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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0120500 |
| Transcript ID | LotjaGi2g1v0120500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase-like protein; TAIR: AT1G03520.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9LFQ0|GT14B_ARATH Beta-glucuronosyltransferase GlcAT14B; TrEMBL-Plants: tr|V7AIF6|V7AIF6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0120500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:44337989..44341602) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGGTAAAGTACACACTCCGTTTAGTGACAGGAAGGATGTTTAGTGACAGGAAGTGGATTATCCCGTTTTTCGCAAGT TTGCTTGTATCTGTGAGTCTGCTTCTCACATCTTTTCTTGGGGTGCTTAGTTCTGCTGGTGGTGGGGGAGAGCAGGCACC ATTTGACATTATTTCATTCAAGAGATCAGAAGATTCCAGTGGATATTTTGTAGAATCAGATTTGGATAATTCTCTCAATG TTAGTGTGATGGTGAAAAAAGAAGCACCTAGGTTTGCATATCTTATTTCAGGCACAAAGGGTGATAGTCATAGGTTGATG AGGACATTAGAGGCAGTGTATCATCCAAGGAATCAATACATCTTGCATTTGGATCTTGAGGCGCTGCCCCGGGAAAGGTT GGAATTGGCAAATACAGTGAAAGCAGATCCAGTATTTCGTGAAGTAGAGAATGTGCGTGTTATGTCTCAATCCAATTTGG TAACTTATAAGGGTCCTACAATGATTGCTTGTACTCTGCAAGCTATTGCAATACTATTGAAGGAGAGTTCAGAGTGGGAC TGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTCGTAACACAGGTTGGTAAGTAAATGACCTTTTCTCTGCTTCTTAA TGTAATATGTTATTATTCATGTAATAATGCTTGCATAAACTATGGCCTTCTAGGTTGTGGAAGGATAAGTACCCTTTACA AGCTGTCCTTCAGGTTTAAAGACATGATGTTTAAGCCATACATCGTAGCATGTGGTTGACTTGTTTCCCTTGAGCACTAA CCTATTGTTTTGAGGGTAGAAACGATTATTAAATTAGGCATTTAATGTTTTAGGGACAGGAAAGTTTATTAAAGTTCATA CATCCCTTGATTATTGTCTAGGTTTCAAGACGGGTCTCTATCTAACATCATTAGTTTTGTTTAAAGTTTAAACAACCAAT GATTGAATTAATTGGTTATATAGTCTCGAAATGTTTTGTTGTTTTTTCCCTTTTCATGTATGTTGTCTTCTTCAATAGTA GAAGGTTAGCAAATGAAATTGGGGTTGAGGCCTTTAGCTATGAACTAAGTTTGTTTATCAGGTTTGTTGCCAAATTATTA TTTTGTTTATCTTTGTAATTCTATTGTTTGATAGTGATGCTTAGTTTAGTAAACTCTATCTAATCTTCGTTGGAATCTTC CGCCACAACCATTCTTGCCTAAAGCACAGTGATTTTCAATAATTCAGGGACGAGCCATGCTCCTGGAGTAATGATGTTAG TCGTTAGACATAAATTAGTTATGTCGTTTCACCTCTGATGTGCTTAGGTGTAACAAACAGTCTTAAAATATTATAGAGTC TATAGAATAGACCTTGACATTCTGCCATTCAGGCTATTTTGACACTGCACATGTTGCTACTGGCTTTGGTTTGTTGGTCG CCCTATTGCTCAGCAAATGCAATGTCCATTTGAATAACCCCCATAAATTAGCTTTGTCAAGATCTGTAAGACAACAATAA TAACTGAATCTTATCCCACTTGATGTCAAATTTTGAAGCCTTACTTTATTGAAGGCTTTTTTTGTATGCCTTTCCACCAA