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LotjaGi2g1v0086200.2

Overview

Field Value
Gene ID LotjaGi2g1v0086200
Transcript ID LotjaGi2g1v0086200.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT5G14260.1 Rubisco methyltransferase family protein; Swiss-Prot: sp|Q9XI84|RBCMT_ARATH [Fructose]-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic; TrEMBL-Plants: tr|G7KNL1|G7KNL1_MEDTR Rubisco methyltransferase family protein; Found in the gene: LotjaGi2g1v0086200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:24888817..24893610) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAAGTTTCACCTGTCTCAGTTTCAGACAAGTGCTTCTTCTTCTCCCCTCCAATTCGCCATTCTTCTTCCGCTTACCC TCTCCCCTCGTGCAACAACTACCACCGCTTCCGCCGCCGCCGCTGGAGTTACTGTTGCGCCTCCAACCCCGACACCCTGC TCGCCGGCGGTAATGCCGTCGTTACCGCCGCTTCCGGCAGGAAGCGCGAGGTGGAGCACGACGACGACGACTTGAAATCT TGGATGCACAAGCATGGCCTCCCTCCGTGCAAGGTTGTTCTGAAAGATAAGCCTTCCCACGATGATACCCTTAAGCCTAT ACATTATGTTGCTGCCAGTGAAGATCTTCAGGTTTTTTTCTTTCGTAATTCATCGGTTTTGTGATTCTTATTTTCATTTT GGTGTTCTTGTTATTGATATGCTATGTCTTCTTTGGGTTGTGTTTCTTGCAGGTGGGCGATGTTGCAATCTCCGTTCCAA ATTCGCTGGTTGTCACTCTAGACCGTGTCTTGGGAAATGAGACTGTTGGTAATTATGCAATGCTTCTGATTCTTTGGTTA TGTCCTGTTCTTCTTTGCAACTGAATTATAGTAGAATGCAAATTGCATTGTTCCCGTTCCCCCTGTTAGCAGGTATGATA GGAAATTAGGAATTGAAATAGCTTGTAAACACAAACCCATTTCATCCTTAATTTGGTCCATATATTTCTTTTTTAAATAT GAGCCCTGTATGTATAATGACACATGGATTCACATAAAGTTAATGTAAAGTGCAAGGGCCAAACTGAAAAATGGTTATCA TGTTTAAGAGCAAAAACAGTATTTAAAGTCTTTATTTGTGACAATACTTTTTAATTTGGTTTATAAACTTTGCTGTGTTA TCGTTCCAAGTCTCCAAAAGTTGGTGTTAAAACTTAAAACAATAACAGTTTGTGAGAACCAAATGAAGAATGATTATATA TATAAGAATTGGCTTATAGGAAAAACTTATCATTTAGCTATAAGGAACTAACAAGCGATGAAGCTCACTGTTGTAAGGAT GAGAAAATTGGGATAGCTCCCGTTGCATCTTGTTTTAGGTGATTTGAGCATGTCGAGAATACTTATAGAACACCATTAAG GAAGATATAGACCAAATGGAGGATAGTCCTATAGTTAGAGGAAGAGGGAGATCAAAGAAAACTTGGTCTAAACCATTAAT AGAGATTTAGATGTAAATGGTTTTTAATGGGATTTGATTCATGAAAGGACATTATGGCATCATTTAATCCATGTAGCTGA CTCGACCTGGGAAGAAAAGACTTTGTTGTAATGTATATTTAAGGACTAAATTGAAAACTTATTTCTTATAGGGACTAATA GTAAATGAGCGTCACATAGAGGCACTGAGAATATATTTTATTTTAAGCTCTTTTCCTTGTTAGTTGTTTAGTTATGTGCA