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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0099000 |
| Transcript ID | LotjaGi2g1v0099000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nodulin-like / Major Facilitator Superfamily protein; TAIR: AT2G39210.1 Major facilitator superfamily protein; Swiss-Prot: sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4; TrEMBL-Plants: tr|O81120|O81120_LOTJA Nodule-specific protein Nlj70; Found in the gene: LotjaGi2g1v0099000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:32503537..32510164) extracted from Lotus japonicus Gifu genome v1.2.
AGCTCAAAGGTTCCATCTTTATTTTATTTTTATTTTTTTTGATAGGCTCCATCTTTATTAAATAATACACGAAAGAAAAG ATCCAAACTCATGTATAGATTATATGTGCTCTCCAACTCTTTCCAGCTCCGTAAGTCTAAGCCATCTCGTTTCTTCTTTG TTCCAATTGAGAAAATAGTCTCCAAATTCACGTAGAAGTATTAACTTGCTTGCTTTCTTTTGAAACATAGAAAATGATGT TCTGTACACTACATCCAGGAAATGGTTGCAAAAACATCAAAGGATTTTCCCTCCAAGTCCTAAAAGGGAGGTGGTTCATG ATGTTTGCATCATTTATGATGATGTTAGTATCAGGAGCTAGCTACATGTTTAGCCTCTACTCCAGAGAAATCAAGTTTGC TCTCGGGTATGACCAATCCACTCTCAACTTGTTAAGTTTCTTCATGGACTTAGGTTCCCACATAGGCATTCTCTCAGGTC TAATAAACGAGGTCACACCTCCTTGGGTTGCGTTATCAATGGGTGGGGTTTTCAATTTTTTTGGTTATTTCATGATTTGG CTTGCTGTGACTAAAAAAATTGCAAATCCCCAACTGTGGCACATGTGTTTGTACATTTTTATTGGAGGCAATGCTCATTG CTTTACCAACACTGTAGTTCTGGTGACCAGTGTAAAGAACTTCCCTGGGATCCGGGGCATTGTCATAGGCATTGCAGAGG GGTATTTGACTTTGAGTGCAATAATCTTCACTCAGCTCTACTATGCCTTCTTCGAAAATGATTCCAAATCTATGATTTTG CTCATGGCATGGCTACCAACTGCGACTGCTTTAATTTTCCTACCAGTTATCAAGAACCACAGGAGTATTCAACAGCCAAA TGACTCCAAAGTTTTCCATAGGTTGATCTACCTGATACTTGTTCTTGCAGGGTTCCTCATGATTATTATTGTTGTACAAA AAATTTTCAACTTCACTCAGACTGAGTATTATGTCACTTCTACTGTGATGATTCATTTGCTTACCCTTCCACTTACTGTT GTTATTGTGGAAGAATACAAGGTTTGGAAGAGCAAACAAGACCATATCAATTGTGAAAATCCTCCAAGCCCCACGGATGT AGCAGCAACAACAACAACGAAATCTAATCAAGTGAAGTATGAGCAGGCTCCTCATGCAGAACAGGCTCCCCGAAAAGGAG TTTCCTGTTTGCAAAACATTCTCAGGCCGCCGGAAAGGGGTGAAGATCATACAATACTTCAAGCCATTTTCAGCCTTGAC ATGGTAATTCTATTCCTTGCTACTATATGTGGATTTGGTAGCAACTTAACCGTGGTAAACAATTTGAGTCAGATTGCAAA GTCTTTAGGCTACCCTGCACACACCATAACCACATTCATCTCCCTCATGGCAGTTTGGATTTTTCTAGGTAAAATTGCAC