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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0091700 |
| Transcript ID | LotjaGi2g1v0091700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G17980.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A072UIE1|A0A072UIE1_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi2g1v0091700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:27531764..27535146) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTTAACCCTCTCAGTCGCTTACTCAATGGCCCAGCCAGCAACAAGAATAAACACCAGCATTTTGGCGTAGTTAGTC TCAAACATCAGTATATGCATTGAAACCTGAAACGCACTGTTTCAAGAAAACCATCCGTGGTTGAAGAAAAAGACATCTCC CTAAACCGCACCATGGGCACGATTCGAAAACTCGTGGTTGAGGTTGTGGACGCTCACGACATCGCTCCCAAAGACGGCCA TGGTACCTCAAGCCCCTACGTGGTGGTCGACTTCTATGGCCAGAGGAAGAAGACCCGAACCACAGTTCGCGACCTGAACC CGGTCTGGAACGAAACGTTGTCCTTTAACGTGGGCGCGCACTCTGACATCTTCGGCGATGTGCTGGAGATTGACGTTTAC CACGACCTTAAGTACGGAGTGACCCGCCGGAACAACTCGCTGGGTCGGATCCGCCTTAGTTCCAGCCAGTTCGTGAGAAA AGGTGAGGAGGCTTTGATATACTACGAGTTGAAGAAGAAGAGCTTGTTCAACATGGTCCAAGGCCAGGTTGGCTTGAAAA TCTATTACGTAGACGAGGAGGTTGCACCACCACTTCCACTGAAGCAAAAGGAGTTGTTGCTGCAGACTGAGGAAGCGAGT ACTGAAGATAAAGCACCGCCGGAAGAAACAGAAACAAAGCCACCAGCTGAACCTGAAAAAGATGTAGAACAACCATCGAC AGTATCTTCTGAACCACCACAGGAAGGTGAAAATCCATCGGAGAAACAAAACGATGAACTAGAAACGCAACCGTCTCAAC TGCCAGAAGTTGAAAACAAAAAGCAGCTTGATCCGGAAGTGCTGCAACTGTCTCAACCGCCAAATGAAGGAAGTGATGCA GATAATGTGGATCCGGTACCAGATAAACCTTTTGTGATGGCGGCAACATCTTTGTCGAGGTCCAATTCAAAGATAAGATT CAGCGGAATCAACGTTCCACAACCACTAAGCAGGGCGGCTTCAACGACTAGTTTTACATCAGAAGCATCATCTGCGGAAA GCATGTCCATCGAACGGTCCTCGTTCGATCTCGTGGAGAAGATGCATTATCTCTTCATTCGTGCGGTGAAAGCCCGGAAC CTCCCCACCAACGGTAACCCGATAGTGATGATCGCTATTTCTGGAGGCCACGTCACGTCTAGGCCCGCGCAAAAGACCAC GTTATTCGAGTGGAACCAGACCTTCGCTTTTAGGCGTGACCCACATGATTCCTCCCCCATACTCGAGATCACCGTGTGGG ACCCATCAATAGGGGACCACGCGTCTGACGTGGACGGTCGTATCCTCCTGGGTGGAGTGTGCTTTGATGTGAATGAGATT CTAGTAAGGGACTCACCGGACAGCCCTTTAGCCCCACAATGGTACAGAATGGAAGGTGGTGGGGCTCATCACGGGGACCT