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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0122200 |
| Transcript ID | LotjaGi2g1v0122200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|I1MUN6|I1MUN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0122200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:44993541..45000663) extracted from Lotus japonicus Gifu genome v1.2.
AATGCATATTCCCTTCAAAAAGAAAAGACTTTGGCAGAGTCGCAGAGACCACGAAGAAGAGACTGAGCGAGACCTAGTGA CGGCGGCGAGTCACAGAGACCAATCCTCTTTCTTCTCTGGTAATCAATCATTCGTATCCCTAACAATCACGCAAATCCCA TTCAACTTTTCACTAATTTCCTTGCATTTTCTGTTAGCCATGTAGTTCAGACCCACATGTTTTGATGGCTATTTTCTTTT CCATTATTGCATCATGAATAATATGTTTGAGAGAAAAGAGTGGCCGAGAGGAATGTGGTTATAATTTTGTTAAGAATTTT GATTGATTTAAGACAAATGGCTGAGAGGTGTTCATAGTTTTGTTAATAGTAGTTTCATGGTGTTAGAAGTCCCACATTGG CTAGAGATAAAGCATAGATAGCCTTTATAAGGGTAGTGCAAACATCAACTCTTGAGCTAGCTTTTGGGTTGAGTTAGGCC TCCCTAGTCCTAATACATGGGCATACGACTTTGCTTGCTATTGGATGTTTGCCTTTGTTTTTTCAATTGCTATTTCAGAA TCCACCTGAAAGTTTTTTTTTCTTTATTTTTCCAGTGTGATCGCGGAAGCCGACTTTCCAAGTGGTGCTGTTGCCAGTCA AGAGAACACCAGGAAGAGGTATCTTGTCTGTTGCTTATGAAGTGAATTACTGTCTGAGAATGTGAAGGTTGATAGTACAG TCTTGATGAATTGGGAATATATCATATTGCTTGTGTAAAAACTATCTTTTAGTTATCTGAGACTAGACTACATTCATTTA CATGGAAAGTATAAACTTGAAACCATCCATGATAAGGCCACATGAATTTGGTAGAGAGTTTAAAATCTCAATCACCTTAT TGGGTTGCATTACAGTGTTTAACTTATAGATGGATTGGGTAACCCTTTTATTTTGTTTTGAAAGAGTAATGATGCAATCT CTCGAATCAGTTTACAGTTTGGTTGTAATTATTGCAGGTTTTGCCATGACCTTTCATTTTCTTATTAGATGTGATAAGCA TGTGATTGTGAGGTCTTTTTGAATCATATTTTTGTCGATGCTCCTGATGATGATATATGAAGTGAATATTGCCATTTTAT AATAACTTTGATGATGGTGAATTTTTAACCTTTTTTACTCATAATTAATTTGTTACCTTCATTTTTACTTTGAATGTATG AGGAAACTTTGGTACTGTATGAATATTTATCTATCTCTTTGCTTGCATTTTTTATAAGCTGAAGATATATACTTGTCTAG TTGTGTTCTTTTAGTCTCAGTCTCTATAAGAAAATTCTGCTTATTTTACTATTCTCTAATGACTTTGTCAAGATTCCTGG ACGTTTCTGTTTGGTGGGAATCTATCTTGATGTGAAATACATGAGATTTTTAGTTGTCTCCTCAATGCAATAATTTAGAA GTTAAAACCAGTTTTGAAATTAAACTTGTTTTAGATAAAAACGAAAACAAGTTTAAAGTGGATTTTCCTGAAAAAAACAA GTTCAAACCAGTTTTAAAACTGGATTTTATGTAAAACCGGATTTTTAATTGGATATGGTTCAAAAACCGGTTTTTAAATT GGATTAAATGTGGTTTTGGTTTTAGAACCGGTTTTAAATGCGGTTTTAAAATAAACCGATTTTTATCCGGTTTTAAACAA AAAAACCGGTTTTTATTCTGGGTTAAACATAAACCGGTTTTGAACCGGTTGTACGAAATAAAAACGGTCCAGTTCTTAAA