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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0080100 |
| Transcript ID | LotjaGi2g1v0080100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT2G07240.1 cysteine-type peptidase; Swiss-Prot: sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1; TrEMBL-Plants: tr|G7JUN2|G7JUN2_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi2g1v0080100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:21356288..21359594) extracted from Lotus japonicus Gifu genome v1.2.
CTCATATCCTCTTAAAACTTAAAAGTAGAATGATTTTCGTTAAAAAAATCAAAAAATCAATCCAGTGAGTATCGTCTGTG CAATCACAAACCCACTTACACTTTTCATCTTTATTCTGTCATCCTCTTAATCTCGATCAAATCCAATTCTCTTTCAGATC AATCTTTCCTGTTTTTTGCCGTAGATATCGGCTGCTGCTAGGGAAATTTATAATTTCCTCAATCTTTCCAATTTTTACAA CCCTAATCCATGGCTTATATGTACCTACACCATACGGTTCTCAGGGTTGAAGGTATTTGCATCCATCTATTTCAATTTGA GTTTCCACTATGGCGGGTAATGGGAAAACTAATAAGAGTCGGATCCCAAACAAACGCCAAAGGACAACTCCAACTCCAAG GCAGGAGACCAAGAGAAAACTGCAACCCGCACACGTGAATGACGTGATTGATATATCTTCCAGGTGAGTTCCTTGTCTAC ATTAATTTAGAACTCAAACATTTTTAATCTTTTGAAATGTGTTTCCAGTTTACATTCAGAACTAACATTCATTGTCTACA TTTATTTATTTATTTCAGTGCCCAGGAACGTTTTAACAAACCTGAAGAAATGAAAGACAATAGTGGCGTCCACCATTTGG TGAAGGAAATGTCAGCCGTGAAATCTTCCGTGGAATATCTGATGCGTGTTGTTAACAAATTGGCCATGACTGTTTTCCAA GATAGCCCACTGACATCTGGTTATCGAGATTCTACTATCATTACACCACTAGAAGAACGGAATTCCTATTCTTTGCCGCT TCACACAAATAATAGCAAAAAACATGCTGGAGGTACAATAATAGGGAGGAAGTTATTTGATCCCGAATCTGATGAGATCA TAGATTTGTACTCTACCCATGAGCCAGTGTATGGAATAAATATCGGTTTAAAGGGTGGAGTAAAAATTCCGGAGGTGAGC TTTAAGTGTGTTTTATTTTATAATTTTTATAAACAATTCTTGAATCTAACATATGTATGTACATGTATGTACAGTGGTTC CCTGTCATATATAGGCCTCCGGAAAACATTATTCTGAATCAGGTTGAGGCTGCAGTAGGAGCTTATATTTATGCGGATAG CAACTATACTGGATTAAAGGGGTATTTTTCGTTTTATATTCAAGCTATTATTATTTATATTTATATATATATACAAATAT TTAAAACTTCATTGTGTTTGGGTGTTGCAGGAGTGAAGTTCTTGTTCGAACAACAGATAAAAAGTTCAGCGTAGATAGAA AAGGGCTTAAAACACTACAACCTATGGCTTGGGTAGACCAAGATGTAAGAGTTATTCAATTTGTTATTCATTATCTTTTA TATAAGATAGCTTATATTTTAGACTCATGTGCAGGTACTAAATGTAGTAGTGTCAATGCTTACTAAACAAGATAGGTGCT TGGGTGACAAAGAATTACCGTGGTACTTACCCACAATATTTTCGGTAATTTCCCTTAAGCTTTGTCAATGATGTTAAATT AAACAAAATAGTCAACGTACATGTTTCTTTGAATTGGCTGTAGGAAAATTTACTGGATTTGGTATATTCCTCTGTCTGGT CCGATTGGCATGCTGATATTTTGTGGTATTTATCTTCAAAAAAACACATGTTTAACAACTTTATTTTTAATCACAGCAAA TTTTACTGATGAATAATGGAGATAAAGAAAAAGCTGATCTAATCCTGGTACAAGGATTCCCACATGGGAAGAATTGACAA AGTGGAAAAGGTATCTAGCTATGCCCAATAATGATAAAAATAAACATTGCTATCTAACTTACAACTTACAATTTGTTTGT GCTTGTAGATTTTTATTCCAATTAATGATGAAGCTAAGCACTGGTACCTAGCTATGATTGACATACCCAAACGTACGGTC TATATTCTGGACTCTCTCCCATGTCCATCAAGAGACATTGCTAGGAAGAGAAATGTCCAGAAATTGGTAAGTAACTATTT