAGTCTCGAGATTGAAGTTACTTTATTCACTGTAAAAGAAAAAAA GAAAATTACTTCTATTACTTAGTCCAGGCTTTTGTCAAATAAAAAAAGTCAGAGCAGAACATATGTGCCTAGAAGAGAAT TTGTTAAGATTATAATGTTTGGCCCAATCCATAAGTCCAAATATTTTCTCAAGAAGAACTGATGTTAAGGTTATGACTGT TCACAAAAATAGTTAATTATTTTTGGATAGTTTTATTTCTTTGGTTCAGAAATATGACTACAGATGTCCCATTAGTTGTT GCATGTTTTTATATTGTTATCATTGTTGACACTAAGGGATTACAGATTTAGAGTCCTGGAGACATGTATCTTGTTTCGTT TGCTGGGTTCTTTTTCCCCTGTACATACCATGGTTTTGAGGTACACCTAGTACCCCCTAATTTATTTGCCTTATCAAAAA AAAAAAAGAGTTGTGGACACATGCATTTAGGTAAAAGTCTGTCGTAAATTCTTGTTTTCGGAATTGAAATTTTGCTACTA TACTGAAGGATAAATTGAAGTATTCAATAAACAAAATGCAAATTTGATGTATACAAAATGATATTAAATTTATATTTTTT ACAGGAGGGCTTATTTTTCTTAATTGTTTGAGGTTGATAATATTTTCAAATTCAATATGTCTTAATTCACTGTAAATTTG TACTCCTCTACACATTTTTCTTTGTCTTTTCAAAACAAATCTTCCAGGCTGATTTGGTTGTGTTTTTTTATTTAATATTA AAATATTGATTTATCATCTTCATGAATTTTCTTCACTTATTGGGATAAGGCTTTTGTTTTGTTTTGTTGTTGTTGTTATT TTCATGGTTTTTAATTTTACTTCTTCTTGGAGGCTTCAGGATCCTCTGTTGGTCAGTTTTCTACTTTTTCAGCTGATTTA TTTTGTCTATTAATTTGATCTTATCAGGTGGAGGACAATGTTTGGTGTTTCTCTAGTTCCATCTATACTATTAGCACTAG GGATGGCAATTTCTCCCGAAAGTCCCCGCTGGCTTTTTCAGGTTTGCCTGCAATTCTATTCTGTGCATCTTTTGTTGTTG AAGCAGTAAATTCATGACAATAAAATAATTGGAAAGAAGGATACTACTTTTACACATGTTAATGGCTTTTTTTCAAATAT TCCTATCTTGAACTTAAATGGCTTGGATGTAAAGCACATTAAAGTAGAGATTATATTTGTATTGTATTTCATATATACTA ATGGCACTGACAATTTCCTTAAATTCTTACTTGTGTTAAAATTGTAAGAGTCATGATAGTTGATACTTGATAGTACTATT TTGTAATATAATCCACCAGAACATACATATTATACATTTGTGCTATCTTGTGATTTGTATATCTGTTAACAGTTTAACAC AATAATTTTTTTGTTGGTTTTCTGAGAAATTTGCATGTATTATTATTTTACAGGAAGGAAGAATCTCAGAAGCTGAAAAA GCTATCAAAACACTATATGGTAGTGAAAGAGTTTCTGCAGTTATGCATGACTTCAGAACAGCAACTCAAGGCTCTTCTGA ACCTGAAGCAGGGTGGTTTGATTTGTTTAGCACCCGATACTGGAAAGGTATTCCAAATTTCATTTAAATTGTATATGCTA TCGAATTTTTATTTAAGGAGGTCCAAAGTAAAAACCATATCACTTTGTTTTCATTTTATCTTGAATACCACAAAATCTAG CCGTTGTAGCCCAGGACCTTATAACCCCCATATTAGAATCTCATACGTCTAATGTGAGACTCAAGTTCCATACCTTACAA TTGGATCCTAACAAAACCTAAACGAAATACATTAGTCAGGTTTGATAATCCATGACCCTTTGCTTTCGTTGAGGCCCTTC TTTCATATCTGAAATATTTGAACTTTTGTGTTTGATTTCATTGAGGCCCCTTTTATACCTGAAATATTTGTATCAAGAAT CATTTTAATATCATAATCTTATTCGCAGCCCAACTTCCTCTTTACTTTTTACTTTACTTCATAGCTGATTAAAGCTTTCT