TACCATTCCATCCCTGTGTTTCTGCTAGAGTTCCCTCCAAGTGCATTTTATGTAGATATTTGAGAAGTTTGTCAAGATAT CAAGGTCAATTTTGTTGTTAATACCTGCTGAATCACATTCCTGAGCTAGAACTTCTAGCACAAGTGCTAAGCAAGATTTT TCATGATCTCCATACTACATCATATATTACATGGTGCTTCTTTCCATAAATTGTCGATTAATTTTCTGGATAGTCTAAAA CTTGTTTTCCACATAGATTTTTTGTATCTAGTACAAGTGGCCTCGTCTAAAGTGAGCTTATCTCTGAAATTAATAAAGAT ATATCCATCCTTGGTCCCCCAAAACTGAAGGGTAATGGCATCATTACTTGCTCGCTTCAAAAGTTCACTTTAGAGGGTTA TCTTTCAATCTAAGCAGTTGCTGATTCTTCTCAGAAATCACAGCTTCAATAATGGATATATGTGGGACACATAATATGAG TCAGATTAGGTTTATTCTAGGGGAAAAAAACTACTGCTGTAAATGACGGTGAAGTATGGGCTGGATTAGAGTGTTAAACG ATAGTTGTCCCTCTGAAGTATGTTGATTAAATACATACTACAAGTCTAAACTTGTGATGTGTTGTCAAGTGTAAACTGAT ATAAGTTTTGATACCAATGAAATTTCTAGCTCTTGCGTAGCTAGTTGCTTGGGGTACTTTGTATTCAATAATTTGAGTCT TCTCGTATCAGCGTCTTCTTTGCTGCAGATATACTTATTTTATAACTTTTACCATAATCAATCTTCATATAGCTCATTTC ATGGTTTTTGGAGTATGCTTTTAATTGTATTACATGTATATATCAAGTCAAACATGCATGAAGTCTAGATTCTCTGTGAA GTCTCTACTCACTTTATATTTGTTTCCTGCTTTTGCAGATTTGCTTCATGTTTTCACGAATTTATCTATAGATCGCAATT TCATTGAACATACACGTTTTACTGGTTGGAAACTGTAAGTGAAAATTGTTATTAAGTGTGGCTTTTTTTCCTGTTTGCTA TATCATTTGATTAAGATTTCTTTGTGTTACTGCATATGTGTTCACGAACCAGAGAGCAAAACCAATCATTGTTGATCCTG CCCTTTACTTATCAAAGAAATCTGATTTAGCTTTCACTACTCAACGAAGAACACTTCCCACGGCTTTTAAACTGTTCACC GGTATGTCCGTATCTAAAATTTATTTTCTGCTATACATTCAAACTAAAAGGCCCTTTGAAGAGAGATAGCAGGGCCAAGA TTGTAGAATATCTTGTTGGCTTGCCAGATTATGAGCATGTTTGGATGCGGAGTAAAGAGCACTTATTGGAGCTTATCCAG TGCTTTTTTTAGTAAATAAGCTCCAAAGTGTTCTGTAGTTTGTATCCTAATGAGATGGATATTTGCTTGCTATTAGTTTT TTTTTATAGGCAACCAAGTCGAACATGGTAGATCCCTATACATTTTGCCTATGCTCTGTGAACAGGTTCAGCTTGGGTTG TGCTAACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCAAGGACTATGCTAATGTATTATACAAAC TTTGTCTCTTCGCCTGAGGGATATTTTCATACTGTTATTTGTAACACTAAGGAGTTCCGGCATACAGCGATTAGCCATGA TCTTCACTACATTGCTTGGGACAATCCCCCAAAGCAGCATCCAATGTCTTTGACTATGAAAGACTTCGAAAAAATGGTTA AGAGCAACGCTCCATTTGCCCGAAAGTTCGCGAAGGATGATCCAGTTCTCGACAAGATTGACAAAGAAGTTTTGGGTCGT ACACATAGATTTTCACATGGAGCATGGTGTGTTGGGACCTCAGATGGTGGTGCAGACCCTTGTTCTTTGCGTGGCAATGA TACAGTGTTTAGTCCAGGACCTGGTGCTGAGAGATTACATGAGCTGCTTCAAGTTCTGTTATCTGAAGAACTTCAAGGCA AGCAGTGTTTGTGA