AAGGGGTTGTATCAGAATTTATGATAACCAAATTGAAAACCCCTAGGCCTCTCATGCTCACAATACTCCTTGTTTTGTCG TGTATTGGTCACCTTTTAATTGCATTCAATGTTCCAAATGCTCTATATATAGCCTCAATTGTTATTGGGTTTTGCTTTGG GGCAATCTGGCCAATTCTTTTTTCCATCATATCTGAATTGTTTGGCCTCAAACATTACTCAACATTGTATAATGTTGGGA CATTAGCGGTTCCAATTGGGTCATACTTGTTCAATGTGATGGTCGTAGGGTATCTGTATGACAAGGAAGCCAGAAAGCAA ATGAAAGCATTGGGGCTAGAAAGAAAGCCAGGAGAGGAATTGAACTGCAATGGGGGCGAGTGCTACAAATTGTCTTTCAT TATAATAACTGTAGTTTGTTTGCTTGGGGCACTTGTATCATTCATTTTGGCGCTTAGGACTAAAAAATTCTACAAAACTG ACATATACAAGAAATTCAACGAAGAATCTAGAACTGCAGAAATTGAAAGTGTTGTTCCTCAACAAGAATGAACCACATGC TGCTGCAGACGAAGGCTCTATCTTCTCCAAGGAAATGGTAAAAGAAAAACTTGGGGTGAGCACCACCTTTAATGGTAAAG GTTATTGTAACAATCTCAATTCTTAGCCACTACCGCAACCTTTAATTTTCCCTATTTTTATTTTTATGTATTTTTATGTT TTTATCACATCATATTATATTTTATACTTAATTAAGTTTTTGGTTCCTAACCTTTACACCACTTTTGGTTTTAGACCCCT CGCAAATGTGGGAGGTCGTCCCTATCCTTTGAGGCATTGTTTGGTTTTAGTCCCTTCGGTAGTCAACGCCGGAGCTCCCA CAATTAGGGGTGAACATGGGCGGATAGATCCAATGAACCCGTCCAACCCAATCCGATCCAATAGAAAAAATGCGGGTTGG ATCGGGCAATCGGGTTAATCGGATGGATTTTACTACAACCCAACCAAGTTCGGATCGGATTTCGGATTCAGTTCAAATCC ATCCAACCCAACCCAGAATCCATACATATAATAATAATTTTTTTATAATTTTACTTATACTTGGAGTGCTAGTGTCGTAG TGATGACTTTTGAAACTTTGAGACTTAAGTATTTGTAATTATTTGTCATATTTGAACTTAGAGTATTTGTTCGTAGTTAT TTGTTACATGTTTATATATAGTTATTTGGCATGTTGGAGACATCTAAGTTCTAAGTGTCATGTCATGACATTTAGTGTTG TTTTTCACTTTTTAGGTACTATTTATGTTAGATTGTTTCATGTCATTTGGTAATGAAGTTTTATGTTTACATGATATTTG GCTATATATAATTTATGTGGTATTATTTCATGCTATTTGATATGACTTTTTGTGTCTTTTTCATGTTATTTAGTATTATA AGATATTTAATATTTTTTATAACTTTTTCTGAATTTATAATAATTTTTACAAGATTTTTAATATTTCAGAGATATTATTA TTTTAATATAGCGACCCAATCAATCCATCCAACCCAATCCGAACTTCGTCGGGTTGGTTCGGATCGGGTCCGAAGAAGAA ATTCGTGAAATCCAACCCAACCCAACCCAGACAATTTTGATCGGTTCGGATTTTATTTTGACCAAAATTCATCCAACCCA ACCCATGTGTACCCCTACCCACAATCCCTTGTGTGTCTACGACGTCATTCATGGCCATCATCCCTAACCCACTGTTAGAG CATAACCAACAAACCCTGAAATCCAGGAAAGCCAACCAAACTCCTTCCCTTGAAACCCTCGCTCCTCAAGTTGGAGATCA GAAATCCCTTCTTCATCGCACTGTCGTCGTTCCACAACAAGTGCTCAAACCTCTACTTCACCTCCCAACCGCGTTCACCC TCACTCCCCACGTTCACTCTCGATCCCGACACACATGGCTTAATCTACAACTCGATCTACTCACTGCGTTCTCCGTTTCT