TTTATGAAATGGTGTTGCAATTCCCTGAAACATGTCTTGTTGCAGTTGTCAGTGTTGGGGCAGCGCTTTTCTTGTTCCAG CAGTTGGCTGGAATAAATGCCGTGGTGTATTATTCAACCTCTGTGTTCCGTAGTGCTGGAATCGCTTCTGACGTTGCAGC AAGTGCCTTGGTTGGTGCTTCAAATGTTTTCGGTTAGTATTTTTGAATAAAATATTTATCATGTCTTCAATTAAAAAAGG TTAGTGTACATGTTGCACTTCACAAACATAATGTTGTTTCTGACTGATGTTTATTTTGTCGCAGGAACTGCTGTTGCTTC CTCCTTGATGGATAGACAAGGAAGAAAAAGTCTCCTTATCACAAGCTTCAGTGGAATGGTAATAGTTATTTCCAGTACAC ACCTATATTAGACCCAAAGCAGAAAAATTGTGATATATTACATGATTGATTAGTTATATGCTTGAAAGTCTGAAACAACA CGAAGTTAAACATAAAATGTTGATTTTTGTGAACCCAATGCTTTGAATATCTAAAATTGTCTGAAGTAGAAGAATGAAAC TTTTTCATTCTCACTTAGGGTGGAGAGAAGAGAGAGATAGATAGAAAATGGAGGTGGAAATGGAGTGAAAAATGAAATGA GTGTGAATGAGTCATAGCTCGTAAATAATATATATATATATATATATATATATATATATATATATTGCACTACTATAGTA TATAGTACATAGTGCATGTGAGATTAACGTGTCCAAATAGAGATTTGTGCTTGGAATGAAATTTTGGAGATCCAAGCATT TTGATAAGATTGAGACCATCACCTTTCACTCTTTCAGTCTTCAACTGAACTATGATACACCAAATGCTAGAAAAGTACGA AAACATGTTTTTGTTTGGTGTAAATGCAATTAATCTATATTTTTATCCCAATGGCTTAATTTCATTTCTTGTTTTGTGTA ACTTATTCATCTCATAATCGGTGAAACACCCTGTAAATTTTTATTCATGTAACTGACAGTCTTTTCTTTATTATGTATTT CCTAGGCTGCTTCTATGTTGCTTCTTTCTCTGTCTTTTACTTGGAAAGTCCTTACACCATATTCTGGCACCCTTGCTGTT CTTGGAACTGTTCTGTAAGTCACTTAATTTAGTCAATACTCAATAAGATTGAGTCACTGATCATCCCATTTACTGAAAGA CCTAAAATTTAATGAACCTAAAGATTATTACTGTTGTTGTTGTTATTATTATTATTATTATTATTATTATTATCATAATT ATCATTATTATTATTATTATTATTATTATTATTACTTTTCATTAATTTTAGTTGACTTTGTGATTATGACTTATGATCAG CTATGTCCTATCCTTCTCTCTTGGTGCTGGTCCTGTGCCGGCTCTTCTTCTACCAGAGATATTTGCTTCTAGAATTAGAG CAAAAGCAGTTTCTTTGTCATTAGGCATGCATTGGGTGAGTGACTTCACTGTGGAATCTAACATTTGCTTCTACAAGTGT TAAGTTTTAAAGTTTAAACTCATTTCAAAATTCACAAAAGTTACTGTTAAGTTTTAAATTGACAAGAATTTAATTGAAGA AACATCCGTAAATCCTTGCTTAATGTTATCTAGATTAATATGATTTATGCTATAAAGGTTATTACTACGCTATTCTGGTT TTCTTGATTGATGAAATGTTATGTTAACAATGAAATTATGGGTTTCTTTTTGTCTTATATATCAGATCTCAAACTTTGTC ATCGGGCTCTATTTCTTGAGCGTTGTAAACAAGTTTGGTATTAGCTCCGTGTACTTGGGGTTCTCAGCCGTCTGTGTTCT TGCTGTTCTGTACATAGCTGGTAATGTTGTGGAAACGAAGGGTCGGTCATTGGAGGAAATAGAACATGCTCTTAGTTCTT CTTCAGCTTGAAAAAAACTTGTAGAAATTGCATTGGTCATAATTTCAGTGCTGCTCATAGAACTGGTTTGCCTTTGTATG TACACTTGCTACTTACTCTCTAGGGTGAACATTTGTCTGGCAAGAGTGGTAAACCATGGTAAGTTTGTAACCAAATTTTG