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LotjaGi2g1v0086200.1

Overview

Field Value
Gene ID LotjaGi2g1v0086200
Transcript ID LotjaGi2g1v0086200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT5G14260.1 Rubisco methyltransferase family protein; Swiss-Prot: sp|Q9XI84|RBCMT_ARATH [Fructose]-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic; TrEMBL-Plants: tr|G7KNL1|G7KNL1_MEDTR Rubisco methyltransferase family protein; Found in the gene: LotjaGi2g1v0086200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:24885601..24893994) extracted from Lotus japonicus Gifu genome v1.2.

GTTTTTCTTTATTTGTTCGTCATCTACCAAAAAATTTGATAACTCTTGTAAATGGTGGAATGAATTCGGGATTCACGACG AATAATAGACCAATACACAACACCTAGATTTTTGTTTCCCTCCATCACAAATTCACAATCTAGCCAAACTAATTTCTCTT TCTCTCTCTCTCACCTTCTTATCCTTCAGCTAACGTACAAACAAAACAAGTCTCCAAAATCTCAAACCAAAATATCCTCT TTCGTGCTAAAATCAACACACTCCCTCCCTCTTACTCCTCTTTCCTTCTTTCTTTCTTTCTTGCTCAGAAGCTGAAATTC AATTCAAAACGCTGCGTTTTTCCCAGTGTCTAAACATTTCTCAATTTCCACAAACCCTAACCCTATGGAAGTTTCACCTG TCTCAGTTTCAGACAAGTGCTTCTTCTTCTCCCCTCCAATTCGCCATTCTTCTTCCGCTTACCCTCTCCCCTCGTGCAAC AACTACCACCGCTTCCGCCGCCGCCGCTGGAGTTACTGTTGCGCCTCCAACCCCGACACCCTGCTCGCCGGCGGTAATGC CGTCGTTACCGCCGCTTCCGGCAGGAAGCGCGAGGTGGAGCACGACGACGACGACTTGAAATCTTGGATGCACAAGCATG GCCTCCCTCCGTGCAAGGTTGTTCTGAAAGATAAGCCTTCCCACGATGATACCCTTAAGCCTATACATTATGTTGCTGCC AGTGAAGATCTTCAGGTTTTTTTCTTTCGTAATTCATCGGTTTTGTGATTCTTATTTTCATTTTGGTGTTCTTGTTATTG ATATGCTATGTCTTCTTTGGGTTGTGTTTCTTGCAGGTGGGCGATGTTGCAATCTCCGTTCCAAATTCGCTGGTTGTCAC TCTAGACCGTGTCTTGGGAAATGAGACTGTTGGTAATTATGCAATGCTTCTGATTCTTTGGTTATGTCCTGTTCTTCTTT GCAACTGAATTATAGTAGAATGCAAATTGCATTGTTCCCGTTCCCCCTGTTAGCAGGTATGATAGGAAATTAGGAATTGA AATAGCTTGTAAACACAAACCCATTTCATCCTTAATTTGGTCCATATATTTCTTTTTTAAATATGAGCCCTGTATGTATA ATGACACATGGATTCACATAAAGTTAATGTAAAGTGCAAGGGCCAAACTGAAAAATGGTTATCATGTTTAAGAGCAAAAA CAGTATTTAAAGTCTTTATTTGTGACAATACTTTTTAATTTGGTTTATAAACTTTGCTGTGTTATCGTTCCAAGTCTCCA AAAGTTGGTGTTAAAACTTAAAACAATAACAGTTTGTGAGAACCAAATGAAGAATGATTATATATATAAGAATTGGCTTA