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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0083800 |
| Transcript ID | LotjaGi2g1v0083800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UBX domain-containing protein; TAIR: AT3G27310.1 plant UBX domain-containing protein 1; Swiss-Prot: sp|Q9LK22|PUX1_ARATH Plant UBX domain-containing protein 1; TrEMBL-Plants: tr|I1N7K5|I1N7K5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0083800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:23221282..23228273) extracted from Lotus japonicus Gifu genome v1.2.
ATCTAATATCATCCTTATAAAAAAAACTCATACTCGTTCTCGGCTATAGACCCAAAACAAAAGCAAACCTTCTTGCCACC TGCGAGAACCACGTGTAGCCGACATTCAGAAGCAAAAAAGAAAAAAAGAAAAAAAAGTAAAACGTATGAAATATACGAAA GGTGATTGAAGAAGAAGCATTATTCAGCTCTGCTCTCACTGTATTCTTTGATGCTCGGTGATACCTGGTTTACAATAACA TCGAAAAGAAGAAGGGTCACCGGTATTTGTTCCATGGTACTGTCAAGTCTTGGATTTTAATTAGATGATTTTTTTTTCTT TTCAAAATTTATTTTTTTAATTTAGTCATCTGTGTTTGCTTTATAATTGCCTTTTCTTATTTATCTGCTGAATATTTTGA GATTTCTTTTATGGGTTTGTTCACAATTTGTTTTTCTTGACTTGACATCGATATATATTTTCGTTTTCGGCGTGTTGAAA AATAGGATTCATTCAATCAGGAAATAAAACCAAAAAAAATTTATAAAAAAATTCGAGCAATTAATTTGATGCCACATGAG AAGTGAAAAAATTGCAGTAGAGAATAATAATCAGTTTAAGTACTCTTAAGTGGGTTTGGGTATTTCTTGTATATTCTCTT TCAATCTTGTTCATACCATCATTTGGTTCATGTGGTTGAAATGTGTGAGGTCAAACAAACCATGCCAATGAGGTTCATGT GCCCATTAAGCTAGTTTTAGTTAAATTAAACCATTTGGTGCATATCCTCTTGCTCTTCACATTTGTTCCATTAGTGATGA CTGATGAGTGATGTCTATAAATTGCCTATATCCACTCTAATTTAGTTGGCAGATGGTCTTCATGCCTGTCACATGAAATT TGTTTGTGTTAAAAACAGTTTGTGATTTCTGAGTACGCTTTTTTTTGTTATAGTAGTGAAGAGCCATAATTCCACATCTC TTATTCCCTGGAATAATTGTTATCTTTGGTCTTTTGTGAGGGCATCATGTCTATGAAATAATTATCTTTGGTCTTTTGTG AGGCTTCATATCATAGCATTGTTCCAGCGTGCATTTTTAATTTTCCTTATTTGTATCGCTGCTAACTTTTTATGGCTGAA ATTTAATTCTCTTGTATTATAAGGAGAGAGACCGAGAGAGATCAAGGAAGCAATTGATATTGAATTGCCTGAATGAATAG ATTACATCATTATTCATACATATAAGCCCAACATGAGCTGAAACTAACAATAACAGAAAACTAACTAATTACAACAGTGC TCAAGTGCACACTAGACTAATATCCTCCCCCCCCCCCCAGCTAAACTGGGTTGTGAATGAATCACACAAAGTTAGGTTGC TTCTTAAATTTGGAAATCTGATAGTAGGTAGTGGCTAGGTCAGTGCATCTGCCACTTGGTAATCTGCCGGAACATGTCTC ACATGAAACTTTTTACTGATGACCTTTTCTCTTACAAAGAATAAATCCAGCTCCGTATGCTCTGTCCTTGAGTGCAGGAT AGGGTTATGAGCTATAGAAACAATTGATAAATTGTCACATAACAATAAAGGAGTGACAGTTTTTACTTGAAGCTCATTTA ACAGAGATTGAACCCAAATTATTTCTTTTGAAAGATGAGTTAGAATTTTGTACTTAGCAGTGATACTCCTTGCAACTGTT TGTTGCTTAGACCACCATGAAATTAGGTTGGTTCCTAGAAAGAGGCTTGCTCCTCATGTTGATCTTGTATCATCAACATC