CATGATAGCCACGTGGATCGGCACACAGGCTGACCAATCATTCGGCGACGCGTGGAAAAGTGACACCTCTAGTAATGTCA AGTCAAGAGCCAAGGTGTATCAATCACCGAAGCTATGGTACCTTCGTGCCACTATTCTAGAAGTTCAAGACGTTATGCCT TTAACATCGTCGAAGGAGGCATGGTTTCAAGTCAAAGCCCAGATTGGGTTTCAAGTTCTTAAGTCAAAATTGGTCGTCAC ACGCAACGATACCGTTTCATGGAACGAGGACTTTCTCTTTGTTGTTGCTGAGCCCATCACTGACTACCTTGTTATTACAT TGGAGAACCGACAACACAAAGCGCTAGTGAATGTGGGTTTGCTAAGAATACCTCTCACCGAGATTGAAAGGAGAGTCGAT GACCGGAGTATCGCGTCGCACTGGTTCACCTTCGAGAGCCCTCGTGAGGAGAAAAGTGGTTACAAGGGAAGGGTGCACCT TCGCTTATGCTTTGACGGTGGGTATCATGTGATGGATGAGGTAGTTCACATGTGTAGCGACTACCGCCCCACGGCAAGAC AACTCTGGAAACCTCCAGTAGGCACAGTGGAGCTCGGCATCATTGGTTGCAAAAATCTAGTACCGATAAAGACGGTAAAT GATAAAAGCTCAACAGATGCGTACTGCATAGCAAAATACAGTAACAAATGGGTACGTACGAGGACCGTATCTGATAGCTT GGAGCCGAATTGGAATGAGCAGTACATGTGGAAGGTGTACGATCCTTGCACTGTTTTAACCATTGGAGTATTTGACAACT GGGATGTGATTGAATTGGACAACCTAATTGAACCAACGAGACCTGATTTTCGTATAGGAAAGGTTCGGATCCGGATATCT ACGCTTCAAACGGGTCGGGTGTATAGAAATACATATCCTCTCTTTGTTCTCACACATGCTGGTATGCAGAAGATGGGTGA GATCGAGCTAGCAATAAGGTTCGTTCGCACGACGCAACGGTTGGATTTCCTCCACATCTATTCGCAGCCGGTGCTACCGT TGATGCACCACATCAAGCCCTTAGGGATGGTCCCGCAGGAGCTGCTCCGGAACACCGCCGTGAAATTGGTTGTGGGTCAT TTCTCAAGATGTGAACCTCCATTGAGAAATGAGGTGGTGTTTTACATGCTGGATGCTGACTCTCACAACTTCAGCGCACG AAAGGTGCGTGCCAACTGGTACAGGATTATCAATGTGGTCGCAGGAGTCATTGACATCGTACGATGGGTGGAGGATACTC GCGGGTGGAAGAATACGACGACCACAATTCTTGTCCACGCTCTAATTGTGATGCTTGTGTGGTTCCCAGACTTAATAATG CCTACGTTGTTGTTTTACGTCTTCACGATTGGCGCGTGGAACTACAGGTTTCGGGTGCGGGACCCACTCCCGCATTTCGA CCCCAAGATCTTGCTTGCTGATGTGGCAGACAAGGATGATCTCGATGAGGAATTTGATGTGGTGCCAAGCGCTCGACCAT ACGAGGTGGTGCGTGCAAGGTACGATAAGCTTCGTGTACTCGGGGCTCGTGTACAGGCGGTGCTGGGGGATTTAGCAACT CAGGGGGAGCGCGTGCAGAGTTTGGTGACTTGGCGTGACCCACGTGCGACGGGGATCTTTGTTTCAATGTGCTTGGTGGC TGCGTTGATAATGTATTTGGTGCCTTCGAAAATTGTGGCAATATCTTGCGGGTTTTACTATCTACGCCACCCTATCTTCC GTGATCGATTCCCGTCGCCGGGGGTGAACTTCTTTAGAAGGCTACCTTCATTGTCAGATCGAATTATGTAGTTTTTTTTT TGTTAACAAATTTAAAATTTACATCAAAAAGTTAATTGAATGAGATAGAAGATCAAAATCAAAAGTGTTATTATGTCAGC TTTTGTCTTTATAAACATTGGAG