TTAAATAATAGGTCATAAATGCATTTTTAGTGTTTCATGGCTGATTTGATTTGAACTTTTCTGATAAGATGGCATATTGA TCCAAATTCTTGAATTATTTTATTTAGATGATTGATGTTTTGACGGAGGTATGTGATAAAGCAATAGCAGTAATCACTAA GGTATATCAGTTAGAGAGTTGTCAGAATCTGTTCTAACTTCTAACCAATTAGAAGTTAGAGGTCAGTTAGTTTGCCTAGA ATAGATAGTTGAAGGAAACAATAGGAGGAGGCTATAACTTGAATTGAGTGGAAAATGAGGAGCTTCTGGGTTTCTCTCAA ATATTCTGCCTATTTCGGAAATTCCTATATTCTTGAGGTTATCTCAGGTAATCTCTATTAAAGCAATTAAAGAAGTTCTT TCTCTGTTTTCTGATACCAGTTCTATCAGTATGTCATATTCCTCTGGTTAGTCATGTTTAGTGTCAGAAATGGATTAGAA ATTGTATGGAAGAGGTTCAGTGTTTGGGGTGACAAAACATGCTTATTCTAGAAAAGAATCTCAGAATTCATTTATAGGAC AATGAAAAGTGTGATTTTCGTCCATGCTTCTACTCAGTGAATTGATTTGTGTCTGTGTTGTTCAGGTGTAATAAATGTTA GATCAGTGGATTGGAAGTGTATTATTGCATTTTAACTTTTGAATTTATATCTCATGCTTTATCCTTATTGCAGCTGAGCT ACTGACCACAAACAAATTTTCCGAATTGGCATGCTTGGCATTGTATCTGATGTATGAGAAAAAACAGGGGAAGAAGTCTT TCTGGTATCCATACATTAGGGAGCTTGATCGTCAACGAGGTAGGGGCCAGATGGCAGTGGAATCGCCTCTTCTATGGTCA GAATCTGAGCTGGCTTACCTTGCAGGAAGTCCATTAAAGGTTTCCACTTCTCTGCCCCTCCCCCCCTCTTTTCTTTCTCT TATTAATGATGAATACAAAATCCAGTGTACTGATAAGTGATGATATTAAGTTCTTTTAATGCTTGATATTTTTCACATAT ATCCGGACTAAATTCTGGTGGTTGTGATTTAGGATGAAATTCTTAAAAGGATTGAAGGAATAAAAAAAGAGTATGATGAA CTTGACACAGTCTGGTTTATGTCTGGTTCTCTTTTTCAGGTAATTTACTGGTACTAGAACAAGTACAATTATTATTTACA TTGTCACTTGTTCTTACATTATATCATAATGCAGCAATATCCATATGACATTCCTACCGAGGCTTTTCCATTTGAGATTT TCAAACAAGCCTTTGCTGCTATTCAGTCTTGTGTGGTGCATTTACAGGTAAAGTTGCCTTCTTATCTAGTATATATTTGT ACAGCTAGTAAATTATGTGCAAGATCCTCTGAACTTTTTAGTACCTTACCAGTCTCTTCAGTTAATCTTGGTCTATTTTA ATGAGCATCTCATATTTGACCCTGAAATTACCTGAATGCAATGCCAATCTTCCATGCTGCAATTATATATCAGGCCACAG AGCTTTATATACAAGTTTATTCAATCTACTAATTTGTTAACATATTTTAACTTTTAATTGATTCTTTGATGGAACCCTGA TATTATTCAACTGAGAAATGTACAAGAAACAGATGAGTATTCGAGAGACTCATCACTCTCCTAAATCCCAATTCCCAAAT GATCCCAAAGATCCCTAAATCCTCTTCACACTCCCTTTTTTCTAGGCTAACCCTTAACTAACTAACTAACTAACTCTATA GGCTACCCTTAACTGACTAACTAACTCTAAGTACCCATCATTCTTGGATTTGTTAAATTATGTGAATTTGTGACAATGAA TTTAAAATTTAAAATTGATATTTTTGTTGTGACTACTGACTACAGAATGTAAATATTTTTCAGCAAACATGGATATTATT AATGCTCTTGTTTCTTACTTTTGCATCATGTACTAATTTCCTTGTAATCTTTGGTTACTTTCCACGATTGATCTGTTTAA GATTCATGCTAGACTTCTCATTGATTGATGTAGTTTTCTGTTAATGGCGTTTAATATGCCTGCTGGGAGGGAGCTAAGTG