CTACCGAATATAGGTTGGGGTTTTGGGATTTTTTGGGGTTTGTTGGTGGTTGGTGGTGGTAGCTCAACACGGTGGGGTTG CTGGAAGAAGGAGAAGGGGAGTTAGTGTTTGTTGGAAAAGGAGACCTTACCAGCAATCTGTGAGTATGGCTTCCATAAAT TCTAATACTGATGTTGCTACTGCTTCAAATCTAGTTTGTTGGGTTTTCTATTCACCCTAGTCGCCATTCTCCTTCAAGCT TGAATATTTTCACCTTTCGTGTGCAGATATGATTTTTGATTCTCAATTTCTTCTTCGCTTTCAATTTTTTGTTCATGATG ATGGGGATGAAGATGAAGAGGTGAATATTAAGATGGATGATGAAGAACAAAATCTGGTCTTTTATGAAGATGATATGGGG ATGAAGAGTTTTGTAATTAATAATTTTTTGATAGGCAAATGTTAGTTGTTAGAAATGTTAGTAAATTAGTCCTTCCTCCG GGTTCGAACCCGGGACCCTTCACCCTCACCCCACCCAACTCTTATGTCCCTAGCTCTTACCACTTGAGCTATCCTTCGGG GACTTGTAATTAATAATTAATTAGGATGAATATATTTAAGAATTTTAATTATGAGTTAATTTTGACCCCGAACATGAACG CAAGAGAGAGGTTAGAGAGAGAAGCTCCGCAGGAGCTCCTCCACCACGGTGGTTTCCGACTTGGCATCAGCGGCAACAGG GGCCATCCCCGTGGCATGGAGAGCATGGTTGGCGAAATCAACAGTGGAGGAGGCTAGGAGTTTTTTAGTGCGGGCCAGTG TCGACAGCAGATAAAAAAAGGATGTCCTTCTCTGTGTTTGTGAATGGTTTGGGTGATCGAATTACGGTATCCAAGCTTTG ATATATCTTTTCCAAAGCAGGGAGCTTGAGTGATGTTTTTATTTAGTAGAAGAAGAAATATGTACGGCGGTTACAGTTTG GCTTCGTTCGGTTTCAACGGGATGATGAGGCATGGAAGGCAATTCGTTTGTTTAACGGATTGCAACTGGAGGGGAATTTT CTTTTGGTGAAGAAGGCTAAATATCAGCGTCCATCACGGGCTTCGACACCAGCGTCACCGCGACGACATCATTATGAAGT CCAAGGTAAGGTTTGGCGACAAAAAGTCCAACTTGTAACACAGGACAAAGCAAACCGGCCAGAACAGCAGAAGCAAGTGC AATTGCGAAAGGAAGCACAATTTGAAAAGCGGAACGAGCCTCGTTTGAATTTTGATTCTTATGTTTTGTATGTGGGGTAG GTGGAAAGGTGTGCTCAAGAAATCCCAAAGAAATCTGTGAGCATTAATGTGTTGCAGGATTCTCTTAATAAGACTGGCCT TTATAATTTCAGGCTCATTCCCATGGGTGCGAATGAGGTTGTACTTGAGTTTGAAAGCAAGGATGAAATTCTTATGGAGG TTGATATGGGTGGGACGTCGTGTATTATTTTGGTTGAGACGGATGCTTCTAGTTATGAGTATGGGTGTGCTGCACGAATG CTGTCAATGCTGGTTAAAGACTATGTGCCAGTTGACGATGAAAATTCAGGAGGCGACAGTAAGAATGGGGATGTGGTTTG TTCCAATGGTCCTAAGAAGGACTATAATTCTGTTGTGTATGTCGAGTCGGAGGAAGACGATGTTGATTTTACTATCGAAG TTGAAGAGGATCATGAAGTTAACCCTGGGGAGACTGAGGACGTTGTTATGTCTTTGAAGGAAGATATGTCGGTAAATCAT GGTGTAGGTTGTGCGTCTCAGGCAACGACTTGTACGCTGTCGACGATGGGTGCAGCAGCCAGGTTTGCCGTTGATGAGTG GCCGCAGAATTTTGAATTGTGACGTTACAGGAACGTGTGTCATGGGACAGTTACATTATCTTTTGGATTCTGGTTATTAA GAGGAGAAAATCTTTGATCGGAAAAGGTCAACAGTAAGAAAAGAGCTATCATATAGGGATTTTCAAATTTTGAATGATGA