CDS sequence (LotjaGi2g1v0091700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCACGATTCGAAAACTCGTGGTTGAGGTTGTGGACGCTCACGACATCGCTCCCAAAGACGGCCATGGTACCTCAAG CCCCTACGTGGTGGTCGACTTCTATGGCCAGAGGAAGAAGACCCGAACCACAGTTCGCGACCTGAACCCGGTCTGGAACG AAACGTTGTCCTTTAACGTGGGCGCGCACTCTGACATCTTCGGCGATGTGCTGGAGATTGACGTTTACCACGACCTTAAG TACGGAGTGACCCGCCGGAACAACTCGCTGGGTCGGATCCGCCTTAGTTCCAGCCAGTTCGTGAGAAAAGGTGAGGAGGC TTTGATATACTACGAGTTGAAGAAGAAGAGCTTGTTCAACATGGTCCAAGGCCAGGTTGGCTTGAAAATCTATTACGTAG ACGAGGAGGTTGCACCACCACTTCCACTGAAGCAAAAGGAGTTGTTGCTGCAGACTGAGGAAGCGAGTACTGAAGATAAA GCACCGCCGGAAGAAACAGAAACAAAGCCACCAGCTGAACCTGAAAAAGATGTAGAACAACCATCGACAGTATCTTCTGA ACCACCACAGGAAGGTGAAAATCCATCGGAGAAACAAAACGATGAACTAGAAACGCAACCGTCTCAACTGCCAGAAGTTG AAAACAAAAAGCAGCTTGATCCGGAAGTGCTGCAACTGTCTCAACCGCCAAATGAAGGAAGTGATGCAGATAATGTGGAT CCGGTACCAGATAAACCTTTTGTGATGGCGGCAACATCTTTGTCGAGGTCCAATTCAAAGATAAGATTCAGCGGAATCAA CGTTCCACAACCACTAAGCAGGGCGGCTTCAACGACTAGTTTTACATCAGAAGCATCATCTGCGGAAAGCATGTCCATCG AACGGTCCTCGTTCGATCTCGTGGAGAAGATGCATTATCTCTTCATTCGTGCGGTGAAAGCCCGGAACCTCCCCACCAAC GGTAACCCGATAGTGATGATCGCTATTTCTGGAGGCCACGTCACGTCTAGGCCCGCGCAAAAGACCACGTTATTCGAGTG GAACCAGACCTTCGCTTTTAGGCGTGACCCACATGATTCCTCCCCCATACTCGAGATCACCGTGTGGGACCCATCAATAG GGGACCACGCGTCTGACGTGGACGGTCGTATCCTCCTGGGTGGAGTGTGCTTTGATGTGAATGAGATTCTAGTAAGGGAC TCACCGGACAGCCCTTTAGCCCCACAATGGTACAGAATGGAAGGTGGTGGGGCTCATCACGGGGACCTCATGATAGCCAC GTGGATCGGCACACAGGCTGACCAATCATTCGGCGACGCGTGGAAAAGTGACACCTCTAGTAATGTCAAGTCAAGAGCCA AGGTGTATCAATCACCGAAGCTATGGTACCTTCGTGCCACTATTCTAGAAGTTCAAGACGTTATGCCTTTAACATCGTCG AAGGAGGCATGGTTTCAAGTCAAAGCCCAGATTGGGTTTCAAGTTCTTAAGTCAAAATTGGTCGTCACACGCAACGATAC CGTTTCATGGAACGAGGACTTTCTCTTTGTTGTTGCTGAGCCCATCACTGACTACCTTGTTATTACATTGGAGAACCGAC AACACAAAGCGCTAGTGAATGTGGGTTTGCTAAGAATACCTCTCACCGAGATTGAAAGGAGAGTCGATGACCGGAGTATC GCGTCGCACTGGTTCACCTTCGAGAGCCCTCGTGAGGAGAAAAGTGGTTACAAGGGAAGGGTGCACCTTCGCTTATGCTT TGACGGTGGGTATCATGTGATGGATGAGGTAGTTCACATGTGTAGCGACTACCGCCCCACGGCAAGACAACTCTGGAAAC CTCCAGTAGGCACAGTGGAGCTCGGCATCATTGGTTGCAAAAATCTAGTACCGATAAAGACGGTAAATGATAAAAGCTCA