ACCAATCCATATAAGTGAAATTTAATTGGTTATAGTTTGGTTTGGTTAAAAACCAAACCATGCACACCCCTACGCACCGA TTTCACTAGTGCAGCATCACGAGTCATACACGGGCTTTGTACCACGGACAAAACCCCTAACCTCACTAATCTACCCACCA GTCATTTCACCCTCTATATATAACCTTTTCCCCTAATTCCTATTTCACAGTTCACGTTTCTTCCACAATCTTCCTCTTCC ATCAACTGCTACCACTTCACATACTCGACGCACGAATGGCGCAGTTGAAAGCACTCCCTGCATATCCATCCTCTGCTACT CCTCCTTCCCTGCATTCAACAGGTTCCATTTCCATTTCCATTTTCATTTCCTTTCACTTTTTGTTAGAGATTTTCATTGG CATTTTCAACTTCTCTCAATTTTTGCAGTTCACCTTCTGCATCATCAGTTTTGGAAGGCAAAGCCATCATCATTCAAACA GGTGATCTTTTAAAAAAATCAAAATTTTATTCCTTAAAGTTCACAAACACATGTCTGAGCCTATTTGTTTGTTTTGGTGG TTACATGTTGGTCTTATGTGGGACTTTTGTGCTGTTTGTAGTTTGGACCAAGAGCTTGTGTTGGTGCTGGTAAACTTCAA GGTGAGATTTTGCTGTCTCAGGCTTACTTTTTTTTTTTTTTTGAATTTAAGAAACATTTACACAATGCAGTTGCATTATC AATTTTTTGTTTCCCGTTCCACCTGGGGTTAACACATTTTGAAAAATGGTGCATCTTTAAATTATGAGAGCAACATTAGT CATTAACATGTGATGTTTCTTAGTTGCTCTTTAAAGAGTTGAATCTTTTAATTAAAAACTAACTAGCTGTTAACATGTGG CGTTAAGTGTTTCTTTTTGTGTTTTTCATCTGTCAGAATTGACTTATCATTTTGAAAATGAACATTCCTTAACACAATTA TATCATGATTGCAATTGGCAAATAAATTTTAGAAGGGTTTTTGTTTGTAGCTTCTTAGGTCATGGATGGTTTTATGTTGG AAACAAATGAGTTTCTTAGAGGTGCTTGTGTTCACCGCTTGCTATATTGATTTGATGCTGTTTGATTTTAAGTTTAAGGT CTGTAATGCTATTGAAATTCGCATGACATGCAGCTATAAAAGCAGTGCTATGCAGTGATACAGATGTAGAAATTTCTGAG ACCAAGAAAGGTAGTGGGCTACGAGGCAAATTGAATAAGGTTGTTCTTGCTTACAGTGGTGGCTTAGACACATCCGTCAT CGTACCATGGCTGAGGTATAGACGGTGTCTTGTTCTTTTCGGTTTTCTGCTAGACTTCCATCACAAGTTCAATATATCAG ATTTTTCCTATCCCATATATATTTTTTATGGCAAATATTTCAATGTTAAAGATGTAAATTTTTTATGTAGAATGTGTAAA TAGAGGTTACAAACCATTTAGAGATTTTATACATGACTTGATGAGTTTTAAACCCGAAAAATCCAAATTTTGTAGAGAAG CATGGCAGCAAAAATAGACAATTCTGAATTTTTTTTCTGGTTATGATAGGGGATATTCAGCAGTAGATATCCGTGGAGTT ACCTTTTGTTGTATAATTGTGTCCTTATTATAATATCTTATTTAGTGATTTTGGCATTGCAGAGAAAATTACGGTTGTGA AGTCGTTTGCTTCACTGCTGATGTTGGCCAAGTATGTTATGCCTTTTAGAATTTAATTTCTTTGATCGAAGTTATTGCTG TGTAAACTTGGTTACTTGAAAAGGTGTTTTAAGATTGTGAACTTCTGGTTCGGGGAATTTTCTCTACTCAGTTTGTTTAT GTTCTGCATGTTTGGCAACAAAACTAAATTGCACAGGGACTAAAAGAGTTAGAAGGTTTAGAGGAGAAAGCCAAAGCCAG TGGAGCCTCTCAATTAGTGGTTAAGGACCTGCAGGAGGAATTTGTTAAAGATTACATATTCCCTTGCCTGCGTGCTGGTG CCACTTATGAGAGGAAGTATTTGCTTGGGACCGCGATGGCTCGCCCTGTAATTGCAAAGGTAACTTCTTGAAGTGTTCTA