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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0110400 |
| Transcript ID | LotjaGi2g1v0110400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|I1MVS7|I1MVS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:39569241..39573579) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCATTTCTCCACACACAGACTGAAAAGCTAACCGAAAGAAACAGAACCTCCTCTGTTTTTCACTGTTTCATTTCTCT TTGTTTCAGTTTTCTATTGAGAGCTTTAATGGCGGAAGATTCTGGAAGGAAGCTCGTGGTGGAGGTTTGCGATGCGAAGA ACTTGATGCCGAAAGACGGCCAAGGAACCGCGAGCGCTTACGCGATCGTGGATTTCGACAGCCAGAGACGGCGAACTACG ACAAAATCGAGAGATCTCAATCCTCAGTGGAACGAGAAGCTCGAGTTCATGGTTCACGACAAAGAGTCCATGCCTTCGGA AACGCTAGAGGTCAATCTCTACAACGACAAGAAAGCAGGTAAGAGAAGCACTTTTCTCGGCAAGGTAAAAATATCCGGAA GTACTTTCTCCAAGTCTGGTTCCGAGGAGATTGTGTACTATCCGTTGGAGAAAAGGAGCGTTTTCTCTCAGATCAAAGGG GAACTCGGCCTGAAAGTTTGTTTCGTCGATAACGATCCACCACCAGCTACCACCGAAGCCGCCGGTGAGGAGAAGAAGGA AGAAAAAGCAGAGGAGAAGCCGCCGGAGAACAAGCAAGACGGAGAGAAGAAGGAAGATAAAGCTGAAGAGGGGAAGAAAG AAGAGGAAAAGAAGGAAGACGATAATAAACCAAAAGAAGATTCCAAGGAAGAAGAAAAACCAAAGACAGAGGAAGCAAAA TCAAAGGAAGAGGTACCAGCGGAGAAAACGCCAACGCCAACGCCAGCACCGCCCCCTGCGGAGGTAGTGAATCCGCCGAT TGCTGAGGCGGAGAAGCCGAAGATGAAGGAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCACG AGCTCCGATCCGATCGGAGTCGCAGCGCCAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGCA AAGCTTGCAAATCCAGAACCTGATTCCGCAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTGA GTGTGAGGGCAAAGATTGGGATCAGGTTTTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTGT TCTCTGAGAAGGGTAAAGAAGGGAGCGATGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAGA GTTCCACCGGATAGTCCTCTGGCTCCACAGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTGC CGTATGGATCGGGACTCAGGCAGATGAGGCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACAC GAGCCAAGGTGTATCTTTCACCCAAACTTTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTCG GGATGCGAGCCTAAGGTTCGGAATCCCGAGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAAC CTCCCCAGGCTCAGCTAACCCAACGTGGAACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTTG TAACGGTAGAAGACGTGTCAAATTCAAAGCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGAC GATCGAACGGACCTAAAGTCCAGATGGTTCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATGT TCGTGTTTGCTTGGAAGGTGGGTATCACGTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAAC AACTCCACAAGCCTCCAATCGGTTTGCTAGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGAC GGGACACGTGGCACCACCGATGCCTATGTGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACCG GTTCAACCCGCGGTGGAACGAGCAGTATACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGACA ATGGAAGATACTGCAAAAACAGCAACAGAGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAAC CGTGTATACTTGAACTCCTATTCGTTAACGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAGT