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LotjaGi2g1v0142200.1

Overview

Field Value
Gene ID LotjaGi2g1v0142200
Transcript ID LotjaGi2g1v0142200.1
Lotus japonicus genome version Gifu v1.2
Description Acetyl-coenzyme A synthetase; TAIR: AT3G48990.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q9SMT7|4CLLA_ARATH Oxalate--CoA ligase; TrEMBL-Plants: tr|A0A1J7H0G3|A0A1J7H0G3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0142200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:51750118..51756232) extracted from Lotus japonicus Gifu genome v1.2.

ACATAGTGAGTGCGAAAGCGTTGCATTGGTTACTCTTTGGCTTAATGTTTCTGATAATTGTGAGTACTGACCAGAGTCAG AGCCTGTCATTTAAACATTCAGAAAAACAATGTTAGAGTACCATAATTGTTCATACACAATAGTTAACATGTATTCATCA AAGCATAGAGTTGTACTACATGACCAAATCTTGGTCTTACAGATCAAACTTTACAAATATCCCTAAAACAGAAAAAGAAA GTCAGCACAATAAACAGGAGGCCTCCAAAAAGTCAATTTAAAAAAATTCACCATACCCGACCAGAAAGAGAAACAACCAA CCACCACCCTGTGGAGGTTTGTGCGCTTGAATCATGTTCCCAATCTGGCTCAAATCAGTCACATCTGAACAATCATAGGT CATGCCCAAGCGTTTCCCCATTAAGAGGGCACTCCTCGCTCTAGTCATAACACCATAAGGCTCCGAATACTCTGATGGCA AAATCATCAACTGATTCCCCTCAAGTGCCTCCAAAGATTGGAGGGGGAGGATATCTCACTTGGTGAGTTAAGAGAAATGA ATGGATTGCATGGTGAAGGGCTAGGGTTCAAATCATGGCAACTACCATTTGACCCTAAAAAAAAATGTGCCTCCAAAGAA CTAGAGCCTTCAGGTACACCACAACCATTGGATAATCCACTCTGAACCTTCTTCTTTCCACTCTTCTCAACTAACCTAGG CTAGGCCTAGGGACATTTGCTCCACGACCACGAGGTATATGTCAAAAAAATAACTTTTACTTCTTTTATACTTTTAATAT TCTAAAAATTTCCATGTTCATTATAGTTAATTGAAAAATATTCTTTAATCAAAATAAATATTCAATAATAAACTATAATA ATTTAAGTACATGATTTTTAATCATTTATATGTCATCCTGTAAAATCAAAAGCATAACTATCTTCTATTTTTTAAAAATA TAATTAATTTCTTATTTTTTAAATTTTATACTAATTTCTTACTTAATATACAGTATTAAAAAATTAATTATTGCATATTT TACTAGTATCATTCTTTTTGGAAAAGCCCAATTTGTTAACATCATTTGATCCATTGAACATTGTGCTTTTAGATGATAAC TACAAAGAAACTCACGGAGAATTGCTAATTTGCCTTTGCCTCGTAGATGCCACCGCCACCCACGTCGACCCACTTTATTA CTATATATATCACACGAATCACCCTTCAACATCCTCACCACTCATAGACTCATCATCATTCATCGTTAAGAAAAAACACA ATGGAAACCCCAATAACCCTCACAGGGTTGCTCCGCAGCGCCGCCGAACGATTCCCCTCCCGACGAGCCCTCTCCGTCGC CGGAAAGTTAGACCTCACCCACTCCGACCTCGACAAACTCGTCGAACTCGCCGCCGCTCGGTTGGTCTCCGCCGGGATCA ACCCCGGTGACGTCGTCGCTCTCACCTTCCCCAACACCGTCGAGGTTCGCCCCCAATCCCTCAAAAATTAGGTCATTTTC ATAATTTTTATTTATTGATTTATTTCTTTTTTCTTTTTTTGCAGTTTGTTATAATGTTTTTAGCCGTTATCCGAGCGCGA GCCACGGCGGCACCATTAAACGCGGCTTACACATCGGAAGAGTTCGAGTTTTATTTATCCGACTCCGAATCGAAGATTCT GTTAACGCCGGTAGAAGGAAACAAACCTGCTGAAGCCGCAGCTTCCAAGCTCAACATTCCTCTCGGCTCGGCTTCGCTTA CCCAAGCCGAAGGTGAAGAAAAAGTCAAGTTAACCGTCTCTCTGAACCGCACCGAGTCAGAACCCGACTCTGTCAACTCG