Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF13857

Source: Pfam

Description

Ankyrin repeats (many copies)

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 20

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1798860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat domain-containing protein [Medicago truncatula] gi\|357465949\|ref\|XP_003603259.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.20 IPR002110 IPR020683 IPR026961 NON_CYTOPLASMIC_DOMAIN PF12796 PF13857 PF13962 PS50088 PS50297 PTHR24128 PTHR24128:SF24 SM00248 SSF48403 TMhelix TRANSMEMBRANE cd00204	18
Lj2g3v2002310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X3 [Cicer arietinum] gi\|502114219\|ref\|XP_004494898.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.20 IPR002110 IPR020683 IPR026961 NON_CYTOPLASMIC_DOMAIN PF12796 PF13857 PF13962 PS50088 PS50297 PTHR24186 PTHR24186:SF8 SM00248 SSF48403 TMhelix TRANSMEMBRANE cd00204 mobidb-lite	19
Lj2g3v2794550.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ankyrin-2-like [Cicer arietinum] gi\|502097529\|ref\|XP_004491016.1\|	Domains G3DSA:1.25.40.20 G3DSA:2.60.40.360 IPR000535 IPR002110 IPR008962 IPR020683 PF00635 PF13857 PR01415 PS50088 PS50202 PS50297 PTHR24198 PTHR24198:SF33 SM00248 SSF48403 SSF49354 cd00204	18
Lj3g3v1581460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	XB3 in [Theobroma cacao] gi\|508786803\|gb\|EOY34059.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 PF00023 PF12796 PF13857 PS50088 PS50089 PS50297 PTHR24128 PTHR24128:SF14 SM00248 SSF48403 SSF57850 cd00162 cd00204	19
Lj3g3v3189740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	XB3 in [Theobroma cacao] gi\|508786803\|gb\|EOY34059.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 PF00023 PF12796 PF13857 PS50088 PS50089 PS50297 PTHR24128 PTHR24128:SF14 SM00248 SSF48403 SSF57850 cd00162 cd00204	19
Lj3g3v3553970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cicer arietinum] gi\|502144378\|ref\|XP_004505675.1\|	Domains G3DSA:1.25.40.20 G3DSA:2.40.50.40 IPR000953 IPR002110 IPR016197 IPR020683 IPR023780 IPR030300 PF00385 PF13857 PS50013 PS50088 PS50297 PTHR24128 PTHR24128:SF11 SM00248 SM00298 SSF48403 SSF54160 cd00024 cd00204 mobidb-lite	22
Lj3g3v3553980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Glycine max] gi\|356538524\|ref\|XP_003537753.1\|	Domains G3DSA:1.25.40.20 G3DSA:2.40.50.40 IPR000953 IPR002110 IPR016197 IPR020683 IPR023780 IPR030300 PF00385 PF13857 PS50013 PS50088 PS50297 PTHR24128 PTHR24128:SF11 SM00298 SSF48403 SSF54160 cd00024 cd00204 mobidb-lite	21
Lj5g3v1201220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable methyltransferase PMT8-like [Glycine max] gi\|356576523\|ref\|XP_003556380.1\|	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 PF13857 PF13920 PS50088 PS50089 PS50297 PTHR24188 PTHR24188:SF44 SM00184 SM00248 SSF48403 SSF57850 cd00162 cd00204	19
Lj6g3v0959380.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein TANC1-like [Cicer arietinum] gi\|502166647\|ref\|XP_004513946.1\|	Domains G3DSA:1.25.40.20 IPR002110 IPR020683 PF13637 PF13857 PR01415 PS50088 PS50297 PTHR24193 PTHR24193:SF83 SM00248 SSF48403 cd00204	13
LotjaGi1g1v0074700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat-containing protein, putative; TAIR: AT2G03430.1 Ankyrin repeat family protein; Swiss-Prot: sp\|Q08DV6\|ASB3_BOVIN Ankyrin repeat and SOCS box protein 3; TrEMBL-Plants: tr\|I1JIE8\|I1JIE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0074700	Domains G3DSA:1.25.40.20 G3DSA:2.60.40.10 IPR000535 IPR002110 IPR008962 IPR013783 IPR020683 IPR036770 PF00635 PF13857 PR01415 PS50088 PS50202 PS50297 PTHR24184 PTHR24184:SF12 SM00248 SSF48403 SSF49354	19
LotjaGi1g1v0374700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat-containing protein family; TAIR: AT4G10720.1 Ankyrin repeat family protein; Swiss-Prot: sp\|Q8GYH5\|BAD1_ARATH Ankyrin repeat-containing protein BDA1; TrEMBL-Plants: tr\|I1JU42\|I1JU42_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0374700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.20 IPR002110 IPR020683 IPR026961 IPR036770 NON_CYTOPLASMIC_DOMAIN PF12796 PF13857 PF13962 PS50088 PS50297 PTHR24128 PTHR24128:SF42 SM00248 SSF48403 TMhelix TRANSMEMBRANE	18