TAGGAAAAACTTATCATTTAGCTATAAGGAACTAACAAGCGATGAAGCTCACTGTTGTAAGGATGAGAAAATTGGGATAG CTCCCGTTGCATCTTGTTTTAGGTGATTTGAGCATGTCGAGAATACTTATAGAACACCATTAAGGAAGATATAGACCAAA TGGAGGATAGTCCTATAGTTAGAGGAAGAGGGAGATCAAAGAAAACTTGGTCTAAACCATTAATAGAGATTTAGATGTAA ATGGTTTTTAATGGGATTTGATTCATGAAAGGACATTATGGCATCATTTAATCCATGTAGCTGACTCGACCTGGGAAGAA AAGACTTTGTTGTAATGTATATTTAAGGACTAAATTGAAAACTTATTTCTTATAGGGACTAATAGTAAATGAGCGTCACA TAGAGGCACTGAGAATATATTTTATTTTAAGCTCTTTTCCTTGTTAGTTGTTTAGTTATGTGCATTAAATAATAGGTCAT AAATGCATTTTTAGTGTTTCATGGCTGATTTGATTTGAACTTTTCTGATAAGATGGCATATTGATCCAAATTCTTGAATT ATTTTATTTAGATGATTGATGTTTTGACGGAGGTATGTGATAAAGCAATAGCAGTAATCACTAAGGTATATCAGTTAGAG AGTTGTCAGAATCTGTTCTAACTTCTAACCAATTAGAAGTTAGAGGTCAGTTAGTTTGCCTAGAATAGATAGTTGAAGGA AACAATAGGAGGAGGCTATAACTTGAATTGAGTGGAAAATGAGGAGCTTCTGGGTTTCTCTCAAATATTCTGCCTATTTC GGAAATTCCTATATTCTTGAGGTTATCTCAGGTAATCTCTATTAAAGCAATTAAAGAAGTTCTTTCTCTGTTTTCTGATA CCAGTTCTATCAGTATGTCATATTCCTCTGGTTAGTCATGTTTAGTGTCAGAAATGGATTAGAAATTGTATGGAAGAGGT TCAGTGTTTGGGGTGACAAAACATGCTTATTCTAGAAAAGAATCTCAGAATTCATTTATAGGACAATGAAAAGTGTGATT TTCGTCCATGCTTCTACTCAGTGAATTGATTTGTGTCTGTGTTGTTCAGGTGTAATAAATGTTAGATCAGTGGATTGGAA GTGTATTATTGCATTTTAACTTTTGAATTTATATCTCATGCTTTATCCTTATTGCAGCTGAGCTACTGACCACAAACAAA TTTTCCGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAAAACAGGGGAAGAAGTCTTTCTGGTATCCATACAT TAGGGAGCTTGATCGTCAACGAGGTAGGGGCCAGATGGCAGTGGAATCGCCTCTTCTATGGTCAGAATCTGAGCTGGCTT ACCTTGCAGGAAGTCCATTAAAGGTTTCCACTTCTCTGCCCCTCCCCCCCTCTTTTCTTTCTCTTATTAATGATGAATAC AAAATCCAGTGTACTGATAAGTGATGATATTAAGTTCTTTTAATGCTTGATATTTTTCACATATATCCGGACTAAATTCT GGTGGTTGTGATTTAGGATGAAATTCTTAAAAGGATTGAAGGAATAAAAAAAGAGTATGATGAACTTGACACAGTCTGGT TTATGTCTGGTTCTCTTTTTCAGGTAATTTACTGGTACTAGAACAAGTACAATTATTATTTACATTGTCACTTGTTCTTA CATTATATCATAATGCAGCAATATCCATATGACATTCCTACCGAGGCTTTTCCATTTGAGATTTTCAAACAAGCCTTTGC TGCTATTCAGTCTTGTGTGGTGCATTTACAGGTAAAGTTGCCTTCTTATCTAGTATATATTTGTACAGCTAGTAAATTAT GTGCAAGATCCTCTGAACTTTTTAGTACCTTACCAGTCTCTTCAGTTAATCTTGGTCTATTTTAATGAGCATCTCATATT