GAGATTCTCATGCTCTTCGTGGTTGAGCTTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGCC CATTCGGCCCAACCCAACAAGATGTCCTGCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACCG CCTCTGGGTCAGGAAGTGGTTCAGTTCATGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACTG GTTCAGGGTGGTGGGTTGTTTGTCACGCGCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCTC CCACGACGGTTTTAGTCCACGTGCTGCTCGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTAT GCGTTCTTGGTTTTGCTACTGAGATTCCGGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGGA CATGGTGAGCCTGGACGAGCTGGACGAGGAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGGT ACGATAGGGTGCGGGCGCTTGCGGGGAGGGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGCA TTGTTTAGTTGGCGGGACCCACGGGCCACTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGGT GCCGTTTAAGGGTTTTGTGCTGGGGGCTGGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATCT CTGCTAACTTTTTCCGGCGACTTCCGTCATATTCCGATCAGATTATGTGATGAAACATTATTTTATGGTGGTATTTTTAT TTTATTTTGTTTAATTATGTTGTTCTATGAGGTGTATTATTATTATTATTATTTTGAAATTTAGGTGTATTATTATTTAT TAATTCCTTTATTGATACTTCGGGAAAGTAGCCTCCATTAAACTGAGAAAAAGCAAAAAGTTGTTCCTGGTCTGCTGGCT GCTGCACTAAAAGGGAATAGAAAGTTACCGTTAGTGATGGACTTAACATATAAAAGGTGAACCCAACAAAACCTGTAATG AAATTAAAGACTTAAGACCGTTGATGTAGGATACTTGAACCGGAAGTAAATGCAGCTATGGCTCGTGTTAGTTGTGTATT GCCTTTTGTTTCCAATCCCTCATTAAATATTTTGTTACTTTTCCTGTTTCATAAGATCTCATGTTATTTTTTTGAGGTTT GGTTTCTGTTTCCCAGCCTTTTGTCTTTCATGATTGGATTATCCTTCTCACTTCATGATTCCATTTAAGAGATTGAGTTG AAATTTTCATAACACACCCATGTTGTTCAACTTCTAAAATTACTAAAGCTTTAAACAGAGCCATAAACCTTCACTTCTGA AAACCCCTCTTTCAAAATTGTCATGAAATTAACCTATGTTCATTTATACTTGGTGAGCTTTTGATTAGCCTCATTTTTGT GTGTTAAGATGGTTTCTAATCTTGTTTTTGAAGCCAAAACATAACTTGTTAGTTGTTATTTGTTAAATTTTCTAACTTGT CATGAAACTCCAGCATGTTTCACTAGAGCTTGCAAGAAAGCTTTTGAAAGAACTTTATAGCTGATTAGTCCCCGCTCCTT CACAAATGAAGCTCTGAACCAAGCTAATAAGTCCACCCCAGAAAATCCCTATTTCACTGTCAATATAAAGCCAAGTAACT GGAGAAATCACAGACAGGTAATGTTTGTTAAGAAGCAAATTACAGAGGTGAGGAGAATGGATCCTCTAATTAATGTCCCA TTTGTCATATTGAATTTTGCATATATGTACTTATCTTGTTGGATTTTCTACTGAGAGTTGGATTTACAAATAAGCTAGTT GAAAAATATATGAGATCCACATACCTGATGCCTTTGGATTTTGGGAGTCTTCGGTGTTAGCTCTTGTGTATGTTTTCCTT CTTTGGGATTCCAAGATGACAAAATCATATAAATCAACATGGGAAGATCCTAATTCCAGATTTCATTAATCTCCCAAGTT GCCATGAACAAAAAAAAAA
CDS sequence (LotjaGi2g1v0110400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGATTCTGGAAGGAAGCTCGTGGTGGAGGTTTGCGATGCGAAGAACTTGATGCCGAAAGACGGCCAAGGAAC CGCGAGCGCTTACGCGATCGTGGATTTCGACAGCCAGAGACGGCGAACTACGACAAAATCGAGAGATCTCAATCCTCAGT GGAACGAGAAGCTCGAGTTCATGGTTCACGACAAAGAGTCCATGCCTTCGGAAACGCTAGAGGTCAATCTCTACAACGAC AAGAAAGCAGGTAAGAGAAGCACTTTTCTCGGCAAGGTAAAAATATCCGGAAGTACTTTCTCCAAGTCTGGTTCCGAGGA GATTGTGTACTATCCGTTGGAGAAAAGGAGCGTTTTCTCTCAGATCAAAGGGGAACTCGGCCTGAAAGTTTGTTTCGTCG ATAACGATCCACCACCAGCTACCACCGAAGCCGCCGGTGAGGAGAAGAAGGAAGAAAAAGCAGAGGAGAAGCCGCCGGAG AACAAGCAAGACGGAGAGAAGAAGGAAGATAAAGCTGAAGAGGGGAAGAAAGAAGAGGAAAAGAAGGAAGACGATAATAA