CTGCTCTTCTGTCTGACAACCGCAGTTGCTAATCTTGTCTATCTATCTATCTATCTGTTTTCAACAATGGGTGCAAATTG ATTGCTTGTCTTTTTGACATCAGAAAGTTAGTTTAGCTCGGAGATTTGCTTTGGTTCCACTGGGACCTCCTTTGCTGACC TACCGAAGCAACTGCAAGGCAATGTTAACTGCTGTTGAGGGTGCTGTTGAGCTTGTGGTTGATCGCCCATACAAAGCTGG GGACCCAATAGTCGTCTGGTATAAATATAATACATGCTTAACTGGACAATGCATAATTTGGATAATGTACTTATTTCTGT AGTAGTTGCTTCATTATAAAATTTATAGTTTGTCATTTTCAGGTGTGGCCCACAGCCTAACACAAAGTTACTTACAAACT ACGGTTTTGTTGATGAAGAAAATCCCTACGATCGTCTAGTAGTTGAGGTATAGTTGGTCATTTACTTTGTCCGTATTCAC TCTTGTTTCAATTAAAATTTAACCCTGCTTATACATGTGTCTCAGGCAGCTTTGAATACTGAAGATCCACAATATCAAGA TAAAAGAATGGTTGCTCAAAGAAATAAGAAGTTATCAATTCAAGTTTTTTATGTATTCATACTGAACTCTTAATTTCGTT TAAGTTATTTGGTGATTTTTCTTGTCAATTCCATAGTTTAACCCAACCTCGGTGCAGGTTTATGCTGGAAAGGAAAGGGA AGCTGTTTCAGATATGCTTCCTTATCTCCGTCTAGGCTATGTTTCAGATCCTTCTGAGATGCCATCTGTTATCTCTTCTC AAGGTCCTGTTTGTGCTGTAAGTTTGTCTATTCTTGTGTTTTCCTTTTCTGAATTTGAGGAATTTTAAGAATGCTAAAGA TCAAAAATCCAGTATCTGTCCTCTTGAATCTTGACTTTAATTATCCTTATAGGTAAGCCCTTGTATGGAGCGCGCTGTAT TAAACCAGCTGGCTAATTATTTCAAGAGTCGGCTGGCTGGTTACCCTACTACCTTGGCTGAAGATGAATCTATGGTACTG TTTGTTCGAATTAGAAGTTGACCAAGACTTGTTAACTTTTCATTGATAATTTATTTATTGCATTAGCTGACAGATGATAG TCTGAATCCAAAGAAACGAGTAGCTACTCAGCTTGTTAGGCTGGAAAAGAAAATGCTTCATGCATGTTTGCAGGCAACAG CTGATTTCATAAACCAGCTTCCTGACCACAGTGTATCTCCATGCCCTGCTGCATATGCACCTTTATTAAAATGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0086200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGTTTCACCTGTCTCAGTTTCAGACAAGTGCTTCTTCTTCTCCCCTCCAATTCGCCATTCTTCTTCCGCTTACCC TCTCCCCTCGTGCAACAACTACCACCGCTTCCGCCGCCGCCGCTGGAGTTACTGTTGCGCCTCCAACCCCGACACCCTGC TCGCCGGCGGTAATGCCGTCGTTACCGCCGCTTCCGGCAGGAAGCGCGAGGTGGAGCACGACGACGACGACTTGAAATCT TGGATGCACAAGCATGGCCTCCCTCCGTGCAAGGTTGTTCTGAAAGATAAGCCTTCCCACGATGATACCCTTAAGCCTAT ACATTATGTTGCTGCCAGTGAAGATCTTCAGGTGGGCGATGTTGCAATCTCCGTTCCAAATTCGCTGGTTGTCACTCTAG ACCGTGTCTTGGGAAATGAGACTGTTGCTGAGCTACTGACCACAAACAAATTTTCCGAATTGGCATGCTTGGCATTGTAT CTGATGTATGAGAAAAAACAGGGGAAGAAGTCTTTCTGGTATCCATACATTAGGGAGCTTGATCGTCAACGAGGTAGGGG CCAGATGGCAGTGGAATCGCCTCTTCTATGGTCAGAATCTGAGCTGGCTTACCTTGCAGGAAGTCCATTAAAGGATGAAA