TGACCCTGAAATTACCTGAATGCAATGCCAATCTTCCATGCTGCAATTATATATCAGGCCACAGAGCTTTATATACAAGT TTATTCAATCTACTAATTTGTTAACATATTTTAACTTTTAATTGATTCTTTGATGGAACCCTGATATTATTCAACTGAGA AATGTACAAGAAACAGATGAGTATTCGAGAGACTCATCACTCTCCTAAATCCCAATTCCCAAATGATCCCAAAGATCCCT AAATCCTCTTCACACTCCCTTTTTTCTAGGCTAACCCTTAACTAACTAACTAACTAACTCTATAGGCTACCCTTAACTGA CTAACTAACTCTAAGTACCCATCATTCTTGGATTTGTTAAATTATGTGAATTTGTGACAATGAATTTAAAATTTAAAATT GATATTTTTGTTGTGACTACTGACTACAGAATGTAAATATTTTTCAGCAAACATGGATATTATTAATGCTCTTGTTTCTT ACTTTTGCATCATGTACTAATTTCCTTGTAATCTTTGGTTACTTTCCACGATTGATCTGTTTAAGATTCATGCTAGACTT CTCATTGATTGATGTAGTTTTCTGTTAATGGCGTTTAATATGCCTGCTGGGAGGGAGCTAAGTGCTGCTCTTCTGTCTGA CAACCGCAGTTGCTAATCTTGTCTATCTATCTATCTATCTGTTTTCAACAATGGGTGCAAATTGATTGCTTGTCTTTTTG ACATCAGAAAGTTAGTTTAGCTCGGAGATTTGCTTTGGTTCCACTGGGACCTCCTTTGCTGACCTACCGAAGCAACTGCA AGGCAATGTTAACTGCTGTTGAGGGTGCTGTTGAGCTTGTGGTTGATCGCCCATACAAAGCTGGGGACCCAATAGTCGTC TGGTATAAATATAATACATGCTTAACTGGACAATGCATAATTTGGATAATGTACTTATTTCTGTAGTAGTTGCTTCATTA TAAAATTTATAGTTTGTCATTTTCAGGTGTGGCCCACAGCCTAACACAAAGTTACTTACAAACTACGGTTTTGTTGATGA AGAAAATCCCTACGATCGTCTAGTAGTTGAGGTATAGTTGGTCATTTACTTTGTCCGTATTCACTCTTGTTTCAATTAAA ATTTAACCCTGCTTATACATGTGTCTCAGGCAGCTTTGAATACTGAAGATCCACAATATCAAGATAAAAGAATGGTTGCT CAAAGAAATAAGAAGTTATCAATTCAAGTTTTTTATGTATTCATACTGAACTCTTAATTTCGTTTAAGTTATTTGGTGAT TTTTCTTGTCAATTCCATAGTTTAACCCAACCTCGGTGCAGGTTTATGCTGGAAAGGAAAGGGAAGCTGTTTCAGATATG CTTCCTTATCTCCGTCTAGGCTATGTTTCAGATCCTTCTGAGATGCCATCTGTTATCTCTTCTCAAGGTCCTGTTTGTGC TGTAAGTTTGTCTATTCTTGTGTTTTCCTTTTCTGAATTTGAGGAATTTTAAGAATGCTAAAGATCAAAAATCCAGTATC TGTCCTCTTGAATCTTGACTTTAATTATCCTTATAGGTAAGCCCTTGTATGGAGCGCGCTGTATTAAACCAGCTGGCTAA TTATTTCAAGAGTCGGCTGGCTGGTTACCCTACTACCTTGGCTGAAGATGAATCTATGGTACTGTTTGTTCGAATTAGAA GTTGACCAAGACTTGTTAACTTTTCATTGATAATTTATTTATTGCATTAGCTGACAGATGATAGTCTGAATCCAAAGAAA CGAGTAGCTACTCAGCTTGTTAGGCTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACAGCTGATTTCATAAACCA GCTTCCTGACCACAGTGTATCTCCATGCCCTGCTGCATATGCACCTTTATTAAAATGAAAGGTCCAACTCTCTCTGCTTT