CDS sequence (LotjaGi2g1v0120500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTAGTGACAGGAAGTGGATTATCCCGTTTTTCGCAAGTTTGCTTGTATCTGTGAGTCTGCTTCTCACATCTTTTCT TGGGGTGCTTAGTTCTGCTGGTGGTGGGGGAGAGCAGGCACCATTTGACATTATTTCATTCAAGAGATCAGAAGATTCCA GTGGATATTTTGTAGAATCAGATTTGGATAATTCTCTCAATGTTAGTGTGATGGTGAAAAAAGAAGCACCTAGGTTTGCA TATCTTATTTCAGGCACAAAGGGTGATAGTCATAGGTTGATGAGGACATTAGAGGCAGTGTATCATCCAAGGAATCAATA CATCTTGCATTTGGATCTTGAGGCGCTGCCCCGGGAAAGGTTGGAATTGGCAAATACAGTGAAAGCAGATCCAGTATTTC GTGAAGTAGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACAATGATTGCTTGTACTCTG CAAGCTATTGCAATACTATTGAAGGAGAGTTCAGAGTGGGACTGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTCGT AACACAGGTTGATTTGCTTCATGTTTTCACGAATTTATCTATAGATCGCAATTTCATTGAACATACACGTTTTACTGGTT GGAAACTGAACCAGAGAGCAAAACCAATCATTGTTGATCCTGCCCTTTACTTATCAAAGAAATCTGATTTAGCTTTCACT ACTCAACGAAGAACACTTCCCACGGCTTTTAAACTGTTCACCGGTTCAGCTTGGGTTGTGCTAACTCGGTCCTTTGTGGA GTACTGTATATGGGGATGGGATAACTTTCCAAGGACTATGCTAATGTATTATACAAACTTTGTCTCTTCGCCTGAGGGAT ATTTTCATACTGTTATTTGTAACACTAAGGAGTTCCGGCATACAGCGATTAGCCATGATCTTCACTACATTGCTTGGGAC AATCCCCCAAAGCAGCATCCAATGTCTTTGACTATGAAAGACTTCGAAAAAATGGTTAAGAGCAACGCTCCATTTGCCCG AAAGTTCGCGAAGGATGATCCAGTTCTCGACAAGATTGACAAAGAAGTTTTGGGTCGTACACATAGATTTTCACATGGAG CATGGTGTGTTGGGACCTCAGATGGTGGTGCAGACCCTTGTTCTTTGCGTGGCAATGATACAGTGTTTAGTCCAGGACCT GGTGCTGAGAGATTACATGAGCTGCTTCAAGTTCTGTTATCTGAAGAACTTCAAGGCAAGCAGTGTTTGTGA
Protein sequence (LotjaGi2g1v0120500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSDRKWIIPFFASLLVSVSLLLTSFLGVLSSAGGGGEQAPFDIISFKRSEDSSGYFVESDLDNSLNVSVMVKKEAPRFA YLISGTKGDSHRLMRTLEAVYHPRNQYILHLDLEALPRERLELANTVKADPVFREVENVRVMSQSNLVTYKGPTMIACTL QAIAILLKESSEWDWFINLSASDYPLVTQVDLLHVFTNLSIDRNFIEHTRFTGWKLNQRAKPIIVDPALYLSKKSDLAFT TQRRTLPTAFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTKEFRHTAISHDLHYIAWD NPPKQHPMSLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEVLGRTHRFSHGAWCVGTSDGGADPCSLRGNDTVFSPGP GAERLHELLQVLLSEELQGKQCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| PANTHER | 1 | 422 | 422 | 4.5E-242 | – | |
| PANTHER | 1 | 422 | 422 | 4.5E-242 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 11 | 30 | 20 | - | – | |
| Phobius | 31 | 35 | 5 | - | – | |
| Phobius | 36 | 423 | 388 | - | – | |
| Pfam | 79 | 338 | 260 | 2.1E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0120500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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