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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0087600 |
| Transcript ID | LotjaGi2g1v0087600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Blue copper protein; TAIR: AT3G27200.1 Cupredoxin superfamily protein; Swiss-Prot: sp|O82081|UCC1_ARATH Uclacyanin 1; TrEMBL-Plants: tr|C6SYZ1|C6SYZ1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0087600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:25556079..25560129) extracted from Lotus japonicus Gifu genome v1.2.
GCTTGCTCCATCAAAGAGTAGTTTGCTAGAGACAAGAGATCAAGTGGAAGATCTTGTTGTTGTTGCTTCCAATTGTGTGC TTACTTTCGCAAATCAAAAGAACGTGTAAGATATCTTCAAAAGAGAGGTACACAATTTATCCTGATTTTTATGGTGTTCT AATTGCTAGTATTGATCCAGTTAATATGTAATTTCTACCATTGCATCATTCTTATATGCCCCCAGATTCTTCTGAGTGAA ACCTACAGATATGGAAAACGTGGTTCCAAGTGTGCTAAACAACTGTTAGACTTAGATCTCTTATACCGTGTTGGAGATGC TAATATTCAGGATATTGTGGAAGTGATTTGCAATTGGCCCACTGTTGATGGTGATGTCGTGATGAAGATGCAGGAAAAGT TGAGTCAAGAAAGGAAGTGAAGAGCTTAATATATTCAATCGATTAATTTCATAATCAAGAGCTTGAATTCCTAGTAAAGG TCTAGTGGGGAAGAAGTGGGAGGAAGAGGAAAATAGTAAAGGGAAGGGGAAATTTGAGAAGTCTAACTCAACCCAAAAGT TAGTTCAAGAGTTGAGGATTGCTTTAAAAAAAAAAAAAAAAGTTAAGGGTTGCTCTACCCTTAATAAATACTTGTTTGGT CATATCTCTAACTATTGTGAGACTTCTAACAGACATCCCCATGCCCAATGTTGGACATTAGGATGGTGGAATGAACATCA CGAGTGGCACAAATATGGGAGGCATCCATAGCAAATGGATCTAAGAATAAACTCTCATACTATATCAAACAACCAATTAT CCTAAAACTTTAAGTGGTTAGGTAAGGATCACATTAATAGTTTTATATTATATGATAACACGTCCACTCACGCAAGAGTC CTTCAAACGTGAAGCGTAGATAAACGCATAGGCCCACCTACCATGTGCTTAAATTCCAATTTTTAATTAAAAAGTGAGGG GAGTGAGGATCGAACTCTAAACCTCTAAGTCATAGAGACTCAGATACCCTTTAGAATTAGGGAGACCTAACTCAACTCAA AATTAACTCCAGAATTTAGGATTGCTCTACTCTTTATAAACATTTTGTTAACCATATGTCTAACTAATGTGACTTATAGA CAAACAACACACCTTAACTTTATAGGAAACTTTCACTATATGAATAGTGAATCACTCAGTGTATTGAGAGTGCTAGGTAA GTTGGATTGGTTTGTTGCTGGAGTACTACCAAGAATTAGGTAGTCAATATTAGTTATTAAAAATGCATTGTCCACGAAAT TCTTTGGAGCTCACTACTTATGCAGTTAATGATTGTTTAATTTTGAGTGGACGCTTTGAGCATTGTTTATTTGCCTATTT TTGCGTCTGATTAAAAAAATCATTTTGTGAGGATGAATTAAAAAATTGTAGGGGTAAGGCAATCAAGAGGAACAACTTAA ATAACTTGGTTTTATCAAAAAAATTCTTCACTATTAAGATTTTCCCATATACTATATATTCCAAGAGTGCATCTAACAAA TTATAATTACACAAGTTCATTCTATTATTCAAAATTTGTATAACCTGAATTTTGTTCTTTTTATTTTGATCATATTTCAA AATATTATTATATTAATATCAGCTCGTGTGACGCACGTGTTATCATCTAGTAGTACGTATTAAAAATGAGAAAAATTGTC GGGGAAAATTTCCCCTTTCATTCGACATGCATTTATTCCTATCTGTTTGGTGAACGATTTATAATTTCAGACACGTCCTA GCTTGTGGTGGTGTTCTCTGAGTCAAATCCACCGAAATTATCTTATAACCAAAGAATTTGAATTAAATTTTGAGCATCAA GACTGGCTATCCCTGAAGATTTGATTCTTGTATCTTTGTTTGAACGCCAAGCTTTAACAACTTGTACCCACCAAAAGAAT ACTTGGCGGCCAATCCAAAAAAAAACTGAAAACGGATACATACTTCCATTGCACCATTGCTTTGCCCTGAAATCAAACAT ATTGCCAAGCTATGTGGAGCCAATCCGGACTAGGCATTTGTTATATTTACTAATTAAGAAGTCACTTTGCAATGAACTCA CAATTGAATATTATTTTTTTCATTACACCAAGAGTGAAAGCTGCTTATTATGTGTAACAGTGAAAGCTGAGACACAAGAT GTGTTTCTTTGTGTATAAATAGGAGTGACTCATAACAATGATCAAACAAAAGAAAAAAAAGAAGTAATAAGCAGAAGCCT GAAAGAAAATAACAAAACAATGGGGTGTAAGAACACATTTTTCTTGGTACTGGTAGTTACCTTGATCACAAAGGAGGCCT TGGCAGCAAAACATCTTGTTGGTGGAAGCCAAGGCTGGGATCCTTCCACAGACTTTAATTCATGGGTTTCAGGCCAAACA TTCAAGGTTGGGGATCAACTTGGTATGCTTCTTATCTATAAGTACCTTAATCTCTTTCACTATGTTTTGATAAAAGTTTT GAATTATACTTGTAGCTTTGCTTTCGAACCTGGGACTTATTGGTGTTTGGATTTTCCGAATTAACCAACAAGCACCAGGA