CTAGTTTGCAAATATGGGAATAATAATGTGTGAGAAGCATCTTTTCGAACTGAGTTTTTGTCTCAGTAAGAACGTCTTCA CTTCAATTGTTAGATGGAAAAAGTTGAACCATGTAACTTAAAAATTCGATATGATTTTCTTGAGTTTCCTTTAAGAAATA TTAACATTTGTAGAATATTGAAGTGAATTAGCTGCAACGTGACAAAATAACTAGTTTACAATAATGTGTTCAAACAAGTT TGCAACGGAAAAAGACAATGCTAAAACAATCCCGATCACAATGCTAAAACGTGAATGAAGCCGGGACCATC 

CDS sequence (LotjaGi2g1v0074800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGGCTTCAACTTTTGCCTTCAAAGGAGCCATCTTGGGGTTTCAGAAGCAAAAGGGTTTGGTGGGTATTGGTGAGTT CAGAAATGGGAGTGTTCTTAGACCCAAAAGAGCTTGCATGACCAAGAATAATAATCTATGTGGCTCACGGCTTGGTTGTG TCAGCATGGAAACTGAGCTAACTAGTTCAAGAGTTGCTTCTAGTGGCGTTTTTAGGTCCTCCGCTAAGCCCAGATCAGTC AGGGTTCACGCTTCCGCTGGAGATATTGAGGATGTTGTCCCCGCTGTCCCTCAGGGAAAATCTTCTGGAACAGTTCTTCC CTATGTTGGTGTTGCGTGCCTCGGAGCCATTTTATTTGGCTACCATCTTGGGGTGGTGAATGGTGCTCTTGAATACCTTG CTAAGGATCTTGGAATCACTGAAAATACTGTTCTACAAGGTTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTTGGT TCATTTACTGGTGGAACATTGGCTGACAAATTTGGCAGAACTAGGACATTTCAGTTAGACGCAATCCCTCTAGCGATTGG AGCATTTCTTTGTGCTACAGCCACGAGTGTTCAGACAATGATCATTGGTCGATTGCTTGCTGGTATTGGAATTGGTGTTA CATCTGCTATAGTACCACTTTACATATCTGAGATTTCACCAACTGAAATTCGCGGTGCGCTTGGATCTGTTAATCAACTT TTCATTTGTATTGGGATTCTTGTAGCACTGGTAGCTGGGCTGCCTCTAGCTGGAAACCCTACATGGTGGAGGACAATGTT TGGTGTTTCTCTAGTTCCATCTATACTATTAGCACTAGGGATGGCAATTTCTCCCGAAAGTCCCCGCTGGCTTTTTCAGG AAGGAAGAATCTCAGAAGCTGAAAAAGCTATCAAAACACTATATGGTAGTGAAAGAGTTTCTGCAGTTATGCATGACTTC AGAACAGCAACTCAAGGCTCTTCTGAACCTGAAGCAGGGTGGTTTGATTTGTTTAGCACCCGATACTGGAAAGTTGTCAG TGTTGGGGCAGCGCTTTTCTTGTTCCAGCAGTTGGCTGGAATAAATGCCGTGGTGTATTATTCAACCTCTGTGTTCCGTA GTGCTGGAATCGCTTCTGACGTTGCAGCAAGTGCCTTGGTTGGTGCTTCAAATGTTTTCGGAACTGCTGTTGCTTCCTCC TTGATGGATAGACAAGGAAGAAAAAGTCTCCTTATCACAAGCTTCAGTGGAATGGCTGCTTCTATGTTGCTTCTTTCTCT GTCTTTTACTTGGAAAGTCCTTACACCATATTCTGGCACCCTTGCTGTTCTTGGAACTGTTCTCTATGTCCTATCCTTCT CTCTTGGTGCTGGTCCTGTGCCGGCTCTTCTTCTACCAGAGATATTTGCTTCTAGAATTAGAGCAAAAGCAGTTTCTTTG TCATTAGGCATGCATTGGATCTCAAACTTTGTCATCGGGCTCTATTTCTTGAGCGTTGTAAACAAGTTTGGTATTAGCTC CGTGTACTTGGGGTTCTCAGCCGTCTGTGTTCTTGCTGTTCTGTACATAGCTGGTAATGTTGTGGAAACGAAGGGTCGGT CATTGGAGGAAATAGAACATGCTCTTAGTTCTTCTTCAGCTTGA 