TGTTGCCCAATCAACATCAGAAAAACCCTTTAGTTGAAGAGGAAATAAAGTTGTAGGCTCTAGCAAAATACCACCGGATA AGGTACCCTTTAGATGCCTAAATATGTGGAGAGGACATGAGCTGACAAACTTTATTCACTTGAAAACTTAATTCTGGCTG TGTGATGTAAGGTATTGAAGTGCACACACAACTAATCTGTATGGAGAAGGATCAGAAAAAGGAACCCCACTGGTTTTAGA TAATCTAGAGGTGCTGACCATAGGAGAGGAGATAGCTTGGCACTCTAGCATATTTTCCTTACTGAGTAGAACATAATATG CTGAGTGAGAATGAGCTGACCAGAGGGTAAATGCTTGACTTCTATTCTCAGAAGATAGTCCACCTTATGCAGCTGTTTGA GTGAAAACATGGAATTGAGTTGAGAGGTAATTTGCTGAACTAGAACAGAGGAACTTCCTGTGACTATAATGTCATCAACA TAAGGATAAAAACCACTGTTGAGTTTCTGGCTTTCTACTATATACAAAAAGAGAAGAATCACATTTACTTGAAGTAAACC CAGTTGTAAGAGTGCTGATTGTAAACTTTCAAACCAAGCTCGGGGAGCTTGTTTTAGCCCTTGGGTTGCCTTATTCATTC ACTTTGCACATCAAAACTTTATTTTCTGATGCAAAACATGGGGGTTGGGTCATAAAAACCACTTCTTGTAAAATCCATTA AAAAATGTATTGTTAACATCAATTTGCTGCAATGTCCAGCCCAAAGTTAGTGCTAGAGTTAACTCAGTTTAAGATTATTC TTATAGTAAATAGTCAAAACCAGGTTGTTAGTGAAAACCTTTAGCAACCTACCTAGATTTGTACTTATGAACAGTACCAC CGGGATTTTTCTTAATTCTGAAAACCCATTTGCTTCCTATTGCTTCTCGGTTAGGAGGAAAATGAACAAGAGTCTATGTA TTGTTTTTCACAAGAGCATTATATTCTTCAATCATTGCATTACTCCAGTTTTCATTAGCTAGGGCTTGCTTAATAGCAGT AGGTTCCACTGGGTGAGAAGAAGAGTGGGCTGAAGTCTAGGTTTTATGATTCCATTTTAAGACCTTGTTATCATTGGATG GACATTAAGAGGTGCAGAAGGAGAAGTCGTAATTTGCAGTTTTCAACTAAAGAGTGAACATTAGTCGTAATTTGGACAAC TTCGTTGTGAAATTTTATTGTTGTTGATAATTTTATTGGTGTAAATTCTTAGAATTTGGGTTAGGCCTAACTCCTAAAAA ACCTAGCTTAGAGGTGAGGGTTTCTCTACCCTTTATAAGGATTATTTTCGCCATATTTCTAGTCAATGTGGGACTTCTTA ATACACCCCCTCACGTCCAAGATATCCCAAAGTTATCTGTATTTTGCACCTGAGTGTGCGAGTGAAAGTGAGAGTGCAAC TTATCCCAAAGCTGATACACATGCTTGCACCTGATCATCTTTGTCAAGATCAGTGCAGAGTCTGTTGTTGGACCAGGAGA GAAGGAGCGCATTTTGTTGCTCCCAAAGAAGGTACTCATCGTTTAAAATTTCTTGCTCGCACTTCCTCTCTTCGAAACCT AGAAGGAATTCTAGTATTCACAAGATATAGATGAAGCCTGTGACCAGTAATAACTGGTTCAATTTGTTGTTTCCACAACA ACAAAATTCTTATTAGACAACTTTTCTGAAATTGAATGAGAAAAGGACGCTGCTCTAGGCATTGGAATTGCCATTTGATG TGGCGGAGGTGCAGAGGACACAGGATTAACTCTGATTGGAGATGTTCTTTGCGGAGGTGATGAAGGTGGAGAAGGAGAAC TGGCGGTTGCCATGGTTTCCCAGATTCAAACTCTTGATATCATATTAGAAGATGAGAGAGAGAGAGAGAGAGAGTGTGTG TGTGTGTGTGCGTGTTAGGATTCTAAATATTAGGGATTTTGTTTATTTTAATTTAAGAGTATCTTTTATTTTAGGAGTTG ATATTTATTTATTTTGGGTGGGTCATCTTTTAGATTAAGAGTATATTTTATTTTTGGAGTTGATGTTTTATTTTAGTAAT CTATCTTTATAGATAGGGTTTGATTTATATAAATAGGAGTAGTGTCATTAAGGGTTTTCATGTCTAGGAATTATTGAGTG GTAAGGGAATTGCCCTTGGAGAAGGTTAAACTTCTTATTTTTATTTTTATCATTTTCTTATTCAAAAAGTACCAAAAAGT