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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0085100 |
| Transcript ID | LotjaGi2g1v0085100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat protein; TAIR: AT3G01750.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1; TrEMBL-Plants: tr|I1N7F8|I1N7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0085100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:24321125..24325496) extracted from Lotus japonicus Gifu genome v1.2.
GGATAAGATGTGGATTGTAGAACTAAATAAAGTAATAAACTATCACTGTCACGATGTCTTCATAGATCATAATTGATTTT ATGAAGACAATGATAATTTAGTTTTATTACAAGTTGCACGATGCCATGAGCCCTGTCTCTAAAAGTTTAAAGAAAAAGCA TTCTGCATCAGTTTAGCTTCCATAATTACTTCTACACCTTTATGAACAGTGAAATCTCTTTTGCCTCAGTTCATCCTCCT ACTTCTATGATCATTGCGGCCAACCTCTTTCTTTATTATTCATGTGCTTTGCACTCTTGTTTTACTGTTCAAGACAATAC TAATCTATGAAACTTTAGAGTTTAGTAATTCCCTTTTAGATTCTCTATCCCTTTCTCAAATTATCTTCTGCAAGTGGTCT TGTGATCACTTTTCTAATAACAAAAATCTTCTTCTCTTAGCATTTTTTTTTTCTGTAAAAGTGCCTTTACCTTTTCTGAG TTAGCTTTGTGAGATCAATTATGGCTGTTTTCTTTCTTGTACTATTTACTTGATATTATTAATTCTGATCACGCTTTTTC TTTGTTGTGATCCTCTGATCCTTATCTTATTTAATTAGTTCCAGGCCTTAATTTTCTATCAGTTTCTTGTGTTGTCTTCA TGTCTATGCTTTAATGCTTTTCTTAATTTCCCACATGTTGATATTTTGTCACCCTTTATGCTCACTCAACTAGTTGTCCA ATCTCATATTTTTCATTTAAGCTTTCTTCTTCTGAATCCATTTTTTATATTCCTCACGCTAGTCCAGCTTCTTGTTTTGG AAAATTTCTTTGTTTCCCTTTCACCTTTGCAGTATTACTACTGAGTTGATTTAGTTTGGTTTGTTCTTCTGGTGTTAAGT GTGTTTAGTAATTTAGTTGTTGTTGTTACTTGTTAACTGTTTCAAACTTGTCCAGAATGCCTCCTACAAATTTTCCTCTT CGTTGGGAGAGCACTGGGGACCAGTGGTGGTATGCATCACCTATAGATTATGCTGCTGCTAATGGCCACTATGACTTAGT TCGTGAGCTGCTCCGAATTGACAGCAATCACCTCTTCAAACTCACTTCCCTGCGCCGAATCCGGCGTCTCGAAGTTGTGT GGGATGATGAAGAGCAGTTCAACGATGTCGCCATGTTTCGCTGTCAAGTGGCAAAGAAGCTTCTTGAAGAGTGTGAATCA AAGAGAGGGAAGAATTCTCTCATCAAAGGCTATGGTGGATGGCTGATGTACACTGCTGCCTCAGCTGGGGACTTGGGATT TGTGCAAGTTCTTCTTGAGAGGAACCCTTTGTTGGTTTTTGGTGAAGGAGAGTATGGTGTTACTGATATACTTTATGCTG CTGCAAGGAGCAAGAATTGTGAGGTTTTCAGGGTGCTGTTTGATTTTGCTGTTTCACCAAGGTTTATAACCGGAAAAGAT GGGATTTTGGACGAGCATGTCGGGGACATTCCTTCTGTATACAGGTGGGAGATGACTAATAGGGCTGCTCATGCTGCTGC TAGAGGTGGGAATCTGAAGATTTTGCAGGAGCTTCTTGCCAACTTTTCTGATATTTTGGCCTATAGAGATGCTGAGGGGT CAACTGTCTTGCATGCAGCTGCAGGCAGAGGGCAGGTTGAGGTGATAGTCTGTTTCTCATTTTGTTATCTTTTATTTGAG