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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0110400 |
| Transcript ID | LotjaGi2g1v0110400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|I1MVS7|I1MVS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:39569349..39572330) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAAGATTCTGGAAGGAAGCTCGTGGTGGAGGTTTGCGATGCGAAGAACTTGATGCCGAAAGACGGCCAAGGAAC CGCGAGCGCTTACGCGATCGTGGATTTCGACAGCCAGAGACGGCGAACTACGACAAAATCGAGAGATCTCAATCCTCAGT GGAACGAGAAGCTCGAGTTCATGGTTCACGACAAAGAGTCCATGCCTTCGGAAACGCTAGAGGTCAATCTCTACAACGAC AAGAAAGCAGGTAAGAGAAGCACTTTTCTCGGCAAGGTAAAAATATCCGGAAGTACTTTCTCCAAGTCTGGTTCCGAGGA GATTGTGTACTATCCGTTGGAGAAAAGGAGCGTTTTCTCTCAGATCAAAGGGGAACTCGGCCTGAAAGTTTGTTTCGTCG ATAACGATCCACCACCAGCTACCACCGAAGCCGCCGGTGAGGAGAAGAAGGAAGAAAAAGCAGAGGAGAAGCCGCCGGAG AACAAGCAAGACGGAGAGAAGAAGGAAGATAAAGCTGAAGAGGGGAAGAAAGAAGAGGAAAAGAAGGAAGACGATAATAA ACCAAAAGAAGATTCCAAGGAAGAAGAAAAACCAAAGACAGAGGAAGCAAAATCAAAGGAAGAGGTACCAGCGGAGAAAA CGCCAACGCCAACGCCAGCACCGCCCCCTGCGGAGGTAGTGAATCCGCCGATTGCTGAGGCGGAGAAGCCGAAGATGAAG GAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCACGAGCTCCGATCCGATCGGAGTCGCAGCGC CAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGCAAAGCTTGCAAATCCAGAACCTGATTCCG CAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTGAGTGTGAGGGCAAAGATTGGGATCAGGTT TTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTGTTCTCTGAGAAGGGTAAAGAAGGGAGCGA TGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAGAGTTCCACCGGATAGTCCTCTGGCTCCAC AGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTGCCGTATGGATCGGGACTCAGGCAGATGAG GCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACACGAGCCAAGGTGTATCTTTCACCCAAACT TTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTCGGGATGCGAGCCTAAGGTTCGGAATCCCG AGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAACCTCCCCAGGCTCAGCTAACCCAACGTGG AACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTTGTAACGGTAGAAGACGTGTCAAATTCAAA GCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGACGATCGAACGGACCTAAAGTCCAGATGGT TCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATGTTCGTGTTTGCTTGGAAGGTGGGTATCAC GTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAACAACTCCACAAGCCTCCAATCGGTTTGCT AGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGACGGGACACGTGGCACCACCGATGCCTATG TGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACCGGTTCAACCCGCGGTGGAACGAGCAGTAT ACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGACAATGGAAGATACTGCAAAAACAGCAACAG AGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAACCGTGTATACTTGAACTCCTATTCGTTAA CGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAGTGAGATTCTCATGCTCTTCGTGGTTGAGC TTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGCCCATTCGGCCCAACCCAACAAGATGTCCT GCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACCGCCTCTGGGTCAGGAAGTGGTTCAGTTCA TGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACTGGTTCAGGGTGGTGGGTTGTTTGTCACGC GCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCTCCCACGACGGTTTTAGTCCACGTGCTGCT CGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTATGCGTTCTTGGTTTTGCTACTGAGATTCC GGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGGACATGGTGAGCCTGGACGAGCTGGACGAG GAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGGTACGATAGGGTGCGGGCGCTTGCGGGGAG GGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGCATTGTTTAGTTGGCGGGACCCACGGGCCA CTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGGTGCCGTTTAAGGGTTTTGTGCTGGGGGCT GGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATCTCTGCTAACTTTTTCCGGCGACTTCCGTC ATATTCCGATCAGATTATGTGA
CDS sequence (LotjaGi2g1v0110400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGATTCTGGAAGGAAGCTCGTGGTGGAGGTTTGCGATGCGAAGAACTTGATGCCGAAAGACGGCCAAGGAAC CGCGAGCGCTTACGCGATCGTGGATTTCGACAGCCAGAGACGGCGAACTACGACAAAATCGAGAGATCTCAATCCTCAGT GGAACGAGAAGCTCGAGTTCATGGTTCACGACAAAGAGTCCATGCCTTCGGAAACGCTAGAGGTCAATCTCTACAACGAC AAGAAAGCAGGTAAGAGAAGCACTTTTCTCGGCAAGGTAAAAATATCCGGAAGTACTTTCTCCAAGTCTGGTTCCGAGGA GATTGTGTACTATCCGTTGGAGAAAAGGAGCGTTTTCTCTCAGATCAAAGGGGAACTCGGCCTGAAAGTTTGTTTCGTCG ATAACGATCCACCACCAGCTACCACCGAAGCCGCCGGTGAGGAGAAGAAGGAAGAAAAAGCAGAGGAGAAGCCGCCGGAG AACAAGCAAGACGGAGAGAAGAAGGAAGATAAAGCTGAAGAGGGGAAGAAAGAAGAGGAAAAGAAGGAAGACGATAATAA ACCAAAAGAAGATTCCAAGGAAGAAGAAAAACCAAAGACAGAGGAAGCACCGCCCCCTGCGGAGGTAGTGAATCCGCCGA TTGCTGAGGCGGAGAAGCCGAAGATGAAGGAAAAGCACGGAGCTCTGCAAAAACGTGCTGATCTGAAAGTGAGTGACCAC GAGCTCCGATCCGATCGGAGTCGCAGCGCCAACGATCTTGTGGACCGCATGCCGTTTCTCTACATTCGCGTGGTTAAGGC AAAGCTTGCAAATCCAGAACCTGATTCCGCAATTTTCTCAAAACTTGTAATTGGTACTCACACAATCAGGACCAAGAGTG AGTGTGAGGGCAAAGATTGGGATCAGGTTTTCGCATTTGACAAAGAAGGCCTCAATTCAACCTCCTTGGAAGTTTCCTTG TTCTCTGAGAAGGGTAAAGAAGGGAGCGATGAGAAGAGCCTCGGAACGGTGTCCTTTGACCTGCAGGAGGTTCCTAAGAG