ACAGATGCGTACTGCATAGCAAAATACAGTAACAAATGGGTACGTACGAGGACCGTATCTGATAGCTTGGAGCCGAATTG GAATGAGCAGTACATGTGGAAGGTGTACGATCCTTGCACTGTTTTAACCATTGGAGTATTTGACAACTGGGATGTGATTG AATTGGACAACCTAATTGAACCAACGAGACCTGATTTTCGTATAGGAAAGGTTCGGATCCGGATATCTACGCTTCAAACG GGTCGGGTGTATAGAAATACATATCCTCTCTTTGTTCTCACACATGCTGGTATGCAGAAGATGGGTGAGATCGAGCTAGC AATAAGGTTCGTTCGCACGACGCAACGGTTGGATTTCCTCCACATCTATTCGCAGCCGGTGCTACCGTTGATGCACCACA TCAAGCCCTTAGGGATGGTCCCGCAGGAGCTGCTCCGGAACACCGCCGTGAAATTGGTTGTGGGTCATTTCTCAAGATGT GAACCTCCATTGAGAAATGAGGTGGTGTTTTACATGCTGGATGCTGACTCTCACAACTTCAGCGCACGAAAGGTGCGTGC CAACTGGTACAGGATTATCAATGTGGTCGCAGGAGTCATTGACATCGTACGATGGGTGGAGGATACTCGCGGGTGGAAGA ATACGACGACCACAATTCTTGTCCACGCTCTAATTGTGATGCTTGTGTGGTTCCCAGACTTAATAATGCCTACGTTGTTG TTTTACGTCTTCACGATTGGCGCGTGGAACTACAGGTTTCGGGTGCGGGACCCACTCCCGCATTTCGACCCCAAGATCTT GCTTGCTGATGTGGCAGACAAGGATGATCTCGATGAGGAATTTGATGTGGTGCCAAGCGCTCGACCATACGAGGTGGTGC GTGCAAGGTACGATAAGCTTCGTGTACTCGGGGCTCGTGTACAGGCGGTGCTGGGGGATTTAGCAACTCAGGGGGAGCGC GTGCAGAGTTTGGTGACTTGGCGTGACCCACGTGCGACGGGGATCTTTGTTTCAATGTGCTTGGTGGCTGCGTTGATAAT GTATTTGGTGCCTTCGAAAATTGTGGCAATATCTTGCGGGTTTTACTATCTACGCCACCCTATCTTCCGTGATCGATTCC CGTCGCCGGGGGTGAACTTCTTTAGAAGGCTACCTTCATTGTCAGATCGAATTATGTAG
Protein sequence (LotjaGi2g1v0091700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTIRKLVVEVVDAHDIAPKDGHGTSSPYVVVDFYGQRKKTRTTVRDLNPVWNETLSFNVGAHSDIFGDVLEIDVYHDLK YGVTRRNNSLGRIRLSSSQFVRKGEEALIYYELKKKSLFNMVQGQVGLKIYYVDEEVAPPLPLKQKELLLQTEEASTEDK APPEETETKPPAEPEKDVEQPSTVSSEPPQEGENPSEKQNDELETQPSQLPEVENKKQLDPEVLQLSQPPNEGSDADNVD PVPDKPFVMAATSLSRSNSKIRFSGINVPQPLSRAASTTSFTSEASSAESMSIERSSFDLVEKMHYLFIRAVKARNLPTN GNPIVMIAISGGHVTSRPAQKTTLFEWNQTFAFRRDPHDSSPILEITVWDPSIGDHASDVDGRILLGGVCFDVNEILVRD SPDSPLAPQWYRMEGGGAHHGDLMIATWIGTQADQSFGDAWKSDTSSNVKSRAKVYQSPKLWYLRATILEVQDVMPLTSS KEAWFQVKAQIGFQVLKSKLVVTRNDTVSWNEDFLFVVAEPITDYLVITLENRQHKALVNVGLLRIPLTEIERRVDDRSI ASHWFTFESPREEKSGYKGRVHLRLCFDGGYHVMDEVVHMCSDYRPTARQLWKPPVGTVELGIIGCKNLVPIKTVNDKSS