GTCGCCGGACTCAGTAACGAGCCGTCGGACATAGCGCTATTCCTCCACACCTCCGGCACCACGAGCCGCCCCAAGGGAGT CCCGCTGAGTCAGCACAACCTGGCTTCCTCAGTACGCAACATTCAGTCCGTGTACCGACTCACTGAGTCCGACTCGACGG TGATCGTTCTCCCGCTGTTCCACGTCCACGGCCTAATCGCCGGGTTGCTGAGTTCACTCGGCGTCGGCGCGGCGGTGACG CTCCCGGCGGCGGGGAGATTCTCGGCGTCGACGTTCTGGAAGGACATGGTGAAGTATAACGCCACATGGTACACCGCGGT TCCTACGGTACACCAGATCATACTGGATCGCCACCTGAATAACCCGGAACCGGTTTACCCGAAGCTCCGGTTTATTCGAA GCTGCAGCGCGTCGCTCGCACCGGTGATCATGGGTCGGTTAGAGGAGGCGTTCGATGCTCCGGTTTTGGAGGCGTATGCG ATGACGGAGGCGTCTCATCTCATGTGTTCGAACCCGTTGCCGCAGGATGGGCCCCACAAGCCCGGGTCGGTGGGGAAGCC CGTGGGTCAGGAGATGGCGATATTGAATGAAACGGGTCGGGTCATGGAGGCTGAGGCTAATGGAGAGGTTTGTATTAGGG GGCCTAATGTGACGAAAGGGTATAAGAATAACCCGGATGCTAATACGGCGGCGTTTTTGTTTGGTTGGTTTCATACGGGT GATATTGGGTTCTTTGATTCTGATGGGTACTTGCATCTCGTGGGTCGGATCAAGGAGCTCATAAATAGAGGAGGTATTTT TCTTATCTATATTATATGGTTTTTATTCATTTATTATAGGGAAAATCTATTGATACCATTCTCATGCCATGCCACCCCGT ATAACGCTTTAAAACACTGGATGAAAAATAATATGAATCCATACTTGCTTTATGTATATTTTTTATAATGCAACTTAAAA TATGGTTTGCATTTTTATCTTACTGCAATTTAAAGTGTGATATAAATAGAAATGAAATGAATAAGTGTGATTGAATAGGT GTCCGGATGAGACTGATTTTGTCTAACTATGCAAGTCTTTATTTTTTATTTATAAATGTTTGAAAGAGGAATTTCTATGC AACCCACGAGATGCAAGCTAGTTGTTAAATGTTTTTGTTGAAGACCTGTCATCGACTTTTGCTATTGTACTTGCCTATGT GTTTTATTTTATATTCTTTGAAAGAAGCCTATGTGTTTTATTATTTCTTCTCATCTAGATTGTTTAATTGTTTAATTGTT TAATTGTTCTTCAAGAAAGTTCTTAATTAACATTTGCATGATTCACAGATAGATCATAATAAAAAATTGATCTGTAATAA AAAAAATACTTAATTAGTAGTTTGAAACTGTCGTGATCCGGACGTCATATATTGTTAGCTGATTATTATGGACGGTGTGA TAATGATGTTAATTGGGCTTTAATTTGGTAAGCACGTTGAGATGAAATGAAACGTAGAAATATGAAACATTTGAATTTTA TTTGCACTTATTTAGTATCACCCAAAAAAAAAAAAAAAGGAGAAAATCTTAATTTTCCCTAATATGCACTACTACTTTAA TCGGTTATAGCAGGTCAACACATTATTTTTTTTAAAAAAAAAAGTATTATTAAAAATTTGTTATATATTAAATTTATTTA AAATAATATGTTGACATGTTATAGCAGGTTAAAAAAAGTGGTGCATATTAGGGTTCACCAATTTTCGTTATTTAAAATAT TTTCTATTTATCTCTGTTATTTATTTGTCGTGATCTTATCATGATTTTTAGGAGAGAAAATATCCCCAATAGAAGTGGAT GCTGTCCTCCTATCCCATCCAGAGATAGCCCAGGCAGTTGCTTTCGGAGTGCCAGATGAGAAGTATGGCGAAGAGGTATG TCGTTTTCTCATTTATTTTTGGTTCTTGCACTTTCCATATCTTCTCTATCTTTTCCCTTCACACTGAAAGAAACAATAAT TGAGCAACAGATTTTTCACACCACTTCTATATTGTTGTATATAGATAATTACAGATATTTTATAGGCGTTGCTCTTCTAC CATTTCAAAATGTGAGGGTTTAGAATCCTTTAATTTATTATTTAACGTATAAATAACTAAATTGTAAGTTATAAAAGTTT ATTATAGAATAAGTCATGGCAAATTTAGTCTGAAGAGAAACCCCTTCACTTTTAAATAAATACCAGAGAAATTATCTATT TTTATTTATCACACAATACATAGCTAAGTTGTATTCACCGAATCATTCATCAGAACATAACTGCATCTGGATCTCAAATG GACCTATCATATTTTGAAAGGTCATATGACCCAAGAATAAACATTGGACTTACTTGGTTTCATATGCATATTTTTATTGG