TGTCATCTCACTTGGTAAAACCATTTTTTCTATTACTCTGTTAGCTCTTTGAGGGCTGTATTCACTTTTCTTTTTCTCTT GATATATTGTAAAAAATCATTATTCAATGATTATGGAACTTAGTTATATATTCACCCCTTGTATAAACATGTTTTGATTC ATACCTGCTGATGGATAGGCCATGGTTGATGTTGCCAAAGAAGTCGGAGCTGACGCTGTCTCCCATGGGTGCACCGGGAA AGGAAATGATCAGGCATGTCTTACTATTATTATGCTCACAAAACAAAATCATGTCGGTTATTCTATTCTGACACATTTAT TTATGTATGAACATTTAGGTTCGATTTGAGCTGACATTCTTTGCTCTAAACCCCAAGCTAAATGTCGTGGCTCCATGGAG GGAGTGGGATATTACAGGGAGAGAAGATGCTATTGAGTATGCTAAAAAGCATAATATTCCTGTCCCAGTGACAAAGAAAT CCATATATAGCAGGGATAGAAACCTGTGGCACCTTAGCCATGAGGTACGCAGAGTGGTTATCCTCACTCTAGCTCTAGTT ATACTGTTGAAGTTAGCCATGTCTAATGATTTCTCTTTTTCTTTTCTTGTGGGGGTTTTAGCCAACATTGAATTTAAGGT CAAAAGTTTGATAATCTTTTGAAAGTCATTAATTTGGATCCTCTTATGTTACATACCACCAAGAGGGGTGATAGAGCTAA AAGCTCCTGTCGTGGCATGGTAGTCATGTAACATGCGATGATACAACTTTTACACTCAGCAATTTACTAAATGTTGATAA CTGAGGGGTGTCATGTCAGCATCTGGAATTAAGACCCTATATTCCTTTTGATTAAGATGATTTATCAGTGCATGGTTCAC TACTATAAGAACACCCACAAACCCACAGCCATATTCGTCACAAGGCTGGATATTACTGTCATTGATACATGTCTGCCTAT TCTATGTACCTTTTTCATGAGAAAACCCTCATTTTTATTCTTCAGAGATACTAGGACTATCACTTTAGTCCATGAAAGAT TCTCTAAACCAATGAATGTCAGGTCGGGGGTTTCGGCCTTGTTATCAATTAGTTGTCAATTTAGTTCCTCAATAATTCGA AATGTCATCGTTTGGGTCCTTTTATTATCCTCTGTTTGAGGTTGTCTAACGGATGCTGACATAGCCCGTTATCTGCTTGT TTGGATGACATACATGGGCTGTTACCTACTTGCCATATGTTTGTGGTCATTGGAGGGCCTTCTAACTTAAATTCTATTTT AAAGTAACAGAAGGACCAAAATGGGGATATTTTAAATTTGTTATGTACAACTAAATTGGTAAAATCTTCCAAGAACTAAA ATGATGACACTTGAATCTTTTAAGAACAAAAATTGGGGTTTACTGCAATTTCTTTTTTAAAAGCATGACAAAGATTCTTG AAAACAGTTTTGATTCATTCACACCCAGTTTCTCTTCCATCTCATTTCTGCTGAGTTTTTCTTCATCTCTTTCTTCTTTT CCTATCATGTCACCTATTATATCTGCCACTTCTCTCTCTTCTATTCCTATATCTCTCTCCGCAGTCTCCGGCAGAGGTGG AATTGAGTGGTGAATCCTATAATTTGTTACTAGTCTCTAGGCTGTGTCAACCCTCATTGGACGCACAAGATCACTTCTTT GCTGTAATGTTGGAAGTTGCTAATCTTTAGTTTGATCTAGGGTAATGCTTTATGTGCTCTAAAAACTATATTTTGGAAAT TACCTATTGCTTTTTCTCTGATATATATGCAATCTATGATACTGAAGGGTGATATTTTGGAAGACCCTGCTAATGAGCCC CAAAAGGATATGTACATGATGTCTGTAGATCCTGAGGATGCCCCAGACAAACCAGAGTAAGCTTCCTTCAGAACTTGTGA TTTTTCTTTATATATAACGTCCAAGTTGCGGCTAAAAATGTTGTATTTTACATATTTTTGGATTTTGTATTTTAAATTTA TGAAAGCATGCGTGATGCTATGCAGATATGTCGAAATTGGGATAGAGGCAGGGCTTCCTGTTTCAGTCAATGGGAAGAGG CTTTCGCCAGCGTCATTACTAGCAGAGCTCAATGAGATTGGCGGAAGGCATGGAATTGGCCGGATTGACATGGTTGAGAA