LotjaGi1g1v0528600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ADP-ribosylation factor GTPase-activating protein; TAIR: AT5G13300.1 ARF GTPase-activating protein; Swiss-Prot: sp\|Q5W7F2\|AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3; TrEMBL-Plants: tr\|A0A151TCR5\|A0A151TCR5_CAJCA ADP-ribosylation factor GTPase-activating protein AGD3; Found in the gene: LotjaGi1g1v0528600	Domains Coil G3DSA:1.20.1270.60 G3DSA:1.25.40.20 G3DSA:3.30.40.160 IPR001164 IPR001849 IPR002110 IPR004148 IPR020683 IPR027267 IPR035670 IPR036770 IPR037278 IPR038508 PF00169 PF01412 PF13857 PF16746 PR00405 PS50003 PS50088 PS50115 PS50297 PTHR23180 PTHR23180:SF405 SM00105 SM00233 SM00248 SM00721 SSF103657 SSF48403 SSF50729 SSF57863 cd07606 cd08204 cd13250 mobidb-lite	37
LotjaGi2g1v0085100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat protein; TAIR: AT3G01750.1 Ankyrin repeat family protein; Swiss-Prot: sp\|Q6GNY1\|MIB1_XENLA E3 ubiquitin-protein ligase mib1; TrEMBL-Plants: tr\|I1N7F8\|I1N7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0085100	Domains G3DSA:1.25.40.20 IPR002110 IPR020683 IPR036770 PF13637 PF13857 PS50088 PS50297 PTHR24203 PTHR24203:SF41 SM00248 SSF48403 mobidb-lite	13
LotjaGi2g1v0372500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp\|Q94B55\|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr\|I1LK31\|I1LK31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372500	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 IPR036770 PF12796 PF13637 PF13857 PS50088 PS50089 PS50297 PTHR24128 PTHR24128:SF47 SM00248 SSF48403 SSF57850	18
LotjaGi2g1v0372500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp\|Q94B55\|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr\|I1LK31\|I1LK31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0372500	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 IPR036770 PF00023 PF12796 PF13857 PS50088 PS50089 PS50297 PTHR24128 PTHR24128:SF47 SM00248 SSF48403 SSF57850	18
LotjaGi2g1v0425700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat-containing protein; TAIR: AT2G31820.1 Ankyrin repeat family protein; Swiss-Prot: sp\|Q6AWW5\|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr\|A0A0S3RIE5\|A0A0S3RIE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.20 IPR002110 IPR020683 IPR026961 IPR036770 NON_CYTOPLASMIC_DOMAIN PF12796 PF13857 PF13962 PS50088 PS50297 PTHR24186 PTHR24186:SF8 SM00248 SSF48403 TMhelix TRANSMEMBRANE	18
LotjaGi2g1v0425700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat-containing protein; TAIR: AT2G31820.1 Ankyrin repeat family protein; Swiss-Prot: sp\|Q6AWW5\|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr\|A0A0S3RIE5\|A0A0S3RIE5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0425700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.25.40.20 IPR002110 IPR020683 IPR026961 IPR036770 NON_CYTOPLASMIC_DOMAIN PF12796 PF13857 PF13962 PS50088 PS50297 PTHR24186 PTHR24186:SF8 SM00248 SSF48403 TMhelix TRANSMEMBRANE	18
LotjaGi3g1v0282800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein; TAIR: AT2G28840.1 hypothetical protein; Swiss-Prot: sp\|Q94B55\|XB31_ARATH Putative E3 ubiquitin-protein ligase XBAT31; TrEMBL-Plants: tr\|A0A0L9UNF0\|A0A0L9UNF0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0282800	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 IPR036770 PF12796 PF13857 PS50088 PS50089 PS50297 PTHR24128 PTHR24128:SF47 SM00248 SSF48403 SSF57850	17
LotjaGi5g1v0190600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat domain protein, putative; TAIR: AT3G23280.2 hypothetical protein; Swiss-Prot: sp\|Q4FE47\|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35; TrEMBL-Plants: tr\|A0A072VLQ0\|A0A072VLQ0_MEDTR E3 ubiquitin-protein ligase XBAT35, putative; Found in the gene: LotjaGi5g1v0190600	Domains G3DSA:1.25.40.20 G3DSA:3.30.40.10 IPR001841 IPR002110 IPR013083 IPR020683 IPR036770 PF13857 PF13920 PS50088 PS50089 PS50297 PTHR24180 PTHR24180:SF18 SM00184 SM00248 SSF48403 SSF57850	18
LotjaGi6g1v0180700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ankyrin repeat family protein; TAIR: AT5G12320.1 ankyrin repeat family protein; Swiss-Prot: sp\|Q6F6B3\|TANC1_RAT Protein TANC1; TrEMBL-Plants: tr\|I3SL28\|I3SL28_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0180700	Domains G3DSA:1.25.40.20 IPR002110 IPR020683 IPR036770 PF13637 PF13857 PR01415 PS50088 PS50297 PTHR24134 SM00248 SSF48403	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF48403	SUPERFAMILY	1	5.00