ACCAAAAGAAGATTCCAAGGAAGAAGAAAAACCAAAGACAGAGGAAGCAAAATCAAAGGAAGAGGTACCAGCGGAGAAAA CGCCAACGCCAACGCCAGCACCGCCCCCTGCGGAGGTAGTGAATCCGCCGATTGCTGAGGCGGAGAAGCCGAAGATGAAG GAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCACGAGCTCCGATCCGATCGGAGTCGCAGCGC CAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGCAAAGCTTGCAAATCCAGAACCTGATTCCG CAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTGAGTGTGAGGGCAAAGATTGGGATCAGGTT TTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTGTTCTCTGAGAAGGGTAAAGAAGGGAGCGA TGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAGAGTTCCACCGGATAGTCCTCTGGCTCCAC AGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTGCCGTATGGATCGGGACTCAGGCAGATGAG GCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACACGAGCCAAGGTGTATCTTTCACCCAAACT TTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTCGGGATGCGAGCCTAAGGTTCGGAATCCCG AGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAACCTCCCCAGGCTCAGCTAACCCAACGTGG AACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTTGTAACGGTAGAAGACGTGTCAAATTCAAA GCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGACGATCGAACGGACCTAAAGTCCAGATGGT TCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATGTTCGTGTTTGCTTGGAAGGTGGGTATCAC GTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAACAACTCCACAAGCCTCCAATCGGTTTGCT AGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGACGGGACACGTGGCACCACCGATGCCTATG TGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACCGGTTCAACCCGCGGTGGAACGAGCAGTAT ACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGACAATGGAAGATACTGCAAAAACAGCAACAG AGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAACCGTGTATACTTGAACTCCTATTCGTTAA CGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAGTGAGATTCTCATGCTCTTCGTGGTTGAGC TTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGCCCATTCGGCCCAACCCAACAAGATGTCCT GCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACCGCCTCTGGGTCAGGAAGTGGTTCAGTTCA TGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACTGGTTCAGGGTGGTGGGTTGTTTGTCACGC GCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCTCCCACGACGGTTTTAGTCCACGTGCTGCT CGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTATGCGTTCTTGGTTTTGCTACTGAGATTCC GGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGGACATGGTGAGCCTGGACGAGCTGGACGAG GAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGGTACGATAGGGTGCGGGCGCTTGCGGGGAG GGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGCATTGTTTAGTTGGCGGGACCCACGGGCCA CTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGGTGCCGTTTAAGGGTTTTGTGCTGGGGGCT GGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATCTCTGCTAACTTTTTCCGGCGACTTCCGTC ATATTCCGATCAGATTATGTGA
