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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0110400 |
| Transcript ID | LotjaGi2g1v0110400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A151QV78|A0A151QV78_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:39569349..39572330) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAAGATTCTGGAAGGAAGCTCGTGGTGGAGGTTTGCGATGCGAAGAACTTGATGCCGAAAGACGGCCAAGGAAC CGCGAGCGCTTACGCGATCGTGGATTTCGACAGCCAGAGACGGCGAACTACGACAAAATCGAGAGATCTCAATCCTCAGT GGAACGAGAAGCTCGAGTTCATGGTTCACGACAAAGAGTCCATGCCTTCGGAAACGCTAGAGGTCAATCTCTACAACGAC AAGAAAGCAGGTAAGAGAAGCACTTTTCTCGGCAAGGTAAAAATATCCGGAAGTACTTTCTCCAAGTCTGGTTCCGAGGA GATTGTGTACTATCCGTTGGAGAAAAGGAGCGTTTTCTCTCAGATCAAAGGGGAACTCGGCCTGAAAGTTTGTTTCGTCG ATAACGATCCACCACCAGCTACCACCGAAGCCGCCGGTGAGGAGAAGAAGGAAGAAAAAGCAGAGGAGAAGCCGCCGGAG AACAAGCAAGACGGAGAGAAGAAGGAAGATAAAGCTGAAGAGGGGAAGAAAGAAGAGGAAAAGAAGGAAGACGATAATAA ACCAAAAGAAGATTCCAAGGAAGAAGAAAAACCAAAGACAGAGGAAGCAAAATCAAAGGAAGAGGTACCAGCGGAGAAAA CGCCAACGCCAACGCCAGCACCGCCCCCTGCGGAGGTAGTGAATCCGCCGATTGCTGAGGCGGAGAAGCCGAAGATGAAG GAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCACGAGCTCCGATCCGATCGGAGTCGCAGCGC CAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGCAAAGCTTGCAAATCCAGAACCTGATTCCG CAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTGAGTGTGAGGGCAAAGATTGGGATCAGGTT TTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTGTTCTCTGAGAAGGGTAAAGAAGGGAGCGA TGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAGAGTTCCACCGGATAGTCCTCTGGCTCCAC AGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTGCCGTATGGATCGGGACTCAGGCAGATGAG GCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACACGAGCCAAGGTGTATCTTTCACCCAAACT TTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTCGGGATGCGAGCCTAAGGTTCGGAATCCCG AGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAACCTCCCCAGGCTCAGCTAACCCAACGTGG AACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTTGTAACGGTAGAAGACGTGTCAAATTCAAA GCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGACGATCGAACGGACCTAAAGTCCAGATGGT TCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATGTTCGTGTTTGCTTGGAAGGTGGGTATCAC GTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAACAACTCCACAAGCCTCCAATCGGTTTGCT AGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGACGGGACACGTGGCACCACCGATGCCTATG TGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACCGGTTCAACCCGCGGTGGAACGAGCAGTAT ACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGACAATGGAAGATACTGCAAAAACAGCAACAG AGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAACCGTGTATACTTGAACTCCTATTCGTTAA CGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAGTGAGATTCTCATGCTCTTCGTGGTTGAGC TTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGCCCATTCGGCCCAACCCAACAAGATGTCCT GCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACCGCCTCTGGGTCAGGAAGTGGTTCAGTTCA TGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACTGGTTCAGGGTGGTGGGTTGTTTGTCACGC GCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCTCCCACGACGGTTTTAGTCCACGTGCTGCT CGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTATGCGTTCTTGGTTTTGCTACTGAGATTCC GGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGGACATGGTGAGCCTGGACGAGCTGGACGAG GAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGGTACGATAGGGTGCGGGCGCTTGCGGGGAG GGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGCATTGTTTAGTTGGCGGGACCCACGGGCCA CTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGGTGCCGTTTAAGGGTTTTGTGCTGGGGGCT GGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATCTCTGCTAACTTTTTCCGGCGACTTCCGTC ATATTCCGATCAGATTATGTGA