TTATGTTTCAATTTTAGGCATAAAATGTATTGTGATCCTTCTATTCTTTACCTTCATTCTCAATTTTAGTAGGGTCGTTT TAGAATTTTCAAACATATAATGTTTTGTTTGTTGTTTGATTGTGTTGTGAATCCAAGTAAGTAAGAAGTTCTACATTGGA TAAAAAACAAATTGTTTGAGCATTATCTAAGTAAGATGACTCATAAACCAAATGGCATAAGTTTTTTTTCGGATGACTCC TTGTATCGAAGTCTTCCTGTCAAGGTTGTTGTTAGGTGGTGTGTCTACTGAACTCAGTGATGAGTGCGTAGCTCTTAGCC CAATGTGGAGATCTCCCTTCCCCTCACAATTCATTGATGAGCATTTAGTTCCTTTTAGCCCAATGTGGAGATCTCACTGC CCCTCATGAGCCAACAGATTGAACATAAATGACTTTATGATTAACTGTAAGAAAAAACACATCAAATAGAATATTTTGAA TGAAATTTAACATGGATGACTTTTGAATAGCTGTAATGGACAAACGCCTCACATAGAATATTTTCTGTTGAATATCAAAT AGTAATGGAACAAACTGAATCATAGTAATATCCTTAACAAACACTTCATATGATTCATGATTTAAATTATGGTGTTGCTT GATCCTGCATGTTGTTGATCTCCGAGGGGAAGACCTGTGTCGTTTTTGTTGTTAGTAAGATCCTTCTTTTTTTATTAAGT ATCCCAGAATGCAGTAGTTAGGTCTCAATTAGAGGAAAATGCTATCTTCTTGATTTCTTATGTCAATTGTTGTGGTATTT TGATATTATACCCTAACTCTTCTTGTCTTCCATTCAGGTAGTTAAATTTCTTATATCATCCTTTGACATGATCAATTCCA CAGATCACAAGGGCAACACTGCCTTACATGTGGCTGCTTCCAGGGGCCAACTATCTGCAGCTGAAGCTCTAGTCTCTTCA TTTTCAACACTAATATCTCTGAGAAACAATGCTGGAGAAACTTTTCTTCACAAAGCAGTGTCTGGTTTTCAGACACCTGC ATTCCAAAGACTCGACCGGCAAGTTGAGCTGTTGAGGAAGTTGCTAAGTGGGAAGCACTTTCATGTAGAGGATATAATTA ATGTCAAGAACAATGATGGAAGAACTGTACTTCACATGGCCATCATAGGAAACATTCACACTGATCTTGTGCAACTGTTG ATGACTGCTCCATTAATCAATGTGAATATCTGTGATGTTGATGGCATGACCGCGCTTGATTACCTTAAACAACGCCCAAA ATCTACATCATCGGATATACTGATTAAGAAGCTGATCTCAGCTGGGGGAATGTTTGGTTTTCAAGGCTATAATTCAAGAA AAGCCATAGCTTCACACTTGAGAATGCAAAGCATTGGCAGCAGTCCCGGGACATCATTTGGAATCTCAGACACTGAAATA TTTCTGCACACCGGCATTGAGAATGTATCAGATGTTAGTGCTGAATATAATGGAAGTGCAGCAATGAGTTCATCTTCACC AGAACACATTCCATGTGACCCTGTCTCAGCCACTAGCAAAAGGCCAAGTTCTGTGAATTATGCAGCAGCAAAGTTGAAAA GGGTCCTTCTGTGGCCTAGAGTGAAGGACAAGAAAGCTGTTGACGAGGGTTCAGTGAATAACATCTATGATGAAACTCCA GCCCCACTTAGACAAAGATTTTCTAGGCCATCTTCAATTCCTAACAACAAAAGAACTCTCTCTGTCAGAAGTCACCAGTC AAGTCCAAATGCCAAGAAGAGATTTGCTTCACTAGTGCATGGAGTTATGCAATCCTTGCCACAAGCTAAGGTTTCTGTTT CGGGCCGATCTAGGTCTAGTTCCTTTTCGAAGTCATCAATTTCTTCACCTAGTTCAATAGATAAGCAAAAGGGTATTTGT ATTGACAATGACTTAGCCGGGCCATCTTGCTCAAGTGAACTACCTGAGGATGAATCACCACATTTGGGAAAGAGAACTTC TTTTAGTAAGAAGTTGAGGGGACATTATTTATGTTTTGGTGCACCTGGCCTTAATGTCAAAAGTTCAGTTCACAAGGCTA ATGTTGTTGCAGTGGCTTAATTGGATGGGTTTAGCTAGTTTTTGATAAATAAGAAACTACACTGCTAATTAAGAGTTGCT