TCGGCTCGTAGGTATGAAGAGCCGCGGAGTTTACGAAACTCCTGGCGGAACCATCCTGTTCGCTGCAGCAAGGGAGCTAG AGCTTCTGACGCTTGACCAAAAAGCAATGCAAGTCAAAGATTCGCTAGCCCTTACCTATGCAGAGTTAGTGTATGCTGGC AGGTGGTTTGATCCGCTTCGCGAGTCCTTGGATGCGTTTATGGAGGAAATCACAGCGACCACAACAGGTTCTGTGACTTT GAAACTGTTCAAAGGTTCGGTTGGTGTAACCAGTAGGCAGAGCCCCTTTAGCCTGTATAGGCAAGACATTTCATCATTCG AGAGCGGGGAGATATATGATCAAGCTGATGCTGCGGGCTTTATTCGGCTTTATGGTCTTCCCATGAGGGTTCGAGCAATG CTTGAACAGGGTATCTAAGGTTGATTTCATTTCAAACTATTTGGGAAAATAGGACTTGCTTTGTTGCACTACACAAATTT GCTTGTCTAGAACAAAGGTAGAGTGTAGCTAGAGAGTACCCTGGATTGTTAGTGGATCAGCTACGCCTTAATAAAATTTA TGTATGTCTGCCTCTCAGCATCAAACATGGTCTCCATTGCCATTTGTAAGTGCCTTCCTCTAACCCTCTTATGGTTTTTT TTCATGTCTTTCATAACTGGTGAACCATCAAATTTTAAGGTTCCTGAATAAAAGGTCCACATGTATCTCCATTTCCTTGA GAGGATGCTAGTCTTTGCAGCTTCATTTATTGGCAATTTGGATAAAATTGCTCCAGGAATTCCATCTGGTAATTGGTTGA TAAGATCTTCTTTGTAGTCTTTTTCATTGTTAGCTTTTGCTCTCTTCTGTTTATGTTCCCTGCTAGCATCCTGCATGATT ATTCTTGGCCTAAACGTGACCAAAATTTATGGATCATCAAGATCAATAAGGATAATGAATAATTGAAATTGCAAGAGAAT AATCAATAAAAGAGGCATAGAATAGAAAATCAGGGGGCAAATGGAGCAAATGAGTTCACTAATGTTGAAGGAGAAGAAAA ATTCATTGAATGTTTACCAACTGGAGGAAGAAACTTGGAAGATGATAAATCAAATAAATCCTCTTTCAATTATGTCAAAA TGT
CDS sequence (LotjaGi2g1v0122200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCAGTTGAAAGCACTCCCTGCATATCCATCCTCTGCTACTCCTCCTTCCCTGCATTCAACAGTTCACCTTCTGCA TCATCAGTTTTGGAAGGCAAAGCCATCATCATTCAAACAGTTTGGACCAAGAGCTTGTGTTGGTGCTGGTAAACTTCAAG CTATAAAAGCAGTGCTATGCAGTGATACAGATGTAGAAATTTCTGAGACCAAGAAAGGTAGTGGGCTACGAGGCAAATTG AATAAGGTTGTTCTTGCTTACAGTGGTGGCTTAGACACATCCGTCATCGTACCATGGCTGAGAGAAAATTACGGTTGTGA AGTCGTTTGCTTCACTGCTGATGTTGGCCAAGGACTAAAAGAGTTAGAAGGTTTAGAGGAGAAAGCCAAAGCCAGTGGAG CCTCTCAATTAGTGGTTAAGGACCTGCAGGAGGAATTTGTTAAAGATTACATATTCCCTTGCCTGCGTGCTGGTGCCACT TATGAGAGGAAGTATTTGCTTGGGACCGCGATGGCTCGCCCTGTAATTGCAAAGGCCATGGTTGATGTTGCCAAAGAAGT CGGAGCTGACGCTGTCTCCCATGGGTGCACCGGGAAAGGAAATGATCAGGTTCGATTTGAGCTGACATTCTTTGCTCTAA ACCCCAAGCTAAATGTCGTGGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATTGAGTATGCTAAAAAG CATAATATTCCTGTCCCAGTGACAAAGAAATCCATATATAGCAGGGATAGAAACCTGTGGCACCTTAGCCATGAGGGTGA TATTTTGGAAGACCCTGCTAATGAGCCCCAAAAGGATATGTACATGATGTCTGTAGATCCTGAGGATGCCCCAGACAAAC