AACCCACAATTACACTTGTAGCTGCATTTATAGTGCTATTATTAAAATTATAGAAAAGGTTAAATATGTATTTAGTATGA ATTATACTTCGTCAATCTAAAAAAGTTCACAGTTTTTAGATCCCAACATTGATGAAATTGGTGGAGTTTTTTGTGGTGGT GCATTTCATGCTGGTTTAAACTGGCAATAAACTATTTTGTGGCCGTTAACATGTACACAAATGCTGAAATGCACAAAGAC TACCGCAAAATGAACCGGTGGAACTAAATTCACATATATAATTAATGTTCTGGAGTAAAAGTTTTGAAACTTTTTAGAGT AACTCACCCATATATTGTGGAACTAATAACATATTTAACCCTTACAAATATTGGAAGCTAGTATAGCTCTTCAACTAGAA TTGTAGTTGCTATTCCAAGGCCTTTACAAAGATAGACTGAATAGCAGTGCTCTTGGTTGGGAGTAATATCTAGTAGGATA AAACCAGTTTCATCATGTTAATTTGCTTTCGAGTTTGTTGTAATTGGAGGTACTTTACTTCTACTTGCCATTACTTCTCT CATCCCGCCATTTTGAGTGCTTCCGCCTTTTAGTTGGGGCTACTGATCAAAACTATCCCCTCGCTTCACTTGTGGTCGAT TACCCTTCCAAAGGATTTAGCTAGGAGCTAAACGGTTTAAAAGCTCCCCTTCTCTAGCGAGCCAGCAATAGAATATGCTT TGGAAATAGAGCTGCAACTTTATAATTGCTGCAATTGCAATCACAGACTGCAAATTAAACCCTTGATTTTAATAATTTTT GTGCAGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAACTGGGAAGCGAGAGCGCCTACAAGAATTGTGATATTAGC AACACAGTCAAGTCCTTGAGCAGTGGCAACGATGTTGTCAAATTGGACAAACCTGGTACGAGGTACTTCACTTGTGGTAC CTCAGGCCATTGTGGTCAAGGCATGAAGGTGAAGATTACAATAGGAAAAGGGAATGCACTTTCTTCTTCCCCTGCACCAT CACCATCGTCATCAACAACAACAACATCATCATCATCGTCGTCATCATCATCATCGTCATCACCAACATCATCATCACCA TCATCTTCCTCTGCATCTTCTTCCACTACTTCTAATGTAGCTTCAGCCTCAAGATGCTTCACCAATTTTGTGCTCATTGT TGCAATATTGGTTGCCACAATGTTTTAATTGATAATTTGAAGTTTATAATTGATAATATGTACACTTGTGGGATATGATG GTAGAGCAATTTTAATTGACCGCACCACATTCCACTAGTTAGTCTCTTTATGAGTACGAGACTGAGAAGGCACATGTATA CCTTATTTATCTATCTATCTATTTATCTATCTATCTATCTATCTATAAACTATATAAAGGGAGAGTTTGTGCAATTTTGG GGGCAAACCTGACATTCAACAATTAATTTCAAAAACTATGAAAGTTTGGCA
CDS sequence (LotjaGi2g1v0087600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGTAAGAACACATTTTTCTTGGTACTGGTAGTTACCTTGATCACAAAGGAGGCCTTGGCAGCAAAACATCTTGT TGGTGGAAGCCAAGGCTGGGATCCTTCCACAGACTTTAATTCATGGGTTTCAGGCCAAACATTCAAGGTTGGGGATCAAC TTGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAACTGGGAAGCGAGAGCGCCTACAAGAATTGTGATATTAGCAAC ACAGTCAAGTCCTTGAGCAGTGGCAACGATGTTGTCAAATTGGACAAACCTGGTACGAGGTACTTCACTTGTGGTACCTC AGGCCATTGTGGTCAAGGCATGAAGGTGAAGATTACAATAGGAAAAGGGAATGCACTTTCTTCTTCCCCTGCACCATCAC CATCGTCATCAACAACAACAACATCATCATCATCGTCGTCATCATCATCATCGTCATCACCAACATCATCATCACCATCA TCTTCCTCTGCATCTTCTTCCACTACTTCTAATGTAGCTTCAGCCTCAAGATGCTTCACCAATTTTGTGCTCATTGTTGC AATATTGGTTGCCACAATGTTTTAA
Protein sequence (LotjaGi2g1v0087600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCKNTFFLVLVVTLITKEALAAKHLVGGSQGWDPSTDFNSWVSGQTFKVGDQLVFKYSSLHSVVELGSESAYKNCDISN TVKSLSSGNDVVKLDKPGTRYFTCGTSGHCGQGMKVKITIGKGNALSSSPAPSPSSSTTTTSSSSSSSSSSSSPTSSSPS SSSASSSTTSNVASASRCFTNFVLIVAILVATMF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 7 | 151 | 145 | 9.5E-70 | – | |
| PANTHER | 7 | 151 | 145 | 9.5E-70 | ||
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 21 | 126 | 106 | 1.0E-34 | ||
| SUPERFAMILY | 22 | 120 | 99 | 7.55E-33 | ||
| CDD | 23 | 120 | 98 | 2.17559E-44 | – | |
| Phobius | 23 | 194 | 172 | - | – | |
| ProSiteProfiles | 23 | 122 | 100 | 41.062 | ||
| Pfam | 34 | 114 | 81 | 2.4E-23 | ||
| MobiDBLite | 125 | 168 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of LotjaGi2g1v0087600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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