ATGGGGTTCCTAAGTCTTAAGTTTATAGATTTTACTTTGTTACTTGAGGTTAGCTCATCCTCAGGTTCACTTGTCAGCAG AAAAGCTACTATGTTAAAATATGTTTCTTATCTTATTTGGCATCCAATAAGCGTATTTTAGTTCCTAATGATGTGAGAGT TGGCATTGTCAGTGCACTCATTAGACCTTTATGCTAATGCAGTCATTCATAGTTTCTTAGATGAGCGGGTGACTACTGAT CAAATAATCATGGGGATGAATGAAACTCGTTGAGACATTAGACACATAACATAACCCCATTAGAGTGGGAAAACAAGGAC AGAAAACAAAAACAAGACTCTTCATGCCCGGGTGCTACAATCTTAAGAACAAGAGTATTGCTAGTTGAAGCAGGAGTTAA TTAATTGGTTACTGTAACACCAAATTTCAAAAGGAGGAGAACCAATCAAGTAGAGATAGTAGCAAAGTTTAAAAGCCAAA AGATAAATATAGCAAGAAAAACAAATGTGGATTCTACGGTGAAAGAGGACAA
CDS sequence (LotjaGi2g1v0085100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTCCTACAAATTTTCCTCTTCGTTGGGAGAGCACTGGGGACCAGTGGTGGTATGCATCACCTATAGATTATGCTGC TGCTAATGGCCACTATGACTTAGTTCGTGAGCTGCTCCGAATTGACAGCAATCACCTCTTCAAACTCACTTCCCTGCGCC GAATCCGGCGTCTCGAAGTTGTGTGGGATGATGAAGAGCAGTTCAACGATGTCGCCATGTTTCGCTGTCAAGTGGCAAAG AAGCTTCTTGAAGAGTGTGAATCAAAGAGAGGGAAGAATTCTCTCATCAAAGGCTATGGTGGATGGCTGATGTACACTGC TGCCTCAGCTGGGGACTTGGGATTTGTGCAAGTTCTTCTTGAGAGGAACCCTTTGTTGGTTTTTGGTGAAGGAGAGTATG GTGTTACTGATATACTTTATGCTGCTGCAAGGAGCAAGAATTGTGAGGTTTTCAGGGTGCTGTTTGATTTTGCTGTTTCA CCAAGGTTTATAACCGGAAAAGATGGGATTTTGGACGAGCATGTCGGGGACATTCCTTCTGTATACAGGTGGGAGATGAC TAATAGGGCTGCTCATGCTGCTGCTAGAGGTGGGAATCTGAAGATTTTGCAGGAGCTTCTTGCCAACTTTTCTGATATTT TGGCCTATAGAGATGCTGAGGGGTCAACTGTCTTGCATGCAGCTGCAGGCAGAGGGCAGGTTGAGGTAGTTAAATTTCTT ATATCATCCTTTGACATGATCAATTCCACAGATCACAAGGGCAACACTGCCTTACATGTGGCTGCTTCCAGGGGCCAACT ATCTGCAGCTGAAGCTCTAGTCTCTTCATTTTCAACACTAATATCTCTGAGAAACAATGCTGGAGAAACTTTTCTTCACA AAGCAGTGTCTGGTTTTCAGACACCTGCATTCCAAAGACTCGACCGGCAAGTTGAGCTGTTGAGGAAGTTGCTAAGTGGG AAGCACTTTCATGTAGAGGATATAATTAATGTCAAGAACAATGATGGAAGAACTGTACTTCACATGGCCATCATAGGAAA CATTCACACTGATCTTGTGCAACTGTTGATGACTGCTCCATTAATCAATGTGAATATCTGTGATGTTGATGGCATGACCG CGCTTGATTACCTTAAACAACGCCCAAAATCTACATCATCGGATATACTGATTAAGAAGCTGATCTCAGCTGGGGGAATG TTTGGTTTTCAAGGCTATAATTCAAGAAAAGCCATAGCTTCACACTTGAGAATGCAAAGCATTGGCAGCAGTCCCGGGAC ATCATTTGGAATCTCAGACACTGAAATATTTCTGCACACCGGCATTGAGAATGTATCAGATGTTAGTGCTGAATATAATG GAAGTGCAGCAATGAGTTCATCTTCACCAGAACACATTCCATGTGACCCTGTCTCAGCCACTAGCAAAAGGCCAAGTTCT GTGAATTATGCAGCAGCAAAGTTGAAAAGGGTCCTTCTGTGGCCTAGAGTGAAGGACAAGAAAGCTGTTGACGAGGGTTC AGTGAATAACATCTATGATGAAACTCCAGCCCCACTTAGACAAAGATTTTCTAGGCCATCTTCAATTCCTAACAACAAAA