GAAATATGTCCATCATGTACTTATTGAATTGGAAATTTTTGCAGTAATTCATGATTTTTTTGTCTTATACTTCGTAGGAA CTGGGTTGTCTGTGCTATACATTATGTGGATTGAACGAACAAGGTAAGTTGAATTACATTTCTTCATAGCATTGAATATT TTAGCGTTCTATTTGATATCATGTATAAGGAAGGGAAAGGTAATCTGGTGATACAAATCCCATGAATTAGGGTAATATGT AATATGATAATATATTTGAAATAAGTAGTTGAAAAAGAGGTAACCTTGCATAATTTTTTAATAATGACTGAGTTAGCTTT CAAGGCTTAAACATATCTCCAAATAATGCGAAATGCGAAAAAAATGATAGGTAGGCAACAGTGAAAAATAAACCAGAAGA GAAAAATCATGGGGAGGATGTTGATCATGAATGCAACATAGGTGTAGTTAAAAGTTTGTGTAAATGATTATGCTCTGTTG ATTCTTTGTTATGTAACCAGTTTCAGAGTAGTCTGATTGCATGGGTAGATGCTGATGCATTAGGATTCGTGTTCTTTCTA TAATAGTGGACAAATAATACCCTAGCATCTAAAAGAAATAACAGGGCATGGAGTTTGATTGTGAAGGCCTTTATGCATAA GTGTTTCAGATTTCTATGAGTGATCTTATAGGTCCATGAGATTTCCATACATATTTGAATATAGTTCACGAGTTGCTGAT ATCTACTCTTTCATGATTGATGTTTCTAGAAAATTAATGGAAGAGTTCCAGAATCCAGACAAAAAGGGTTAGTTCGTCCT TTATGTATCTCCTGAAGATATGAACTACAAAAGAGTCTTTTCTGTGTCCCTTTTCATTAGTTGAGTTTTTTTTGGGGGTC TGTGGCGGCATAGATGACTGTAAAATTGGGTGTTTGAACGATAGCCATAATTGTAAATGGAAATCTGGATACAGATTCTA ATTCATTTGTGTATATAGGCATAACTTTTGTATGGCAAGCCAACTGTTTGCAGTTCACGTGGAAAATAGTAGTAAAAATG TCAAATGCAAGATTTTCTCTTTTTTGTTTACCGAAGATGTTAGTTACGAATTTCAAATGACATAAGCAACTAAATGACGG AGACATTAGTTCTTGTTTGTCTTAATCTTTAGGTTAAGGGTAATGGATTAAGATCCTCTCATAGTAAAGCATTGTGTCTA TTTTTCTCTTCAAGATGGTCCCACCTATTTAATATATAAAGTGTATGGGGTGTGCACGGTTTGGTTAATTAGAGAACTAA TCTAATTAGTATTCTATTAAACCGGTTTTAAACCAATTTTAAGAATTGGATATGGTTTTGAAGAATTGGATATAGTTTTG GTAGCATTATAGATTTTATCACCACCCTAATCTGTCGCACTTATGTTTGTGGAAATCAACTATACAACGTATGTAAGATT GCGGAATACAAGTGATACATTCTATGATGGAAAATGCAAAAAAGTGGATGTTGTGAGAATGTAATTGGGTGGTACCAAAA TTAGTGCTCTAGATGAAATAGACACTTCAAGCAGATTCAATACCTTTTTGGGAACCTTGCCTCTTGTGATTAGTGATTCA ATCTCACTTTTCATGTATTGGGATGGTATGAGAATATAAAGGGGTGGTACCAAAACTAATGCTCTAGATAAAATAATAGA CGTTTTATGCTGATTCAATACACTTTCGGGAACCTTACCTCTTGCCATAATCTCACATTTCATGTCTTGGTATTAATTAC TGACACATGCATAATAGGAAAATCAAAGAAAGAGAAAGAGAAAAAATTTGCATCTGAAAATATTCACTATGAATTGTTAA TCGATACAATGAGTATTGAATCCTTATATAGGATTGAAGAAGCTTGCTCTATAAGCTAAACTAACAGCTAAGCTAACTCT