Protein sequence (LotjaGi2g1v0110400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEDSGRKLVVEVCDAKNLMPKDGQGTASAYAIVDFDSQRRRTTTKSRDLNPQWNEKLEFMVHDKESMPSETLEVNLYND KKAGKRSTFLGKVKISGSTFSKSGSEEIVYYPLEKRSVFSQIKGELGLKVCFVDNDPPPATTEAAGEEKKEEKAEEKPPE NKQDGEKKEDKAEEGKKEEEKKEDDNKPKEDSKEEEKPKTEEAKSKEEVPAEKTPTPTPAPPPAEVVNPPIAEAEKPKMK EKHGALQKRADLKVSDHELRSDRSRSANDLVDRMPFLYIRVVKAKLANPEPDSAIFSKLVIGTHTIRTKSECEGKDWDQV FAFDKEGLNSTSLEVSLFSEKGKEGSDEKSLGTVSFDLQEVPKRVPPDSPLAPQWYTLESDSSPGNDVMLAVWIGTQADE AFQEAWQSDSGGLIPETRAKVYLSPKLWYLRLTVIQTQDLQLGSGCEPKVRNPEFYVKAQLGAQVFKTGRTSPGSANPTW NEDLVFVAAEPFEPFLVVTVEDVSNSKPVGQAKIHVSSIERRTDDRTDLKSRWFNLSGEDENHSYTGRIHVRVCLEGGYH VIDEAAHVTSDARAAAKQLHKPPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIMDRFNPRWNEQY TWDVHDPCTVLTIGVFDNGRYCKNSNRDVRMGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKRMGEIEIAVRFSCSSWLS LMQAYASPILPRMHYVRPFGPTQQDVLRQTAMRIVTARLSRSEPPLGQEVVQFMLDSDTHVWSMRRSKANWFRVVGCLSR AATVLRWVDGIRMWTHPPTTVLVHVLLVAVVLCPYLVVPTVFMYAFLVLLLRFRYRSRALHSMDPRMSYVDMVSLDELDE EFDGFPTTRSAEHVRIRYDRVRALAGRAQTLLGDVAAQGERLEALFSWRDPRATGIFAVLCLVASLVFYAVPFKGFVLGA GFFYLRHPRFRDDMPSISANFFRRLPSYSDQIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 820 | 820 | - | – | |
| Gene3D | 3 | 214 | 212 | 8.1E-25 | ||
| PANTHER | 6 | 993 | 988 | 0.0 | – | |
| PANTHER | 6 | 993 | 988 | 0.0 | – | |
| Pfam | 8 | 106 | 99 | 2.1E-18 | ||
| CDD | 8 | 130 | 123 | 1.29385E-57 | – | |
| ProSiteProfiles | 8 | 94 | 87 | 12.647 | ||
| SMART | 8 | 109 | 102 | 5.8E-12 | ||
| SUPERFAMILY | 8 | 141 | 134 | 3.99E-25 | – | |
| MobiDBLite | 131 | 260 | 130 | - | – | |
| MobiDBLite | 143 | 211 | 69 | - | – | |
| Coils | 162 | 182 | 21 | - | – | |
| MobiDBLite | 214 | 228 | 15 | - | – | |
| MobiDBLite | 234 | 260 | 27 | - | – | |
| Gene3D | 272 | 394 | 123 | 1.0E-5 | ||
| SMART | 276 | 370 | 95 | 12.0 | ||
| Pfam | 277 | 376 | 100 | 0.0087 | ||
| SUPERFAMILY | 277 | 410 | 134 | 7.02E-10 | – | |
| Gene3D | 416 | 556 | 141 | 3.2E-18 | ||
| Pfam | 428 | 535 | 108 | 2.8E-15 | ||
| SUPERFAMILY | 428 | 575 | 148 | 6.55E-23 | – | |
| CDD | 429 | 574 | 146 | 6.15796E-58 | – | |
| SMART | 429 | 528 | 100 | 2.8E-6 | ||
| ProSiteProfiles | 430 | 513 | 84 | 8.606 | ||
| Gene3D | 566 | 715 | 150 | 7.1E-23 | ||
| SUPERFAMILY | 585 | 722 | 138 | 2.65E-24 | – | |
| SMART | 586 | 690 | 105 | 1.4E-13 | ||
| CDD | 586 | 710 | 125 | 9.41114E-56 | – | |
| Pfam | 586 | 693 | 108 | 2.1E-21 | ||
| ProSiteProfiles | 587 | 675 | 89 | 10.782 | ||
| TMHMM | 820 | 851 | 32 | - | – | |
| Phobius | 821 | 851 | 31 | - | – | |
| Pfam | 838 | 993 | 156 | 9.4E-67 | ||
| Phobius | 852 | 935 | 84 | - | – | |
| Phobius | 936 | 965 | 30 | - | – | |
| TMHMM | 936 | 958 | 23 | - | – | |
| Phobius | 966 | 993 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0110400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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