AGTTCCACCGGATAGTCCTCTGGCTCCACAGTGGTACACTCTAGAATCTGACTCCTCGCCGGGAAATGACGTCATGCTTG CCGTATGGATCGGGACTCAGGCAGATGAGGCGTTTCAGGAGGCTTGGCAATCAGATTCCGGCGGGTTGATACCGGAGACA CGAGCCAAGGTGTATCTTTCACCCAAACTTTGGTATCTGAGACTAACGGTTATCCAGACCCAGGACTTGCAGCTAGGTTC GGGATGCGAGCCTAAGGTTCGGAATCCCGAGTTTTACGTAAAGGCTCAGCTCGGCGCGCAGGTTTTCAAAACAGGCAGAA CCTCCCCAGGCTCAGCTAACCCAACGTGGAACGAGGACCTCGTGTTTGTAGCCGCAGAGCCGTTTGAGCCGTTTCTAGTT GTAACGGTAGAAGACGTGTCAAATTCAAAGCCAGTGGGCCAGGCAAAGATCCACGTGTCATCCATCGAGCGTAGGACAGA CGATCGAACGGACCTAAAGTCCAGATGGTTCAACCTTTCCGGCGAAGACGAGAACCATTCATACACCGGTAGAATCCATG TTCGTGTTTGCTTGGAAGGTGGGTATCACGTGATAGATGAAGCAGCTCACGTGACAAGCGACGCGCGTGCCGCGGCGAAA CAACTCCACAAGCCTCCAATCGGTTTGCTAGAGGTGGGGATTCGCGGCGCCACCAACCTCCTCCCCGTGAAGACCAAGGA CGGGACACGTGGCACCACCGATGCCTATGTGGTGGCGAAATACGGGCCCAAGTGGGTCCGAACCAGAACCATAATGGACC GGTTCAACCCGCGGTGGAACGAGCAGTATACTTGGGATGTGCACGACCCTTGCACGGTGCTCACAATTGGTGTGTTCGAC AATGGAAGATACTGCAAAAACAGCAACAGAGACGTTAGGATGGGGAAAATTCGTGTGCGGTTGTCCACACTGGACACCAA CCGTGTATACTTGAACTCCTATTCGTTAACGGTTTTGCTGCCAGGTGGCGCGAAGAGAATGGGGGAGATAGAGATTGCAG TGAGATTCTCATGCTCTTCGTGGTTGAGCTTAATGCAGGCCTACGCAAGCCCAATTCTTCCCAGGATGCACTACGTGCGC CCATTCGGCCCAACCCAACAAGATGTCCTGCGCCAAACAGCCATGAGGATCGTGACGGCTCGTCTCAGCCGGTCTGAACC GCCTCTGGGTCAGGAAGTGGTTCAGTTCATGCTGGATTCTGATACACACGTGTGGAGCATGCGGCGGAGCAAGGCGAACT GGTTCAGGGTGGTGGGTTGTTTGTCACGCGCGGCGACGGTGCTGCGTTGGGTGGACGGGATTCGCATGTGGACCCACCCT CCCACGACGGTTTTAGTCCACGTGCTGCTCGTGGCGGTGGTGTTGTGCCCTTACCTGGTGGTCCCCACGGTGTTCATGTA TGCGTTCTTGGTTTTGCTACTGAGATTCCGGTACCGATCACGGGCCCTACACAGCATGGATCCGAGGATGTCGTACGTGG ACATGGTGAGCCTGGACGAGCTGGACGAGGAGTTTGATGGGTTCCCCACGACGCGGTCCGCGGAGCATGTTCGAATCAGG TACGATAGGGTGCGGGCGCTTGCGGGGAGGGCGCAGACATTGTTGGGTGACGTGGCGGCACAGGGGGAGCGGTTGGAGGC ATTGTTTAGTTGGCGGGACCCACGGGCCACTGGGATATTCGCGGTGCTGTGTTTGGTAGCGTCGTTGGTGTTCTACGCGG TGCCGTTTAAGGGTTTTGTGCTGGGGGCTGGGTTCTTCTACCTGCGACACCCGAGGTTCCGCGACGACATGCCGTCTATC TCTGCTAACTTTTTCCGGCGACTTCCGTCATATTCCGATCAGATTATGTGA
Protein sequence (LotjaGi2g1v0110400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEDSGRKLVVEVCDAKNLMPKDGQGTASAYAIVDFDSQRRRTTTKSRDLNPQWNEKLEFMVHDKESMPSETLEVNLYND KKAGKRSTFLGKVKISGSTFSKSGSEEIVYYPLEKRSVFSQIKGELGLKVCFVDNDPPPATTEAAGEEKKEEKAEEKPPE NKQDGEKKEDKAEEGKKEEEKKEDDNKPKEDSKEEEKPKTEEAPPPAEVVNPPIAEAEKPKMKEKHGALQKRADLKVSDH ELRSDRSRSANDLVDRMPFLYIRVVKAKLANPEPDSAIFSKLVIGTHTIRTKSECEGKDWDQVFAFDKEGLNSTSLEVSL