AACTTAATGGTAACAACATCTAACAGAATTGACAGCTGTTCAAAACAGAATTAACAACTGTGTCCAGCTGGCACACACAA ACTAAGCATAACCGATATTTTCATATCACTTATATACCTATATACTCTAATACACCCCCTCAAACTGAAGGAGGTGAAAA AAGCTAAAGCTTGTCAACTACATTCAGTTTGTCCTTGAGCTGTAGAAACCTTGTTGGGGAGAGAGCTTTGGTGAAGATGT CAGCTTTTTGATGTTCAGAGGGCACATGCTGAACAAGAAGACTCTTGTCTTGAACTTTCTCTCTTACAAAGAATATATCC ATTTCCATATGCTTAGTTCTGGTGTGTAAAATAGGATTGTGAGTCAACAACACTGTGCTCATGTTATCACAATAAACTGT AGGAGTAGTGATGACCCGAGGTTTATTCTATGATTGTCGAGTCCTTCTTGTTTCTTTCTTCTTCCTTTTTGAGTCTTTTA TTGAGTTTTAAGTCAAGTTAAGTCCCTTTTTAATTCATATTTGCATCTGAGTAGTTTAGGTGTTTTTAATTTGTTTAGAT GATCTTTTAATTAGTTTTTATTGAGGTTTAAGTCCTAAGGTCAGGTTTGATTTAGAGTCTTGAGAGAATATGAGAGTTGA TTGCATATTAGAAGTTTTATTTGATGAATTGAATGAAAGATTTCTGAATTATTGTGATTAAATGAGTGTTTCCATGAGTT ACATTGAGGAAATGATGGTTTTTGAGATTCTTTGGAGGTTTCAGGTGATTTTGATGGCCAATGATGATGGTTGAAGGCAA AGTAATGAGCCATGATGATAGTTGAAGAAGGAGTTACAAAATTGAAGAAAAATCAGATGAGCCACGCATGTGCGCCATGT ATCCCACGCACATGCGTGGAGCTACTGCAGGAAAAACCTGATGCCCACTCATGTGCGTCGTCTGATCCACGCACATGCGT GGTGGCAAAATCTGATGCTTCGAATTTTGCGTTTTGAGCGTTTTGCCCACGCATGTGCGTGGAGGAGGCCACGCACATGC GTGGATTACTGCTGGAAACTCTATAAATAGGGATTTTGTTATTTCTTTTAGGGATCTTGTAACTTTTTGAACAAAACTTA GAGGTTTAGGTTCTTGGAGCTTGTGGGAGGCTTCTTGGCCCTCTTCTTTCAGGTTTTTATTCCTTTAGTTTGCATTATGA ATTCCCTAGCCATGCTTGGCTAATTTCTCTTTTGTATTTTGGGTGAAGTGAACCTTAGTTCTGATTATGGTTTA 

CDS sequence (LotjaGi2g1v0086200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGTTTCACCTGTCTCAGTTTCAGACAAGTGCTTCTTCTTCTCCCCTCCAATTCGCCATTCTTCTTCCGCTTACCC TCTCCCCTCGTGCAACAACTACCACCGCTTCCGCCGCCGCCGCTGGAGTTACTGTTGCGCCTCCAACCCCGACACCCTGC TCGCCGGCGGTAATGCCGTCGTTACCGCCGCTTCCGGCAGGAAGCGCGAGGTGGAGCACGACGACGACGACTTGAAATCT TGGATGCACAAGCATGGCCTCCCTCCGTGCAAGGTTGTTCTGAAAGATAAGCCTTCCCACGATGATACCCTTAAGCCTAT ACATTATGTTGCTGCCAGTGAAGATCTTCAGGTGGGCGATGTTGCAATCTCCGTTCCAAATTCGCTGGTTGTCACTCTAG ACCGTGTCTTGGGAAATGAGACTGTTGCTGAGCTACTGACCACAAACAAATTTTCCGAATTGGCATGCTTGGCATTGTAT CTGATGTATGAGAAAAAACAGGGGAAGAAGTCTTTCTGGTATCCATACATTAGGGAGCTTGATCGTCAACGAGGTAGGGG