CAGAATATGTCGAAATTGGGATAGAGGCAGGGCTTCCTGTTTCAGTCAATGGGAAGAGGCTTTCGCCAGCGTCATTACTA GCAGAGCTCAATGAGATTGGCGGAAGGCATGGAATTGGCCGGATTGACATGGTTGAGAATCGGCTCGTAGGTATGAAGAG CCGCGGAGTTTACGAAACTCCTGGCGGAACCATCCTGTTCGCTGCAGCAAGGGAGCTAGAGCTTCTGACGCTTGACCAAA AAGCAATGCAAGTCAAAGATTCGCTAGCCCTTACCTATGCAGAGTTAGTGTATGCTGGCAGGTGGTTTGATCCGCTTCGC GAGTCCTTGGATGCGTTTATGGAGGAAATCACAGCGACCACAACAGGTTCTGTGACTTTGAAACTGTTCAAAGGTTCGGT TGGTGTAACCAGTAGGCAGAGCCCCTTTAGCCTGTATAGGCAAGACATTTCATCATTCGAGAGCGGGGAGATATATGATC AAGCTGATGCTGCGGGCTTTATTCGGCTTTATGGTCTTCCCATGAGGGTTCGAGCAATGCTTGAACAGGGTATCTAA
Protein sequence (LotjaGi2g1v0122200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQLKALPAYPSSATPPSLHSTVHLLHHQFWKAKPSSFKQFGPRACVGAGKLQAIKAVLCSDTDVEISETKKGSGLRGKL NKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGLKELEGLEEKAKASGASQLVVKDLQEEFVKDYIFPCLRAGAT YERKYLLGTAMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNVVAPWREWDITGREDAIEYAKK HNIPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPQKDMYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLL AELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFAAARELELLTLDQKAMQVKDSLALTYAELVYAGRWFDPLR ESLDAFMEEITATTTGSVTLKLFKGSVGVTSRQSPFSLYRQDISSFESGEIYDQADAAGFIRLYGLPMRVRAMLEQGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 78 | 475 | 398 | 1.5E-201 | – | |
| PANTHER | 78 | 475 | 398 | 1.5E-201 | ||
| Hamap | 80 | 476 | 397 | 53.657 | ||
| SUPERFAMILY | 81 | 250 | 170 | 1.48E-47 | – | |
| Gene3D | 81 | 251 | 171 | 2.2E-72 | ||
| TIGRFAM | 82 | 471 | 390 | 9.8E-151 | ||
| CDD | 83 | 467 | 385 | 0.0 | ||
| Pfam | 84 | 470 | 387 | 3.1E-158 | ||
| ProSitePatterns | 86 | 94 | 9 | - | ||
| ProSitePatterns | 195 | 206 | 12 | - | ||
| SUPERFAMILY | 250 | 476 | 227 | 3.66E-90 | ||
| Gene3D | 253 | 477 | 225 | 1.8E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Argininosuccinate synthase activity | Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Arginine biosynthetic process | The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid. |
Expression pattern of LotjaGi2g1v0122200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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