CATTCGTACTATCTACTTGCATACATCAATCTAACCATGCTTTATGTGCAGGTTATAATTCTGGATGAAATGTTATTAAG AGATGAATTTCAAAGCGAATGTAAGAAAGAGTTGGGACTTTGTGAGTTTAATTACATCCGGCCAGACAATGTTGGAAAAC AAGCAAATGACTCGTAAGAAATTATCATCTCCCTTTATATTCTACACTTTCTAATTTAATGTTTGTATGCATCACTTCAC TATGCATTCCCTCTTGACAGGAATGACTGCGGCGTTTGGGTTGCTACCTGGATGTTGAATAATCAATGGATGAAAGATTG CAGGATTAAGGTATATATATATATATATATATATATATATATATATATATATATATATATGTATATGTTCTTCTTGAAGC ATGTGATTTAAATTTTCTTAACCAGACTTATTCATCATTATTGTTGTAAAATTGTAGGTGACTAAAGAGACCAGATTTAG GATTGCAGTGGAGTTAGTCCTCCTGGATCACAACGAAATAATTGAACAACTTATGTCTTCAGCTCATACATTCTGGGACA AATATCAGAAAGAGAATAGCAATAATAGGGGAAAACGGAACTATTGACAATTTTGAATTTCTTTGAACTATGCACAAATT TGAATTTGTTTGAACTATGGAGAGTTTTGAATGAGTTGAATTTTCCTTGCTTTATTTTGGACACTTCCAGTACATGTTTG TATGGACTTCTGTTTTTGAATGGATTTTAAACTAGTTAGTTATTAGTTCTTTTTTCTTCTTTTGTGAAGTACTTCTGTTT CTCTGTTATTTATCATTCTTGTTGAGCAATACGAAAGGGGGGAATGTTTCCAATATCAATAAAGATAGCATGTATCCTTG GCTCTGTGCTTCCTTTGCTTGTGATATCTACAAGCACCCGTGTGCATGTAAGGTCAACATGCTTAAATAGTTTTTAATGC TAATATTTAACATGCGCGCAGTTCCTCAAGGATTAAATGCATGATTGATTTTGACAAAAAAGGAGTTGAGGAAGTGAAGT TCAACCATTCTATGTTTAGAAGGAATATCTCTAATGCTCAGGAAGTGAAGTCTGTGCAATTGGGTGGACCAATTGGTACC TCCAAGACTGGAAGAAAAGAGCTGCAGCCTTACAATATTATTGCAATTGGTAGTCAGGATCGAACTATAACACTGTGGAC TACTTCAAGTCCCCGCCCTCTATTTGTGGCTAAGCATTTTTTTACTCAGGCTAAGTATTTTTTATAACAGTAGGAACTTC TGTTAAACCAGATTCTTTAATTTGTAA
CDS sequence (LotjaGi2g1v0080100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAATTGACAAAGTGGAAAAGATTTTTATTCCAATTAATGATGAAGCTAAGCACTGGTACCTAGCTATGATTGA CATACCCAAACGTACGGTCTATATTCTGGACTCTCTCCCATGTCCATCAAGAGACATTGCTAGGAAGAGAAATGTCCAGA AATTGGTTATAATTCTGGATGAAATGTTATTAAGAGATGAATTTCAAAGCGAATGTAAGAAAGAGTTGGGACTTTGTGAG TTTAATTACATCCGGCCAGACAATGTTGGAAAACAAGCAAATGACTCGAATGACTGCGGCGTTTGGGTTGCTACCTGGAT GTTGAATAATCAATGGATGAAAGATTGCAGGATTAAGGTGACTAAAGAGACCAGATTTAGGATTGCAGTGGAGTTAGTCC TCCTGGATCACAACGAAATAATTGAACAACTTATGTCTTCAGCTCATACATTCTGGGACAAATATCAGAAAGAGAATAGC AATAATAGGGGAAAACGGAACTATTGA
Protein sequence (LotjaGi2g1v0080100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRIDKVEKIFIPINDEAKHWYLAMIDIPKRTVYILDSLPCPSRDIARKRNVQKLVIILDEMLLRDEFQSECKKELGLCE FNYIRPDNVGKQANDSNDCGVWVATWMLNNQWMKDCRIKVTKETRFRIAVELVLLDHNEIIEQLMSSAHTFWDKYQKENS NNRGKRNY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 111 | 111 | 1.6E-15 | – | |
| PANTHER | 1 | 111 | 111 | 1.6E-15 | – | |
| ProSiteProfiles | 1 | 110 | 110 | 12.79 | ||
| Gene3D | 3 | 136 | 134 | 1.3E-16 | – | |
| Pfam | 5 | 104 | 100 | 2.8E-15 | ||
| SUPERFAMILY | 5 | 111 | 107 | 2.35E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi2g1v0080100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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