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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0133300 |
| Transcript ID | LotjaGi2g1v0133300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1; TrEMBL-Plants: tr|G7IW90|G7IW90_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi2g1v0133300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:48310122..48311835) extracted from Lotus japonicus Gifu genome v1.2.
ATCACAAAGCTTTACCTTATAAGTGCATTTGAGTCCTGAGTTTAAAGCACAAACTGAAACCCATTCCTTTCCTTGTTGTC TCTCTCTTCTTTGATTTGTAATCTCCTCACTTGTTCTTGTGATAATGGCAGCAGCATTGGTGGGTGGAGCTTTCCTTGGT GCTTTCCTCAATGTTGTTTTGGATAAGTTGGCTTCCCCTCAAGTTGTCAACTTGATCCGAAGGAAGAAGCTTGACCCCAA ATTGCTTCAAAGGTTGGAAACAACTTTGAGAGTGGTTGGAGCTGTGCTTAATGATGCTGAACAGAAACAGATTAGAAACT CTAATATCAACGGCTGGCTGGATGATCTCAAAGATGCTGTCTACATGGCTGATGACTTTTTGGATGAAGTTTCCACCAAA GCTGCAACTAAGAAGAAGCAGAAGCAGGTCAATAACTCGTTCTCTCGCCTTTTTAATGTGCAAGATAGGAAGATGGCTAG TAAGCTGGAAGAGATAGTAGTCCAACAAGAATCTATCTTGAAACTCAAAAAGAGTCTTGATCTCAAAGAGATTGCAATGG AGAACCTGTCATATAAAACTCCATCCACATCTCTCCAAGATAGATCTCATATATATGGCAGGGATAAAGATAAGGAGGCC ATCATCAAGTTGTTGTTAAATAATAATAATAATGATGGTGATGAAGTACCCGTGATCCCTATTGTTGGCATCGGTGGGGT TGAAAAGACCACTTTAGCACAGTTGGTTCGAGCTATGGGTTTGAGCTTTTGGAAAAGTCCTGGTTTTCTGGTTTGGCTTC CTCAGGTGCGTGTGCAGTCAGGGCTGGGGTCTGTCCGCTTCAGGTGACCCCGCTGACTTTGCCAGAGCCTCCTCCTCTCT CGGTTGTGGCTCCTTTTGCTGGGAGGGTGGAGGTCGCTGGTTTTGTGTCTGAGGTGGGCGCGTCTGGTTTGGCTCTCTCT CAGCTTCCCCGACGGCGCGGTCGTCCTAAGAAGTCTCCTCCTTCCTACGTGAGTTCTTGTGCCCGCTCCCCGGCGTGCGA GGAGGTGCGGGTGGTCGATGAGGATCCTTCGCCCTTGTCGTCGCCGACTTCTTTTCCTTCTAGCGGTGGGCCCTACTTCA CGCGTTCGAAAAAGACGTGGCTTCTTGGCAAAGTTTTGGGTCTGGAGTTTGAAGGAAGCGACGTTGAGGCTATTAGAGGT TTGGAAAAAGTCTACGAAGATCATTTCACAGACCTTTGGTTTTTTCGAGCTATGGTCCTAGGAATTTTATAGGGTTTGTC TGTGCCTTTTTTCCCTGGTGCGGGTTTGTTTGTAATCCGGTGTTGATCCTTTTGTGCGGTCTAATTGGGTTCCCTTTGTG CGTCGTGGTGCCTTGTTTTTTTGGGGCTTCCTGCGCTCCCTAAGGGTGCTGTCCTTAGGGGTTTTTTGTGGTCATTAATA TATTTCCTTTATCTTTCAAAAAAAAAAAAAATATGAAGAGGTGCAATGTATCATGCTATCAAAGCTCAAGTTCTTGAGAA CATTATCATTTTGCTTCCGAAACATGAACACACCGCCTGATTTTGTAGGCAAATTGATCCATTTGCGTTATTTGGATCTC TCAAGGACAAATGTAGAATCATTGCCAGAGTTGTGTAATTTGTATAATCTACAAACGTTGAAGCTGAACGGCTGTTTTAA GCTGACCATAATACCTACTGGCATGCAAAATCTT
CDS sequence (LotjaGi2g1v0133300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCAGCATTGGTGGGTGGAGCTTTCCTTGGTGCTTTCCTCAATGTTGTTTTGGATAAGTTGGCTTCCCCTCAAGT TGTCAACTTGATCCGAAGGAAGAAGCTTGACCCCAAATTGCTTCAAAGGTTGGAAACAACTTTGAGAGTGGTTGGAGCTG TGCTTAATGATGCTGAACAGAAACAGATTAGAAACTCTAATATCAACGGCTGGCTGGATGATCTCAAAGATGCTGTCTAC ATGGCTGATGACTTTTTGGATGAAGTTTCCACCAAAGCTGCAACTAAGAAGAAGCAGAAGCAGGTCAATAACTCGTTCTC TCGCCTTTTTAATGTGCAAGATAGGAAGATGGCTAGTAAGCTGGAAGAGATAGTAGTCCAACAAGAATCTATCTTGAAAC TCAAAAAGAGTCTTGATCTCAAAGAGATTGCAATGGAGAACCTGTCATATAAAACTCCATCCACATCTCTCCAAGATAGA TCTCATATATATGGCAGGGATAAAGATAAGGAGGCCATCATCAAGTTGTTGTTAAATAATAATAATAATGATGGTGATGA AGTACCCGTGATCCCTATTGTTGGCATCGGTGGGGTTGAAAAGACCACTTTAGCACAGTTGGTTCGAGCTATGGGTTTGA GCTTTTGGAAAAGTCCTGGTTTTCTGGTTTGGCTTCCTCAGGTGCGTGTGCAGTCAGGGCTGGGGTCTGTCCGCTTCAGG TGA
Protein sequence (LotjaGi2g1v0133300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAALVGGAFLGAFLNVVLDKLASPQVVNLIRRKKLDPKLLQRLETTLRVVGAVLNDAEQKQIRNSNINGWLDDLKDAVY MADDFLDEVSTKAATKKKQKQVNNSFSRLFNVQDRKMASKLEEIVVQQESILKLKKSLDLKEIAMENLSYKTPSTSLQDR SHIYGRDKDKEAIIKLLLNNNNNDGDEVPVIPIVGIGGVEKTTLAQLVRAMGLSFWKSPGFLVWLPQVRVQSGLGSVRFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Pfam | 10 | 101 | 92 | 4.6E-19 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 240 | 220 | - | – | |
| PANTHER | 37 | 208 | 172 | 1.2E-31 | – | |
| PANTHER | 37 | 208 | 172 | 1.2E-31 | – | |
| Coils | 41 | 61 | 21 | - | – | |
| Gene3D | 146 | 231 | 86 | 4.4E-9 | – | |
| SUPERFAMILY | 151 | 208 | 58 | 6.7E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0133300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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