ATGTGAGATGACACTCCTATCTTTTGCATTGGTTTGTAATCCCTGATCGGTCATGAGTGTGGTCCTACCATACCATTGAG GTAACATCTACCTAAAAGCCAAATGGAACCGAATATTCATATGGTATGGGAGTTTTTCTAATTTTATCCCTCAAAAGTCA TACATACTCTGATAATGTACCCACATAAAAAAACTATTCTGCTTGAGAATATTCCATTTTTTTATCTGAACATCTTTTGG CAAATGGAATTAGGCTTTCAATATTGTGTCAAATAAATTAACTTAATTTCCACCAGAAGGGAACAACTATTCATGACCCT AATCTGAAAATTATTTCGTGTGGCCCAAGTGAATGTTGAAACCAAAATCATGTTGATATAAATAAATTTTCTAATTTTTA TTCCACCATGATTTTCGTTTCACAATAGGTTTTCACCGTATATCCAAACACGAACTTATTTCTTCAAATGGTTTAGCTAT ATTAAATTTTGGTTGTTAAGGAAAACTACTTGTTTGCTAGAAGCAACTTATACTCAAATATGTGACACTGGTATGACATA ATATTATGAAATTCTCCCCTAAAATTTCAAGAGGTTGTTTAACTTATATTCTGAGGTATTTAATCTTATCCAAGATGAGT CCATAGTGTTAAGACAAGTAGCTTCAGAATTATACCCACCTTTTACTTGATTTGCATTGGTTCACCTAAAATGGTTCAAA AAGATTCATAATTAGTTCAAACTTACCAAGAATCATTAAGTGGGCATCTTTTTATATCTGTACTGCAAGAGGTAATAAAG ACAATGAAAGTATGAAACATAAATTGTTGGAAAACATCAATTATCCACATACTAGTTCGTTGTAACTGTGTTGGTCATAT GTTTTTTTATCTTTACAACAGATACATTGCGCAATCATCCCAAGAGAAGGATCAAACATTGATGAGGCAGAGGTTTTAAG ATTTAGCAAGAAGAATCTTGCATCTTTCAAGGTCCCCAAAAAGGTCTTCATTACCGATTCTTTGCCCAAGACCGCCACTG GCAAGATTTTGCGCCGTCTCGTGGCAGAACACTATGTTTCCCAAATTTGAGTTACTCAAGTTCCCAGCTTTGGAGCTTAG ATACCTGACCGAAAATAAAGCGTTGGAGTCTGCATTTTGATTACATGTTGGCAACCTAGCATTCAAGAGGAACACTTTGT CTGCATTTTGATTACATGTTAGCCACCTAGCATTCAAGAGGGAGATGTTTCAGCCATTGGTCTTTCCTACAGGATACAAT AGATAGTAGATTTCAATGATTCTTGTAAGTGTTCACAATGTGATAAACCTTTTATTTGGCGTGATTATTGGAGGGAAATT GAGTGAATTGGAATTAAATGGAAATGAATGAAATTGGCAAAATGAAGCATTTTTGTGTCGCTTAGACTATAAAGATAACG TTGTCAAGATCCTGATCCGGATCTTAGAGCAACTTTAATGGGGAGGTCTTACAACTAAGACACTCTCGAAAGTAGTGTCT ACCATTGGATGTCTAATTTACACTTAGACCGTTTATAATGAGGGTGTTGATAGGGGGGTTGAGTTTTGTTGAGATAGTGT AGTGGTTTGTTGAGTTTTGTTGAAGATGATGTGGAGGAGAGAGGTATTGAGGGAGTTCAACATGTTGAAGTTGTAGGTAC CAGAGACACGTGGCGGGCGCCAGGCGCGTGCACCACACGCGCCGATAAGACGCGGAGAGAGAAAGAGTTGTTGGTTTATC TTGTTAGACACGTGGCTCCTCCTGATTGGCTGTCTGGATTTTGATCATCTTAATTTTTTGAACTCAATTATTTCATTGCA AAAAAAATTTCTTGACCAAAATTCATGATTTGGAC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0142200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAACCCCAATAACCCTCACAGGGTTGCTCCGCAGCGCCGCCGAACGATTCCCCTCCCGACGAGCCCTCTCCGTCGC CGGAAAGTTAGACCTCACCCACTCCGACCTCGACAAACTCGTCGAACTCGCCGCCGCTCGGTTGGTCTCCGCCGGGATCA ACCCCGGTGACGTCGTCGCTCTCACCTTCCCCAACACCGTCGAGTTTGTTATAATGTTTTTAGCCGTTATCCGAGCGCGA GCCACGGCGGCACCATTAAACGCGGCTTACACATCGGAAGAGTTCGAGTTTTATTTATCCGACTCCGAATCGAAGATTCT GTTAACGCCGGTAGAAGGAAACAAACCTGCTGAAGCCGCAGCTTCCAAGCTCAACATTCCTCTCGGCTCGGCTTCGCTTA