AATCTTTTATCCTTATTTTGCTATCGTTTGGCTGTAAGGATTTACCGAACCTAACAGAGAGAGAGAGAGAGATATTGAGG GAGGGTCGAGTAAGTAATTGATATTTTAATGCTTGAATGAGTAGATTATATCATGATTCATTCATATAAGCTCATCATGA GCTGCAACTAACTATAACAGAAAACAAAGTAATTACAATGTATTATCCTGTGTGTTCAGGTGCACTGGACTAAAACTCCA GTACCTAGCACTTCAATGACCTATTTATTTTAGTTATGTATCCGCATGAGTCATGACTGCTTGCTCAATCTGTATTTTTT TCCGTGACATTTCTTTTACTTTCATTTTTCATGGCAAACAGGTCAGCATTGCAGATATAAGTGAAAGGTTTGGAAGAGAG ATTCGTGTTTTTGAAACAATGTCACTTTCTCCGTCACCAAATGCTGCAGCAAATACTGGTAATAGCAACTTAACTATGTT TATCCCACGGCCCTAAGATAAATATGTATTTAAATTTCAACTATAATTTCCCTTGCGTATCCTGATTAAGTTGTATTTCT TATTGGTATTTGGGAAGAAGAGCAGACGGATGACTTCTATGAGTTTACTGCTGAGGATTATTACGAAATGGTGGCTTCTA AAATGGCAGGTAAAATTGATCCCAATAATTCCATTTGAGCGAAGCAGTGACTATTGATCACAGGTTTTGACCCAATGTTC ATGACGTTTCTCATATGCCCAGTTTTCAAATTTTGACCACAAAAAAAAACCATGCATTTTTCCTATTAACAACAAGCTGA TTATCTAATAGAAGGTTGACCAGATGAAGATTTAAGAATAAATGATCAGATTGGTAATCAATAGTCTTTTTTGGCATCAT TGTCAGGTTATTAGTGCCATATCATACTGTATCCTATCCATATTCCCAAATGTTATTATTGAATCATATTACCTTCTCTC GAATTTTGGAACTATGCATCTGTATATTGTCATGTTGTTTCTGTTTGCAGTTGACAGTTAATAATAATGCATGTGAGAGA GATATGAACAAATTAAATGATGTACACGAAATCAGAATACCCCCCTTCATTCGTTATTTAAACATATTAAATATGGACAG ATAAATTCATGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTCGGTCCAGAATGACCAAAGTATTGTCTAGC TTCTTTTTGCCCTCCCAAAATCGTGATTATTACCCTTGAAGTTTTTCTGGTTCATATTGGATATTTTTCTCCTCTTGAAG GATCATAAGATTTTCATGAATATTAAAATAAATCAGATTAATGAGGGTGAACTTATATATTCATTTCATTTGATCTTGTT TGCAGGCAGTGATCAGAGTTCGCTTCCCTGATAATCAGACATTGGAGGCTACTTTTCACTCATCTGAAACAATCCAGAGT TTAATTAATCTTCTTAATAAATTAATTGCACAACCAGAGCAGCCATTTTATATATGTAAGCATATTGACTTCCGTATATG ATTAAATTTTGAATAATATACTTGTAAAGTGGTGCATACAATTGGAACTTTGCAGTGTGATCAATAGCATAATTGATAGT ATTTCATCTCATTTACTATTAGATTAGCATGCCAAAGCATCATCTTTTGATAAGGATTAACACATACTTAACCTATTGAT AGTTGATTTGATATTATGGACTGAACTTAAGCAAATCTTTGTACTTTTAATAATGTAGATACTACTCCGCCTAAGAAGGT GATCAAAGACATGTCTCAAGATTTCTATAGTGCTGGATTTTGTCCTGGTGCTATTGTGTACTTTTCATATGATGTTCCAA AAGGTGAGTTCCAGCTGTCAGGAATCATTTTCTAGAACATGTATCACTGATTTTACACATATAAGTTCTGATGTTCATGC CTTTGATGAAATTGAATCACTTTTCGATTTCAGTGTCAAGTTCGCTTCATTTTTTTGATATTTTGCTCTTTTAACACTGC TCGATTTACTGTATTTGCAAATTCATCATAACAAGACTACTACAAGTGTACATCCAATTAGTTAGTGTTGAACAGTTACA TATGGGCCATTGTAAATTGTATAACTCACTTGATTTTGTGTTTAACAATAACCACCTCTCTGATATATAAACCTTTAGGT GATAGTACTTTGGATCGCCAAGTTTTCCCGCACCTACTTGAAGAGGTCATGTCCTTGAAGGGTTTGGAAGTAGCAAATGA TCAAGGCAAGCCGTCAGAGCCAGTGCAGTCAGCGGTGCCGGTGCCCGCAGCAGAGGCAACACGACCTATTGCTGTGGAAG