TTCTTAAAAGGATTGAAGGAATAAAAAAAGAGTATGATGAACTTGACACAGTCTGGTTTATGTCTGGTTCTCTTTTTCAG CAATATCCATATGACATTCCTACCGAGGCTTTTCCATTTGAGATTTTCAAACAAGCCTTTGCTGCTATTCAGTCTTGTGT GGTGCATTTACAGAAAGTTAGTTTAGCTCGGAGATTTGCTTTGGTTCCACTGGGACCTCCTTTGCTGACCTACCGAAGCA ACTGCAAGGCAATGTTAACTGCTGTTGAGGGTGCTGTTGAGCTTGTGGTTGATCGCCCATACAAAGCTGGGGACCCAATA GTCGTCTGGTGTGGCCCACAGCCTAACACAAAGTTACTTACAAACTACGGTTTTGTTGATGAAGAAAATCCCTACGATCG TCTAGTAGTTGAGGCAGCTTTGAATACTGAAGATCCACAATATCAAGATAAAAGAATGGTTGCTCAAAGAAATAAGAAGT TATCAATTCAAGTTTTTTATGTTTATGCTGGAAAGGAAAGGGAAGCTGTTTCAGATATGCTTCCTTATCTCCGTCTAGGC TATGTTTCAGATCCTTCTGAGATGCCATCTGTTATCTCTTCTCAAGGTCCTGTTTGTGCTGTAAGCCCTTGTATGGAGCG CGCTGTATTAAACCAGCTGGCTAATTATTTCAAGAGTCGGCTGGCTGGTTACCCTACTACCTTGGCTGAAGATGAATCTA TGCTGACAGATGATAGTCTGAATCCAAAGAAACGAGTAGCTACTCAGCTTGTTAGGCTGGAAAAGAAAATGCTTCATGCA TGTTTGCAGGCAACAGCTGATTTCATAAACCAGCTTCCTGACCACAGTGTATCTCCATGCCCTGCTGCATATGCACCTTT ATTAAAATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0086200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEVSPVSVSDKCFFFSPPIRHSSSAYPLPSCNNYHRFRRRRWSYCCASNPDTLLAGGNAVVTAASGRKREVEHDDDDLKS WMHKHGLPPCKVVLKDKPSHDDTLKPIHYVAASEDLQVGDVAISVPNSLVVTLDRVLGNETVAELLTTNKFSELACLALY LMYEKKQGKKSFWYPYIRELDRQRGRGQMAVESPLLWSESELAYLAGSPLKDEILKRIEGIKKEYDELDTVWFMSGSLFQ QYPYDIPTEAFPFEIFKQAFAAIQSCVVHLQKVSLARRFALVPLGPPLLTYRSNCKAMLTAVEGAVELVVDRPYKAGDPI VVWCGPQPNTKLLTNYGFVDEENPYDRLVVEAALNTEDPQYQDKRMVAQRNKKLSIQVFYVYAGKEREAVSDMLPYLRLG YVSDPSEMPSVISSQGPVCAVSPCMERAVLNQLANYFKSRLAGYPTTLAEDESMLTDDSLNPKKRVATQLVRLEKKMLHA CLQATADFINQLPDHSVSPCPAAYAPLLK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13271:SF9
32 499 468 1.1E-271 –
PANTHER
PTHR13271
32 499 468 1.1E-271 –
Gene3D
G3DSA:3.90.1410.10
58 338 281 9.9E-42 –
SUPERFAMILY
SSF82199
76 343 268 1.05E-32 –
SUPERFAMILY
SSF81822
335 496 162 1.7E-31
IPR036464
Gene3D
G3DSA:3.90.1420.10
340 493 154 7.5E-25
IPR036464
Pfam
PF09273
357 478 122 1.7E-18
IPR015353

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0086200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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