GAACTCTCTCTGTCAGAAGTCACCAGTCAAGTCCAAATGCCAAGAAGAGATTTGCTTCACTAGTGCATGGAGTTATGCAA TCCTTGCCACAAGCTAAGGTTTCTGTTTCGGGCCGATCTAGGTCTAGTTCCTTTTCGAAGTCATCAATTTCTTCACCTAG TTCAATAGATAAGCAAAAGGGTATTTGTATTGACAATGACTTAGCCGGGCCATCTTGCTCAAGTGAACTACCTGAGGATG AATCACCACATTTGGGAAAGAGAACTTCTTTTAGTAAGAAGTTGAGGGGACATTATTTATGTTTTGGTGCACCTGGCCTT AATGTCAAAAGTTCAGTTCACAAGGCTAATGTTGTTGCAGTGGCTTAA
Protein sequence (LotjaGi2g1v0085100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPTNFPLRWESTGDQWWYASPIDYAAANGHYDLVRELLRIDSNHLFKLTSLRRIRRLEVVWDDEEQFNDVAMFRCQVAK KLLEECESKRGKNSLIKGYGGWLMYTAASAGDLGFVQVLLERNPLLVFGEGEYGVTDILYAAARSKNCEVFRVLFDFAVS PRFITGKDGILDEHVGDIPSVYRWEMTNRAAHAAARGGNLKILQELLANFSDILAYRDAEGSTVLHAAAGRGQVEVVKFL ISSFDMINSTDHKGNTALHVAASRGQLSAAEALVSSFSTLISLRNNAGETFLHKAVSGFQTPAFQRLDRQVELLRKLLSG KHFHVEDIINVKNNDGRTVLHMAIIGNIHTDLVQLLMTAPLINVNICDVDGMTALDYLKQRPKSTSSDILIKKLISAGGM FGFQGYNSRKAIASHLRMQSIGSSPGTSFGISDTEIFLHTGIENVSDVSAEYNGSAAMSSSSPEHIPCDPVSATSKRPSS VNYAAAKLKRVLLWPRVKDKKAVDEGSVNNIYDETPAPLRQRFSRPSSIPNNKRTLSVRSHQSSPNAKKRFASLVHGVMQ SLPQAKVSVSGRSRSSSFSKSSISSPSSIDKQKGICIDNDLAGPSCSSELPEDESPHLGKRTSFSKKLRGHYLCFGAPGL NVKSSVHKANVVAVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 650 | 650 | 6.8E-210 | – | |
| PANTHER | 1 | 650 | 650 | 6.8E-210 | – | |
| Gene3D | 13 | 169 | 157 | 2.3E-8 | ||
| SMART | 18 | 47 | 30 | 12.0 | ||
| SUPERFAMILY | 96 | 377 | 282 | 4.6E-37 | ||
| SMART | 99 | 128 | 30 | 2000.0 | ||
| SMART | 133 | 163 | 31 | 1000.0 | ||
| Gene3D | 182 | 415 | 234 | 1.9E-36 | ||
| ProSiteProfiles | 186 | 398 | 213 | 25.514 | ||
| SMART | 186 | 215 | 30 | 160.0 | ||
| Pfam | 188 | 241 | 54 | 2.1E-8 | – | |
| SMART | 220 | 249 | 30 | 0.035 | ||
| ProSiteProfiles | 220 | 252 | 33 | 10.873 | ||
| SMART | 253 | 283 | 31 | 0.72 | ||
| ProSiteProfiles | 253 | 275 | 23 | 8.843 | ||
| SMART | 287 | 327 | 41 | 3200.0 | ||
| Pfam | 329 | 377 | 49 | 1.8E-6 | – | |
| SMART | 335 | 366 | 32 | 0.072 | ||
| MobiDBLite | 510 | 547 | 38 | - | – | |
| MobiDBLite | 521 | 547 | 27 | - | – | |
| MobiDBLite | 565 | 591 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0085100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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