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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0119500 |
| Transcript ID | LotjaGi2g1v0119500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TatD family; TAIR: AT5G17570.1 TatD related DNase; Swiss-Prot: sp|P37545|YABD_BACSU Uncharacterized metal-dependent hydrolase YabD; TrEMBL-Plants: tr|A0A0S3T987|A0A0S3T987_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0119500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43804088..43807268) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGAAACTGTTCGACGCACACTGTCATCTGCAGGACCCAAGAATCCTAAGCAAAGCACATCAACTCATCAAAACTGC CCAAGACAAAGGGGTTGCCCGCTTCGCCGTGAACGGAGTTTGCGAACAAGATTGGCACTTGGTGAAAAACTTGGCTGAGA CCTACCCTTGTGTCATTCCTTGCTTTGGTCTCCATCCCTGGTATGTTGCTGAGAGGAGTCCCGATTGGTTTAAGACGTTG AAAGATTATTTCGATTCTACTCCCTCTGCTGCAGTTGGAGAGGTATTTTATTTCTATCTTCTATTAGCTTTTCATTCTAT TGCTTTGTGTTTTTTTTAATAGGCAAATGTTATTTGTTAGTAATGTTAGTAAGTTAGTTCCTCAAGTTTCGAACCCTGGA CCCTTCATCACACCCAACTCTTATGTCCCCTAGCTCTTCTAGCGTGGAACACTACTGAATATGTGTGCTTAACTCAACAT TAGATGCAATTGAGTTATTTATTTCATTTTATTTTTTCTCAGATTGGCGTTGACAAAGGATCACAAGGAAGGAAGATTGA TTTTTCTGAGCAGGTTTGAGCTCCCAATTTTACTTTTTGGGCTATGCAATGCATTTTCCTGTTAATATTTAGAAGCTCTG ATAATTTCTTTTGGTGCAACAAGAAGATGCACCTATTTCTCTTTCTATTTATTTTATATGCATATACCATGATCCAACAC TTCTGTCATTGGTGTTACCAATTCTCAAAGAGTTTGATAGGTTGTTAAATTTAGCATTACTGCAAGTATTACACTTTGAT GGATTGGAAGAGAAGGTTTTTTGATAGTGAAGTATTGATTGAATAGCCCTTTCACTTGATATTTTGGGCTGATGCTGTGT TGGTAATTTACATGTTTTATACTTTTATGTGAGAAGAACAAATTTTTTAATGTACTCTCACAAATGCGAGAAGATGCTTG TGAGTATTATTGGTTGGTACCATTGTCTGTCTGTCAGCATTTATTGCCTCGCCCTCAACAACTGTCTAAATTTTCAAAGA CTGATAAAAAACATAGCATTTTAGGCTTCAAAACAAGGCTGACTAGAATTTGTCAAGGAACACCGTTTCTTCTTGATATA GATTGTTATACTCAGATTATTAGAAATTTTGTTTTTGTTTGTTAGGCTAAAGCTAAAGTAGTACATAGAAGGGTTCAAGT TCAGTTCAGTCCCATGTTAAAGGATGGCTTCACATTCTTTTGCATGTCATTTGTGCAGGTTGAAGTATTGACACAGCAGC TTGAACTTGCGAAAGAGTTAAACAAACCAGCATCTATACACTGTGTTCGTGCTTTTGGTGACCTTCTTGAGTTAATGAAG TATGCATACCTATTATTATCTCTTTTGTTCAATTGTTACCTTAGAAAGATTGCTTAAAAACAATGATGATTTAATTTTTT CTTTGAAATGTTAAACACCCTTGCAGTAGTAGTGTGGTGATCAAAAAGAGAATTTCTCACAAGGAATAGTGAAGAGAACA ACCAATTTTTTGTCTGAACTCTGAAGACATACTCCAAATAAGTTGCTTGAATGCAAACAAGATGAACCTTTTTCTTTCAA TAATGAATTCCTAATTGAAGCTTCTGACCATTTCTTGATGAATAATCAAATACGAAGGTATCACTACAGAATGATGATGT ATAATGATAATGTAGAGTTTGTGATATAGGGCTTAACAATAAGAGCCACTCATAAAATCATTGTTTAAGATTTCTCAGTC ATAAGTTGGGTCTTCGGTTGCACACCTAAGTCAACCTGTATATCTGTTGAGACAAAGCTGGCTAAGGACTAGATAACCAT AGAAACCAAAAATGCAGAAAAATTGTGAGGAAATAGTTAGCAAATGAGAAGGAACTTTAGAGCCTTCTGTAATAAACCAA TATCCTTGGTATTGAAGTAAAAATGCCAATATGGAACTGTTAGAATTTGGGAGGCCTAACTCAACCCAAAAGCTAGCTCA AGAGTTGAGGATTTCTTTCCCATAAATAAGGGCTATATTGGCTATATCTCTAGTCAATTTGAGACTTCTCAACAGTAACA AAAGCTTAGTAATTGAGTATTCAAAGCTGCATAAAGTTCCGTATTATGAATCATTTTTACCTTATGTCGTTTCATGAAAA TTAGAAAAAGCAAGGTATGCTTTTGCATATAGAAGAAGACTGCTTACTACGAGGACTGTTAGTCTGTCAACATAGTGCAG