AACGTAAACCTGCTGAGAAAAAGTTTGTTAAACCAAAGTGGCTGAAAATGTGATATCACTTGTAAGAGTTTAGGGTAGCT CTCAGTGTACTACTGCATCTATGTTGTTATGGTTAATCACTTTTGTAAGAACTTTACCTCTTCCATCTAGAACTCAAAAA TAGATCATTTGGCAAGTTGTTCTTTATCTCTCAATTCCTGTAACACTATGTATGTAAAAATGATTCAATTTGGTAATACT TCTCATCATGGATCTCAATGTAGTGTATCATCATAGAATCAAAAGAATGGACCATAGTTTAGTTTATTTTCGCTTCCCTG CCCACCTTCCCCATTGTTTCTCTTCCCAAGTTGTCATGAATTTTAGATAACAAGTAACTAGCCCGTCAATGCACGGGTTT TATTTGTAATAAAAAAGTTATATTTTAAAATTAGGTTTAATTGCACTTTCAGTCCTTGATCTGTTACAATTGTATGATTT GACTCCCCAATGTTTAAAACGAGCGATCCCTGAATTTCTAATTTGTGAAAAATAGGTTTATTAGTCAATTTATCAGTCAA TTTCTAACTGACGTTGCTTATGTGGACATCATTAAAGATATGGTTATGACAAATTTGTTACCGGCATGTTAGTTCACTAA AAAAATGAAAAATAAAACAAAAAACTAAATGA
CDS sequence (LotjaGi2g1v0083800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCGGTGATACCTGGTTTACAATAACATCGAAAAGAAGAAGGGTCACCGGTATTTGTTCCATGGTCAGCATTGCAGA TATAAGTGAAAGGTTTGGAAGAGAGATTCGTGTTTTTGAAACAATGTCACTTTCTCCGTCACCAAATGCTGCAGCAAATA CTGAGCAGACGGATGACTTCTATGAGTTTACTGCTGAGGATTATTACGAAATGGTGGCTTCTAAAATGGCAGATAAATTC ATGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTCGGTCCAGAATGACCAAAGCAGTGATCAGAGTTCGCTT CCCTGATAATCAGACATTGGAGGCTACTTTTCACTCATCTGAAACAATCCAGAGTTTAATTAATCTTCTTAATAAATTAA TTGCACAACCAGAGCAGCCATTTTATATATATACTACTCCGCCTAAGAAGGTGATCAAAGACATGTCTCAAGATTTCTAT AGTGCTGGATTTTGTCCTGGTGCTATTGTGTACTTTTCATATGATGTTCCAAAAGGTGATAGTACTTTGGATCGCCAAGT TTTCCCGCACCTACTTGAAGAGGTCATGTCCTTGAAGGGTTTGGAAGTAGCAAATGATCAAGGCAAGCCGTCAGAGCCAG TGCAGTCAGCGGTGCCGGTGCCCGCAGCAGAGGCAACACGACCTATTGCTGTGGAAGAACGTAAACCTGCTGAGAAAAAG TTTGTTAAACCAAAGTGGCTGAAAATGTGA
Protein sequence (LotjaGi2g1v0083800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGDTWFTITSKRRRVTGICSMVSIADISERFGREIRVFETMSLSPSPNAAANTEQTDDFYEFTAEDYYEMVASKMADKF MKTRKIREAEEAARRSRMTKAVIRVRFPDNQTLEATFHSSETIQSLINLLNKLIAQPEQPFYIYTTPPKKVIKDMSQDFY SAGFCPGAIVYFSYDVPKGDSTLDRQVFPHLLEEVMSLKGLEVANDQGKPSEPVQSAVPVPAAEATRPIAVEERKPAEKK FVKPKWLKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 249 | 249 | 3.4E-103 | – | |
| SUPERFAMILY | 80 | 172 | 93 | 2.15E-17 | ||
| Gene3D | 90 | 172 | 83 | 1.7E-12 | – | |
| ProSiteProfiles | 96 | 172 | 77 | 13.804 | ||
| Pfam | 99 | 158 | 60 | 9.8E-7 | ||
| CDD | 101 | 174 | 74 | 8.1771E-32 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0083800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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