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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0143500 |
| Transcript ID | LotjaGi2g1v0143500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein; TAIR: AT3G48970.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q84K70|HIP31_ARATH Heavy metal-associated isoprenylated plant protein 31; TrEMBL-Plants: tr|I1MPT9|I1MPT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52085988..52087873) extracted from Lotus japonicus Gifu genome v1.2.
ATTACATGGCAACCCACCAACTAACAAGCAAGGTCATATGCTACAATATATGCAGCAGCTACTCATGATCATGTTATGTG TCCAACAGAGAAAAAGAAAGGAATCAACCAGTGACATTGTCTAGCTAGGACAGCATTTTCCATCATTTCATTCAGAAATA TGTTCAACTTTGTTCATATATTGTGGTCCAGCAATGGAGAGAGAGAGAGAGAAGGAGACATAGCACTAGCAGGGAGAGAC AGGGGAGGGAAAGTGTGCCTCTAAATTGGGGAGCGCAAGATGAAGCCATGCTTTTGCCATATCCACGCGTGATTATACTT CTACACTGTGCATCCTTTTTGGGGATTTCAAAACCCAATAAGGCCTTTTCAGTAATAGCTGTCTAAAAGAGAGAGAACCT TCACAATAGCTTAGTAGCATAGCCAACAACATCACTCACCACAGTCTTCTTACTGCACACAGGCTTCACTGCTCTAAACA AAATCCTTCTCCATACTGTTGTCTAAAGCTAGAGAAGCAATGTCTGTAAGTAACTAAATCTTCTATTATCTTTCTCTAGC ATACACAAGCACAAATAGTTCATGTTTTTTTAGCATGTTTGAATTGACTTATATTTTTTTCAAAATTAATTCTGGCATCC GAAAACTTTTCACTGAAAGCTTCACTAGAGCTATAATTAATTTTCACTCTAGAATCAATTTTATTAGAATTTCTAAACAT GTATAAAATGTGTCCTTGAGAAGGTAATTAAATTATGACAATGTGGGATGTTGCAGAATATGATAGAGGTCAGAGTTCCA AATCTTGATTGTGAGGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAACTCAAAGGTAGAGTTATATTTTTTTTCTT TTCTTAGGTCAATAGCTCAAAGGGGCAGTTTTTTTCGCAATTCAATTTTCTTATTTAATTGTTTGGATACCTTTATACTG TCTGGTGGATTAGGGTGGTGGACTTTGTACACATGGGGTCAAAGGAACAGTTTTTTGGGGTAGATCAGAGCATATTATTT TGTTTTGGACACGATATGAAGAAAAGAAAAAAGAGAATCCTCACATTTCTTTCTTCTTAATAATTGGTGAATAATCAGCT TGGAAATAGGTAGGCACGAAGATAAATAAGAAGAATATTAGTAATGATTTATTATGTCAGGAATTTTAAGAATTTTTACC TAGCTGCTTATTTTTGTATTTTTACCATTTGGAAAGTTGATTTGTAAATTGACATGTACATGTGTTGATATTTTGCAGGA GTAGATGAAGTAGAGGTTGAAATGGAGGCACAAAAGATAACAGTGAGAGGCTATGGCCTAGAGGAGAAGAAGGTGCTGAA ATCAATCAAACGCACAGGCAAAGCAGCAGAGCCATGGCCATTTCCAGGGCATGCTCATTTAACTTCATTTTACAAGTACC CAAGTTACATTGTTAACCAATATTACTATGATGCATACAAAACTGAAGCAACAAATGGAGTCCACACTTTCTTCCACACG CCTTCTGTCTATTCAGTTGCTGTGGCATCTGATGAGGCCTTTGCTTCACTCTTTAGTGATGATAACCCTCATGCTTGCAC TATAATGTAAAGCAATCCTAGGTTGGTTCATATCCTCATTTCTGCTTTTCATTTTAAAAAGAAGATGAGGAAGGAAAAAC TTGAGTGAAATATGCTCCTTATTGTCAATCATGAAATTTTTTGTGTATGTTCATTGGTTAATCTCTTTTGCACAATCTTG AATGTACTGTGATATGCCTCCTTTTAATATCCATCAAGTTTTTTTAAGTGGTTTTTTGTATGATGATGTTTATAATTTAG CTTATAAGTCTAGATACCAATCTCTAATGTAATATTTTGCTGTGGT
CDS sequence (LotjaGi2g1v0143500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCAGAATATGATAGAGGTCAGAGTTCCAAATCTTGATTGTGAGGGATGTGCTTCAAAATTAAAGAAAGCTCTCTT CAAACTCAAAGGAGTAGATGAAGTAGAGGTTGAAATGGAGGCACAAAAGATAACAGTGAGAGGCTATGGCCTAGAGGAGA AGAAGGTGCTGAAATCAATCAAACGCACAGGCAAAGCAGCAGAGCCATGGCCATTTCCAGGGCATGCTCATTTAACTTCA TTTTACAAGTACCCAAGTTACATTGTTAACCAATATTACTATGATGCATACAAAACTGAAGCAACAAATGGAGTCCACAC TTTCTTCCACACGCCTTCTGTCTATTCAGTTGCTGTGGCATCTGATGAGGCCTTTGCTTCACTCTTTAGTGATGATAACC CTCATGCTTGCACTATAATGTAA
Protein sequence (LotjaGi2g1v0143500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQNMIEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMEAQKITVRGYGLEEKKVLKSIKRTGKAAEPWPFPGHAHLTS FYKYPSYIVNQYYYDAYKTEATNGVHTFFHTPSVYSVAVASDEAFASLFSDDNPHACTIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 140 | 138 | 2.8E-76 | – | |
| PANTHER | 3 | 140 | 138 | 2.8E-76 | – | |
| Gene3D | 3 | 69 | 67 | 6.9E-15 | – | |
| ProSiteProfiles | 5 | 69 | 65 | 14.206 | ||
| SUPERFAMILY | 5 | 71 | 67 | 1.83E-14 | ||
| CDD | 7 | 68 | 62 | 1.04856E-8 | ||
| Pfam | 8 | 65 | 58 | 2.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi2g1v0143500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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