CCCAAGCCGAAGGTGAAGAAAAAGTCAAGTTAACCGTCTCTCTGAACCGCACCGAGTCAGAACCCGACTCTGTCAACTCG GTCGCCGGACTCAGTAACGAGCCGTCGGACATAGCGCTATTCCTCCACACCTCCGGCACCACGAGCCGCCCCAAGGGAGT CCCGCTGAGTCAGCACAACCTGGCTTCCTCAGTACGCAACATTCAGTCCGTGTACCGACTCACTGAGTCCGACTCGACGG TGATCGTTCTCCCGCTGTTCCACGTCCACGGCCTAATCGCCGGGTTGCTGAGTTCACTCGGCGTCGGCGCGGCGGTGACG CTCCCGGCGGCGGGGAGATTCTCGGCGTCGACGTTCTGGAAGGACATGGTGAAGTATAACGCCACATGGTACACCGCGGT TCCTACGGTACACCAGATCATACTGGATCGCCACCTGAATAACCCGGAACCGGTTTACCCGAAGCTCCGGTTTATTCGAA GCTGCAGCGCGTCGCTCGCACCGGTGATCATGGGTCGGTTAGAGGAGGCGTTCGATGCTCCGGTTTTGGAGGCGTATGCG ATGACGGAGGCGTCTCATCTCATGTGTTCGAACCCGTTGCCGCAGGATGGGCCCCACAAGCCCGGGTCGGTGGGGAAGCC CGTGGGTCAGGAGATGGCGATATTGAATGAAACGGGTCGGGTCATGGAGGCTGAGGCTAATGGAGAGGTTTGTATTAGGG GGCCTAATGTGACGAAAGGGTATAAGAATAACCCGGATGCTAATACGGCGGCGTTTTTGTTTGGTTGGTTTCATACGGGT GATATTGGGTTCTTTGATTCTGATGGGTACTTGCATCTCGTGGGTCGGATCAAGGAGCTCATAAATAGAGGAGGAGAGAA AATATCCCCAATAGAAGTGGATGCTGTCCTCCTATCCCATCCAGAGATAGCCCAGGCAGTTGCTTTCGGAGTGCCAGATG AGAAGTATGGCGAAGAGATACATTGCGCAATCATCCCAAGAGAAGGATCAAACATTGATGAGGCAGAGGTTTTAAGATTT AGCAAGAAGAATCTTGCATCTTTCAAGGTCCCCAAAAAGGTCTTCATTACCGATTCTTTGCCCAAGACCGCCACTGGCAA GATTTTGCGCCGTCTCGTGGCAGAACACTATGTTTCCCAAATTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0142200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

METPITLTGLLRSAAERFPSRRALSVAGKLDLTHSDLDKLVELAAARLVSAGINPGDVVALTFPNTVEFVIMFLAVIRAR ATAAPLNAAYTSEEFEFYLSDSESKILLTPVEGNKPAEAAASKLNIPLGSASLTQAEGEEKVKLTVSLNRTESEPDSVNS VAGLSNEPSDIALFLHTSGTTSRPKGVPLSQHNLASSVRNIQSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGVGAAVT LPAAGRFSASTFWKDMVKYNATWYTAVPTVHQIILDRHLNNPEPVYPKLRFIRSCSASLAPVIMGRLEEAFDAPVLEAYA MTEASHLMCSNPLPQDGPHKPGSVGKPVGQEMAILNETGRVMEAEANGEVCIRGPNVTKGYKNNPDANTAAFLFGWFHTG DIGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPEIAQAVAFGVPDEKYGEEIHCAIIPREGSNIDEAEVLRF SKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHYVSQI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.12780
2 416 415 2.2E-100
IPR042099
SUPERFAMILY
SSF56801
4 519 516 1.09E-135 –
PANTHER
PTHR43201:SF14
6 520 515 8.7E-299 –
PANTHER
PTHR43201
6 520 515 8.7E-299 –
Pfam
PF00501
12 423 412 6.3E-93
IPR000873
CDD
cd05926
19 515 497 0.0 –
ProSitePatterns
PS00455
174 185 12 -
IPR020845
Gene3D
G3DSA:3.30.300.310
419 520 102 3.0E-28 –
Pfam
PF13193
432 507 76 6.4E-17
IPR025110

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0142200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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