ATTGTCTCATACCTATAATGGTGGAAGTCAGAGAGCAGTTACAGGATTTTCTTTTAATTATCATGATTATTATGCAGCAA CAAGTCTCTATTTTCCTTCTTATCTTTTTTATTAGAACCCTTGTTATTATGATAGTTTCTTTAAACCGTGTTTGGGATCA GCTTTGGACCAGCAAAAAACAGTTTTGGTTAATACCACTAAGTGTTGTTTGGGACGCACACTGGATGGAAAAAACGAGTT TGCTGCTGCTTCTGGTTTTTACGTGAATCAACCCAATTTTGCACACACCTCTGTGCACCAGATAGTGAAGGTGGATGATG TGACAGACATTGAACAAACATCATCCCTTCGTTACAGAGGAAAGCTTGGGTTGACTCAGAATCATTCCTCTTCTACGTCT CTTGGGTTGTGGCTTCTCCTCAATCGGGTTCTTCCAATAAAAGCTCTCAGCAGGGACGACTGAAGGGCATAAAAAATAAG TCGAAGCCATTACCGTTTGGTGTGACGACGCATGCACAACGAACTTGGTTGGTTGGTAAGCAGTTGGGTTTGAAGCCAAG AGGTTCATAGGCATTGAGGATCAAAGGATTGGAGACCCAAATTCATATTAATCATTCTCATCTCAGTTGATACGAACAGC AGAGTCGGGTAAGAGATTCATGGGTTCAAGTTGCAAAGAAATAGTGTTGCCACAAAGGATTGTTTGATTCAAATGGGCAT AACATTGCCTTGTGAAGGTGCTTGTATTATATGTAATGCAAAAGTTGAAACTTCCGGCCATCTTTTTTGCATTGTGATCG AATTTGAAAGTTCGGGTGGGAGGTAGTTCAAAGGGAAGGTTTATGTTGATTGTTGTTATGTGAGCAGTTTTAGATTCGTT CAGTCATCATTGAGAGCGATTCGACATTAGCGGTGGGCTGGGTAAATAGCAGAGAGAATAAGCCATGGAAACTCTGTCAG TCTTTGAAAAGAATTGACCACTTGCTGCTATTGTGAATTGTCTAGGAGTTAATCATATACTACGTGAGGATATAGCATGA CAGATTACATTACATGAGAGGGTTGTTCTCATGTCCTTTATCTCAATTAATAAAGTTCTTTTTGCTGTTAAAAAATGATT ACGAGCTATTTTTTTATTGGGTTAATCGTCTACTTGGTTTCTGTCTTTGTCTCGCCATCTGAAGTAAG
CDS sequence (LotjaGi2g1v0099000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTTCTGTACACTACATCCAGGAAATGGTTGCAAAAACATCAAAGGATTTTCCCTCCAAGTCCTAAAAGGGAGGTG GTTCATGATGTTTGCATCATTTATGATGATGTTAGTATCAGGAGCTAGCTACATGTTTAGCCTCTACTCCAGAGAAATCA AGTTTGCTCTCGGGTATGACCAATCCACTCTCAACTTGTTAAGTTTCTTCATGGACTTAGGTTCCCACATAGGCATTCTC TCAGGTCTAATAAACGAGGTCACACCTCCTTGGGTTGCGTTATCAATGGGTGGGGTTTTCAATTTTTTTGGTTATTTCAT GATTTGGCTTGCTGTGACTAAAAAAATTGCAAATCCCCAACTGTGGCACATGTGTTTGTACATTTTTATTGGAGGCAATG CTCATTGCTTTACCAACACTGTAGTTCTGGTGACCAGTGTAAAGAACTTCCCTGGGATCCGGGGCATTGTCATAGGCATT GCAGAGGGGTATTTGACTTTGAGTGCAATAATCTTCACTCAGCTCTACTATGCCTTCTTCGAAAATGATTCCAAATCTAT GATTTTGCTCATGGCATGGCTACCAACTGCGACTGCTTTAATTTTCCTACCAGTTATCAAGAACCACAGGAGTATTCAAC AGCCAAATGACTCCAAAGTTTTCCATAGGTTGATCTACCTGATACTTGTTCTTGCAGGGTTCCTCATGATTATTATTGTT GTACAAAAAATTTTCAACTTCACTCAGACTGAGTATTATGTCACTTCTACTGTGATGATTCATTTGCTTACCCTTCCACT