CCAGATGGCAGTGGAATCGCCTCTTCTATGGTCAGAATCTGAGCTGGCTTACCTTGCAGGAAGTCCATTAAAGGATGAAA TTCTTAAAAGGATTGAAGGAATAAAAAAAGAGTATGATGAACTTGACACAGTCTGGTTTATGTCTGGTTCTCTTTTTCAG CAATATCCATATGACATTCCTACCGAGGCTTTTCCATTTGAGATTTTCAAACAAGCCTTTGCTGCTATTCAGTCTTGTGT GGTGCATTTACAGAAAGTTAGTTTAGCTCGGAGATTTGCTTTGGTTCCACTGGGACCTCCTTTGCTGACCTACCGAAGCA ACTGCAAGGCAATGTTAACTGCTGTTGAGGGTGCTGTTGAGCTTGTGGTTGATCGCCCATACAAAGCTGGGGACCCAATA GTCGTCTGGTGTGGCCCACAGCCTAACACAAAGTTACTTACAAACTACGGTTTTGTTGATGAAGAAAATCCCTACGATCG TCTAGTAGTTGAGGCAGCTTTGAATACTGAAGATCCACAATATCAAGATAAAAGAATGGTTGCTCAAAGAAATAAGAAGT TATCAATTCAAGTTTTTTATGTTTATGCTGGAAAGGAAAGGGAAGCTGTTTCAGATATGCTTCCTTATCTCCGTCTAGGC TATGTTTCAGATCCTTCTGAGATGCCATCTGTTATCTCTTCTCAAGGTCCTGTTTGTGCTGTAAGCCCTTGTATGGAGCG CGCTGTATTAAACCAGCTGGCTAATTATTTCAAGAGTCGGCTGGCTGGTTACCCTACTACCTTGGCTGAAGATGAATCTA TGCTGACAGATGATAGTCTGAATCCAAAGAAACGAGTAGCTACTCAGCTTGTTAGGCTGGAAAAGAAAATGCTTCATGCA TGTTTGCAGGCAACAGCTGATTTCATAAACCAGCTTCCTGACCACAGTGTATCTCCATGCCCTGCTGCATATGCACCTTT ATTAAAATGA 

Protein sequence (LotjaGi2g1v0086200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEVSPVSVSDKCFFFSPPIRHSSSAYPLPSCNNYHRFRRRRWSYCCASNPDTLLAGGNAVVTAASGRKREVEHDDDDLKS WMHKHGLPPCKVVLKDKPSHDDTLKPIHYVAASEDLQVGDVAISVPNSLVVTLDRVLGNETVAELLTTNKFSELACLALY LMYEKKQGKKSFWYPYIRELDRQRGRGQMAVESPLLWSESELAYLAGSPLKDEILKRIEGIKKEYDELDTVWFMSGSLFQ QYPYDIPTEAFPFEIFKQAFAAIQSCVVHLQKVSLARRFALVPLGPPLLTYRSNCKAMLTAVEGAVELVVDRPYKAGDPI VVWCGPQPNTKLLTNYGFVDEENPYDRLVVEAALNTEDPQYQDKRMVAQRNKKLSIQVFYVYAGKEREAVSDMLPYLRLG YVSDPSEMPSVISSQGPVCAVSPCMERAVLNQLANYFKSRLAGYPTTLAEDESMLTDDSLNPKKRVATQLVRLEKKMLHA CLQATADFINQLPDHSVSPCPAAYAPLLK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 32 499 468 1.1E-271
PANTHER 32 499 468 1.1E-271
Gene3D 58 338 281 9.9E-42
SUPERFAMILY 76 343 268 1.05E-32
SUPERFAMILY 335 496 162 1.7E-31
Gene3D 340 493 154 7.5E-25
Pfam 357 478 122 1.7E-18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0086200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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