TDAYCIAKYSNKWVRTRTVSDSLEPNWNEQYMWKVYDPCTVLTIGVFDNWDVIELDNLIEPTRPDFRIGKVRIRISTLQT GRVYRNTYPLFVLTHAGMQKMGEIELAIRFVRTTQRLDFLHIYSQPVLPLMHHIKPLGMVPQELLRNTAVKLVVGHFSRC EPPLRNEVVFYMLDADSHNFSARKVRANWYRIINVVAGVIDIVRWVEDTRGWKNTTTTILVHALIVMLVWFPDLIMPTLL FYVFTIGAWNYRFRVRDPLPHFDPKILLADVADKDDLDEEFDVVPSARPYEVVRARYDKLRVLGARVQAVLGDLATQGER VQSLVTWRDPRATGIFVSMCLVAALIMYLVPSKIVAISCGFYYLRHPIFRDRFPSPGVNFFRRLPSLSDRIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 94 | 94 | 14.334 | ||
| Phobius | 1 | 828 | 828 | - | – | |
| Gene3D | 3 | 165 | 163 | 8.4E-25 | ||
| SMART | 6 | 109 | 104 | 6.5E-12 | ||
| Pfam | 6 | 103 | 98 | 6.5E-17 | ||
| PANTHER | 6 | 1032 | 1027 | 0.0 | – | |
| SUPERFAMILY | 6 | 134 | 129 | 7.26E-22 | – | |
| PANTHER | 6 | 1032 | 1027 | 0.0 | – | |
| MobiDBLite | 153 | 176 | 24 | - | – | |
| MobiDBLite | 153 | 246 | 94 | - | – | |
| MobiDBLite | 179 | 193 | 15 | - | – | |
| Gene3D | 288 | 428 | 141 | 8.7E-10 | ||
| SUPERFAMILY | 303 | 428 | 126 | 2.83E-12 | – | |
| SMART | 306 | 405 | 100 | 8.3E-9 | ||
| Pfam | 306 | 401 | 96 | 3.1E-5 | ||
| Gene3D | 442 | 587 | 146 | 6.5E-10 | ||
| Pfam | 462 | 566 | 105 | 1.9E-5 | ||
| SUPERFAMILY | 462 | 608 | 147 | 3.57E-18 | – | |
| SMART | 463 | 560 | 98 | 0.086 | ||
| Gene3D | 597 | 753 | 157 | 9.7E-22 | ||
| SUPERFAMILY | 617 | 771 | 155 | 1.1E-22 | – | |
| Pfam | 617 | 730 | 114 | 1.3E-20 | ||
| SMART | 618 | 727 | 110 | 8.5E-13 | ||
| ProSiteProfiles | 618 | 712 | 95 | 9.435 | ||
| CDD | 619 | 747 | 129 | 6.05263E-51 | – | |
| Phobius | 829 | 847 | 19 | - | – | |
| Phobius | 848 | 858 | 11 | - | – | |
| Phobius | 859 | 884 | 26 | - | – | |
| TMHMM | 864 | 886 | 23 | - | – | |
| Pfam | 876 | 1032 | 157 | 7.3E-66 | ||
| Phobius | 885 | 974 | 90 | - | – | |
| TMHMM | 975 | 997 | 23 | - | – | |
| Phobius | 975 | 1004 | 30 | - | – | |
| Phobius | 1005 | 1032 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0091700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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