FSEKGKEGSDEKSLGTVSFDLQEVPKRVPPDSPLAPQWYTLESDSSPGNDVMLAVWIGTQADEAFQEAWQSDSGGLIPET RAKVYLSPKLWYLRLTVIQTQDLQLGSGCEPKVRNPEFYVKAQLGAQVFKTGRTSPGSANPTWNEDLVFVAAEPFEPFLV VTVEDVSNSKPVGQAKIHVSSIERRTDDRTDLKSRWFNLSGEDENHSYTGRIHVRVCLEGGYHVIDEAAHVTSDARAAAK QLHKPPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIMDRFNPRWNEQYTWDVHDPCTVLTIGVFD NGRYCKNSNRDVRMGKIRVRLSTLDTNRVYLNSYSLTVLLPGGAKRMGEIEIAVRFSCSSWLSLMQAYASPILPRMHYVR PFGPTQQDVLRQTAMRIVTARLSRSEPPLGQEVVQFMLDSDTHVWSMRRSKANWFRVVGCLSRAATVLRWVDGIRMWTHP PTTVLVHVLLVAVVLCPYLVVPTVFMYAFLVLLLRFRYRSRALHSMDPRMSYVDMVSLDELDEEFDGFPTTRSAEHVRIR YDRVRALAGRAQTLLGDVAAQGERLEALFSWRDPRATGIFAVLCLVASLVFYAVPFKGFVLGAGFFYLRHPRFRDDMPSI SANFFRRLPSYSDQIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 803 | 803 | - | – | |
| Gene3D | 3 | 203 | 201 | 4.9E-26 | ||
| PANTHER | 6 | 976 | 971 | 0.0 | – | |
| PANTHER | 6 | 976 | 971 | 0.0 | – | |
| CDD | 8 | 130 | 123 | 1.13164E-57 | – | |
| SMART | 8 | 109 | 102 | 5.8E-12 | ||
| Pfam | 8 | 106 | 99 | 2.0E-18 | ||
| ProSiteProfiles | 8 | 94 | 87 | 12.647 | ||
| SUPERFAMILY | 8 | 141 | 134 | 3.99E-25 | – | |
| MobiDBLite | 133 | 246 | 114 | - | – | |
| MobiDBLite | 143 | 203 | 61 | - | – | |
| Coils | 162 | 182 | 21 | - | – | |
| MobiDBLite | 217 | 246 | 30 | - | – | |
| Gene3D | 255 | 377 | 123 | 9.8E-6 | ||
| SMART | 259 | 353 | 95 | 12.0 | ||
| SUPERFAMILY | 260 | 393 | 134 | 6.86E-10 | – | |
| Pfam | 260 | 359 | 100 | 0.0085 | ||
| Gene3D | 399 | 539 | 141 | 3.1E-18 | ||
| SUPERFAMILY | 411 | 558 | 148 | 6.26E-23 | – | |
| Pfam | 411 | 518 | 108 | 2.7E-15 | ||
| SMART | 412 | 511 | 100 | 2.8E-6 | ||
| CDD | 412 | 557 | 146 | 5.47347E-58 | – | |
| ProSiteProfiles | 413 | 496 | 84 | 8.606 | ||
| Gene3D | 549 | 698 | 150 | 6.9E-23 | ||
| SUPERFAMILY | 568 | 705 | 138 | 2.65E-24 | – | |
| Pfam | 569 | 676 | 108 | 2.0E-21 | ||
| CDD | 569 | 693 | 125 | 8.90236E-56 | – | |
| SMART | 569 | 673 | 105 | 1.4E-13 | ||
| ProSiteProfiles | 570 | 658 | 89 | 10.782 | ||
| TMHMM | 803 | 834 | 32 | - | – | |
| Phobius | 804 | 834 | 31 | - | – | |
| Pfam | 821 | 976 | 156 | 9.1E-67 | ||
| Phobius | 835 | 918 | 84 | - | – | |
| TMHMM | 919 | 941 | 23 | - | – | |
| Phobius | 919 | 948 | 30 | - | – | |
| Phobius | 949 | 976 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0110400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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