ACACATAACCAACAATTGTGAAGAAGGAAGAAACATTCTGAAGAAGTTGGAATTCTGTTCAAATCTTTTAAGATCCCTCG TAATCACAATTTGGTGTGTTCCCTCGAAAGTAGTACTGTGTTAGAGTTTCATTGATGTAATATGATTACTCATTAGGTTC TTACAGAAGAGTACCGTATGCTTTTTTCTGATATTTGATAACATGGACTCTTATTGTTAACATGGTTATATCCTCATTAT CTAATGGCGTTCCTTTGAATTAAGCCTTATAGTGATTTCTCGTTGATTGTTACAGTATGGTGTCTTTGAAATTACTGTCT CCCTAATTTCAATATTTCCAGGTCTGTAGGACCTTTTCCTGCTGGTGTTATTCTTCATTCTTACCTAGGTTCTGCTGAGA TGGTTCCTGAATTTTCCAAGCTTGGTGCTTATTTTTCTTTCTCTGGATTTCTTATGTCACTAAAAGCTAATAAGGCAAAG AAAATGCTGAAGATGGTGATTTTCATCTTTTCTGTTACATGCATGTTCGATGTAATTTTACACTACGTGCCAAAACACTT ACATTCTTAATTTATATTCTATCCAGGTCCCTTCTGATAGGATTTTATTGGAGACTGATGCACCTGATGCACTACCGAAG TCAAACATAGATTCTCTTCTTTTCGTTGAAGGAGATGCATCTCTTTCTGAAGAGTTTCAAGCCCAGAGAACAACTTCATC CTCGACTTCTGCTTCTTCTTCCAATAATGCATCCCATGTCTTAAAAGATGTTTCCATGTTGCCAAAGGAAACACTCAATC ATCCAGCAAACATTCGAAATGTATGTAGCTCAAGTAATCGCCTTCATTGTTGCCTCGTGTTTACAAAATTAGCATCTCTT ATTATATCATTCTTTCGGAGATATATCATAATATTTCTAATTAGAGTACACAAAATTCTGA
CDS sequence (LotjaGi2g1v0119500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAACTGTTCGACGCACACTGTCATCTGCAGGACCCAAGAATCCTAAGCAAAGCACATCAACTCATCAAAACTGC CCAAGACAAAGGGGTTGCCCGCTTCGCCGTGAACGGAGTTTGCGAACAAGATTGGCACTTGGTGAAAAACTTGGCTGAGA CCTACCCTTGTGTCATTCCTTGCTTTGGTCTCCATCCCTGGTATGTTGCTGAGAGGAGTCCCGATTGGTTTAAGACGTTG AAAGATTATTTCGATTCTACTCCCTCTGCTGCAGTTGGAGAGATTGGCGTTGACAAAGGATCACAAGGAAGGAAGATTGA TTTTTCTGAGCAGGTTGAAGTATTGACACAGCAGCTTGAACTTGCGAAAGAGTTAAACAAACCAGCATCTATACACTGTG TTCGTGCTTTTGGTGACCTTCTTGAGTTAATGAAGTCTGTAGGACCTTTTCCTGCTGGTGTTATTCTTCATTCTTACCTA GGTTCTGCTGAGATGGTTCCTGAATTTTCCAAGCTTGGTGCTTATTTTTCTTTCTCTGGATTTCTTATGTCACTAAAAGC TAATAAGGCAAAGAAAATGCTGAAGATGGTCCCTTCTGATAGGATTTTATTGGAGACTGATGCACCTGATGCACTACCGA AGTCAAACATAGATTCTCTTCTTTTCGTTGAAGGAGATGCATCTCTTTCTGAAGAGTTTCAAGCCCAGAGAACAACTTCA TCCTCGACTTCTGCTTCTTCTTCCAATAATGCATCCCATGTCTTAAAAGATGTTTCCATGTTGCCAAAGGAAACACTCAA TCATCCAGCAAACATTCGAAATGTATGTAGCTCAAAGTACACAAAATTCTGA
Protein sequence (LotjaGi2g1v0119500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKLFDAHCHLQDPRILSKAHQLIKTAQDKGVARFAVNGVCEQDWHLVKNLAETYPCVIPCFGLHPWYVAERSPDWFKTL KDYFDSTPSAAVGEIGVDKGSQGRKIDFSEQVEVLTQQLELAKELNKPASIHCVRAFGDLLELMKSVGPFPAGVILHSYL GSAEMVPEFSKLGAYFSFSGFLMSLKANKAKKMLKMVPSDRILLETDAPDALPKSNIDSLLFVEGDASLSEEFQAQRTTS SSTSASSSNNASHVLKDVSMLPKETLNHPANIRNVCSSKYTKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 255 | 255 | 3.2E-58 | – | |
| PANTHER | 1 | 276 | 276 | 5.7E-122 | – | |
| PANTHER | 1 | 276 | 276 | 5.7E-122 | – | |
| PIRSF | 1 | 279 | 279 | 1.1E-49 | ||
| SUPERFAMILY | 1 | 215 | 215 | 3.3E-59 | ||
| CDD | 4 | 214 | 211 | 1.49863E-67 | ||
| Pfam | 5 | 275 | 271 | 1.1E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi2g1v0119500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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