TACTGTTGTTATTGTGGAAGAATACAAGGTTTGGAAGAGCAAACAAGACCATATCAATTGTGAAAATCCTCCAAGCCCCA CGGATGTAGCAGCAACAACAACAACGAAATCTAATCAAGTGAAGTATGAGCAGGCTCCTCATGCAGAACAGGCTCCCCGA AAAGGAGTTTCCTGTTTGCAAAACATTCTCAGGCCGCCGGAAAGGGGTGAAGATCATACAATACTTCAAGCCATTTTCAG CCTTGACATGGGTATCTGTATGACAAGGAAGCCAGAAAGCAAATGA
Protein sequence (LotjaGi2g1v0099000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMFCTLHPGNGCKNIKGFSLQVLKGRWFMMFASFMMMLVSGASYMFSLYSREIKFALGYDQSTLNLLSFFMDLGSHIGIL SGLINEVTPPWVALSMGGVFNFFGYFMIWLAVTKKIANPQLWHMCLYIFIGGNAHCFTNTVVLVTSVKNFPGIRGIVIGI AEGYLTLSAIIFTQLYYAFFENDSKSMILLMAWLPTATALIFLPVIKNHRSIQQPNDSKVFHRLIYLILVLAGFLMIIIV VQKIFNFTQTEYYVTSTVMIHLLTLPLTVVIVEEYKVWKSKQDHINCENPPSPTDVAATTTTKSNQVKYEQAPHAEQAPR KGVSCLQNILRPPERGEDHTILQAIFSLDMGICMTRKPESK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 9 | 353 | 345 | 8.4E-173 | – | |
| PANTHER | 9 | 353 | 345 | 8.4E-173 | – | |
| CDD | 25 | 237 | 213 | 1.38222E-54 | – | |
| SUPERFAMILY | 26 | 258 | 233 | 3.27E-9 | ||
| Pfam | 26 | 271 | 246 | 3.8E-78 | ||
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 27 | 46 | 20 | - | – | |
| Phobius | 47 | 65 | 19 | - | – | |
| TMHMM | 62 | 84 | 23 | - | – | |
| Phobius | 66 | 84 | 19 | - | – | |
| Phobius | 85 | 90 | 6 | - | – | |
| TMHMM | 90 | 112 | 23 | - | – | |
| Phobius | 91 | 112 | 22 | - | – | |
| Phobius | 113 | 123 | 11 | - | – | |
| Phobius | 124 | 144 | 21 | - | – | |
| TMHMM | 125 | 147 | 23 | - | – | |
| Phobius | 145 | 155 | 11 | - | – | |
| Phobius | 156 | 180 | 25 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 181 | 185 | 5 | - | – | |
| TMHMM | 186 | 205 | 20 | - | – | |
| Phobius | 186 | 203 | 18 | - | – | |
| Phobius | 204 | 223 | 20 | - | – | |
| TMHMM | 220 | 242 | 23 | - | – | |
| Phobius | 224 | 246 | 23 | - | – | |
| Phobius | 247 | 251 | 5 | - | – | |
| Phobius | 252 | 272 | 21 | - | – | |
| Phobius | 273 | 361 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0099000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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