CDS sequence (LotjaGi2g1v0110400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCACGAGCTCCGATCCGATCGGAGTCG CAGCGCCAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGCAAAGCTTGCAAATCCAGAACCTG ATTCCGCAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTGAGTGTGAGGGCAAAGATTGGGAT CAGGTTTTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTGTTCTCTGAGAAGGGTAAAGAAGG GAGCGATGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAGAGTTCCACCGGATAGTCCTCTGG CTCCACAGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTGCCGTATGGATCGGGACTCAGGCA GATGAGGCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACACGAGCCAAGGTGTATCTTTCACC CAAACTTTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTCGGGATGCGAGCCTAAGGTTCGGA ATCCCGAGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAACCTCCCCAGGCTCAGCTAACCCA ACGTGGAACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTTGTAACGGTAGAAGACGTGTCAAA TTCAAAGCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGACGATCGAACGGACCTAAAGTCCA GATGGTTCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATGTTCGTGTTTGCTTGGAAGGTGGG TATCACGTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAACAACTCCACAAGCCTCCAATCGG TTTGCTAGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGACGGGACACGTGGCACCACCGATG CCTATGTGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACCGGTTCAACCCGCGGTGGAACGAG CAGTATACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGACAATGGAAGATACTGCAAAAACAG CAACAGAGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAACCGTGTATACTTGAACTCCTATT CGTTAACGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAGTGAGATTCTCATGCTCTTCGTGG TTGAGCTTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGCCCATTCGGCCCAACCCAACAAGA TGTCCTGCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACCGCCTCTGGGTCAGGAAGTGGTTC AGTTCATGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACTGGTTCAGGGTGGTGGGTTGTTTG TCACGCGCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCTCCCACGACGGTTTTAGTCCACGT GCTGCTCGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTATGCGTTCTTGGTTTTGCTACTGA GATTCCGGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGGACATGGTGAGCCTGGACGAGCTG GACGAGGAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGGTACGATAGGGTGCGGGCGCTTGC GGGGAGGGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGCATTGTTTAGTTGGCGGGACCCAC GGGCCACTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGGTGCCGTTTAAGGGTTTTGTGCTG GGGGCTGGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATCTCTGCTAACTTTTTCCGGCGACT TCCGTCATATTCCGATCAGATTATGTGA
Protein sequence (LotjaGi2g1v0110400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEKHGALQKRADLKVSDHELRSDRSRSANDLVDRMPFLYIRVVKAKLANPEPDSAIFSKLVIGTHTIRTKSECEGKDWD QVFAFDKEGLNSTSLEVSLFSEKGKEGSDEKSLGTVSFDLQEVPKRVPPDSPLAPQWYTLESDSSPGNDVMLAVWIGTQA DEAFQEAWQSDSGGLIPETRAKVYLSPKLWYLRLTVIQTQDLQLGSGCEPKVRNPEFYVKAQLGAQVFKTGRTSPGSANP TWNEDLVFVAAEPFEPFLVVTVEDVSNSKPVGQAKIHVSSIERRTDDRTDLKSRWFNLSGEDENHSYTGRIHVRVCLEGG YHVIDEAAHVTSDARAAAKQLHKPPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIMDRFNPRWNE QYTWDVHDPCTVLTIGVFDNGRYCKNSNRDVRMGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKRMGEIEIAVRFSCSSW LSLMQAYASPILPRMHYVRPFGPTQQDVLRQTAMRIVTARLSRSEPPLGQEVVQFMLDSDTHVWSMRRSKANWFRVVGCL SRAATVLRWVDGIRMWTHPPTTVLVHVLLVAVVLCPYLVVPTVFMYAFLVLLLRFRYRSRALHSMDPRMSYVDMVSLDEL DEEFDGFPTTRSAEHVRIRYDRVRALAGRAQTLLGDVAAQGERLEALFSWRDPRATGIFAVLCLVASLVFYAVPFKGFVL GAGFFYLRHPRFRDDMPSISANFFRRLPSYSDQIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 582 | 582 | - | – | |
| PANTHER | 15 | 755 | 741 | 0.0 | – | |
| PANTHER | 15 | 755 | 741 | 0.0 | – | |
| Gene3D | 34 | 156 | 123 | 6.8E-6 | ||
| SMART | 38 | 132 | 95 | 12.0 | ||
| Pfam | 39 | 138 | 100 | 0.006 | ||
| SUPERFAMILY | 39 | 172 | 134 | 4.68E-10 | – | |
| Gene3D | 178 | 318 | 141 | 2.1E-18 | ||
| SUPERFAMILY | 190 | 337 | 148 | 4.46E-23 | – | |
| Pfam | 190 | 298 | 109 | 1.9E-15 | ||
| CDD | 191 | 336 | 146 | 1.0953E-58 | – | |
| SMART | 191 | 290 | 100 | 2.8E-6 | ||
| ProSiteProfiles | 192 | 275 | 84 | 8.606 | ||
| Gene3D | 328 | 477 | 150 | 4.7E-23 | ||
| SUPERFAMILY | 347 | 484 | 138 | 1.71E-24 | – | |
| Pfam | 347 | 455 | 109 | 1.4E-21 | ||
| CDD | 348 | 472 | 125 | 4.21637E-56 | – | |
| SMART | 348 | 452 | 105 | 1.4E-13 | ||
| ProSiteProfiles | 349 | 437 | 89 | 10.782 | ||
| TMHMM | 582 | 613 | 32 | - | – | |
| Phobius | 583 | 613 | 31 | - | – | |
| Pfam | 600 | 755 | 156 | 6.1E-67 | ||
| Phobius | 614 | 697 | 84 | - | – | |
| TMHMM | 698 | 720 | 23 | - | – | |
| Phobius | 698 | 727 | 30 | - | – | |
| Phobius | 728 | 755 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0110400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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