Protein sequence (LotjaGi2g1v0074800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQASTFAFKGAILGFQKQKGLVGIGEFRNGSVLRPKRACMTKNNNLCGSRLGCVSMETELTSSRVASSGVFRSSAKPRSV RVHASAGDIEDVVPAVPQGKSSGTVLPYVGVACLGAILFGYHLGVVNGALEYLAKDLGITENTVLQGWIVSTLLAGATVG SFTGGTLADKFGRTRTFQLDAIPLAIGAFLCATATSVQTMIIGRLLAGIGIGVTSAIVPLYISEISPTEIRGALGSVNQL FICIGILVALVAGLPLAGNPTWWRTMFGVSLVPSILLALGMAISPESPRWLFQEGRISEAEKAIKTLYGSERVSAVMHDF RTATQGSSEPEAGWFDLFSTRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFRSAGIASDVAASALVGASNVFGTAVASS LMDRQGRKSLLITSFSGMAASMLLLSLSFTWKVLTPYSGTLAVLGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSL SLGMHWISNFVIGLYFLSVVNKFGISSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSSSSA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 104 104 -
PANTHER 62 544 483 6.2E-275
PANTHER 62 544 483 6.2E-275
TIGRFAM 86 538 453 4.7E-103
SUPERFAMILY 94 539 446 2.09E-64
Gene3D 99 544 446 6.6E-123
Phobius 105 125 21 -
TMHMM 108 130 23 -
ProSiteProfiles 108 531 424 52.425
Pfam 111 540 430 2.2E-106
CDD 111 529 419 9.77966E-139
PRINTS 116 126 11 1.9E-23
Phobius 126 144 19 -
Phobius 145 165 21 -
TMHMM 145 167 23 -
Phobius 166 176 11 -
Phobius 177 195 19 -
TMHMM 179 196 18 -
Phobius 196 200 5 -
TMHMM 200 222 23 -
Phobius 201 222 22 -
PRINTS 201 220 20 1.9E-23
ProSitePatterns 206 231 26 -
Phobius 223 233 11 -
Phobius 234 256 23 -
TMHMM 234 256 23 -
Phobius 257 261 5 -
TMHMM 261 283 23 -
Phobius 262 283 22 -
Phobius 284 344 61 -
TMHMM 345 367 23 -
Phobius 345 369 25 -
PRINTS 356 366 11 1.9E-23
Phobius 370 380 11 -
TMHMM 377 399 23 -
Phobius 381 402 22 -
Phobius 403 408 6 -
Phobius 409 429 21 -
TMHMM 411 433 23 -
Phobius 430 440 11 -
Phobius 441 465 25 -
PRINTS 443 464 22 1.9E-23
TMHMM 443 465 23 -
PRINTS 466 478 13 1.9E-23
Phobius 466 476 11 -
TMHMM 477 499 23 -
Phobius 477 497 21 -
Phobius 498 502 5 -
TMHMM 503 525 23 -
Phobius 503 524 22 -
Phobius 525 547 23 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0074800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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