Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0147300 |
| Transcript ID | LotjaGi2g1v0147300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT5G62070.1 IQ-domain 23; Swiss-Prot: sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14; TrEMBL-Plants: tr|K7MIL1|K7MIL1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0147300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52842863..52848982) extracted from Lotus japonicus Gifu genome v1.2.
ATGATATTCCAAGTTATGCTCACGACACAAACTCCAAACTCCTCCATTTAAGTGTTCCCAACTTCTTCGAATCTTTCAAC GACTTCCCTTCTATTCCCTTCTTCTCTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTAATGACTTCACTT AACACATAATGGGCTTTTTCCGGCGACTCTTCGGCGGCAAGAAACACCCTCCTCCGCCGGCACTTTCCGACGGGTCGGGT TCCAAATCCGGACCAAAAGACAGAAGGAGAAGCTGGAGCTTCGCGAAAAACAGCACCAGAGGCACATCCTCCAATAAGTC ACTCTCACCACTCAACCACCAATTTGACCCTTCCACCTTCTCCTCTCCCTTCACAGACTCCTTGGATGCAAATAAGCATG CCATCGCCGTCGCCGCCGCCACTGCTGCCGTTGCTGAGGCCGCACTCGCCGCCGCCCATGCTGCCGCTGAAGTTGTTCGG TTAACCAGTGGCAGCGGACCTGTCCCGGCTGCTCAAGACCGGCGGCGGCAGGCGGAGGAAACAGCTGCTGCCGCTGTCAA GATACAGTCAGCGTTCCGAGGTTACTTGGTACGTAAAATTTGCTCAATTTTTTTTGCCATCATGTCCCTGAAAATGATTT TTTTTTTTTGAAATTGGAAATGAAATAGAAACTTTAGATTATAACTAAGTGTACAAACACATATTAGAAATTATGAGCTT ATTAAAATTTATCAGTAGTTGATTTTCCAATTAACAGTTATAAACCCACAATTTATCTTTTTTAGTGCCTCCTTAGTGAA ATGTGTTATGTAATCTATGAATGAAATTAGAGCTAGCATAAAGGAATATTATATGAAAAGGAATTTGTAAGTTTAATACT TTAATTGTGAATTTCCCTTTTATTTCAATGTATGTAAAAAACATTGTGAGTTAAAATCAAAGTTGATAGTCCTTAATTTT GTACATCTGCCCGCCGTCAGAAAGATAAGTTGTATCGTATAGGGATTTGATCCTTGAACCTATCTCACCTCAATTATATG TCTTCTCGCTCTTTCATCTTGTACCAAGCATGTATTTAATTTTTTTTTTTTGACAATTTAGGTATATATTTTTGTACTGA TGTAAATTGTATAATTAAACATGATTTACTGAAATACTCCCTCCGTTCCTAATCTTTTGTTATTTTAACTTTTGGCATAA ATTCCAAAACTTTTGTTGTTTTACAAATACAATGCATTTTTTCTCAATTTATTCCATATATACCTTCATTTAATACTATA CCTCTCACCTACCACCTCTTATTTTCACCAATCAAAATCATAACAAATTTCTTAACCAATAACTATTATTCTCTCTCTGC ACTATAAGAGAACATTAAATAGGGGTCTTTATGTCAACAAATATATCAATGATTGCACTCTTAAACAATGTGCATAACCT TAAACAATAAAAGATCAGGAACGGAGGGAGTAATATTTTTTTATGAAGTTTTGATATGAATGCATTCTATTTTCGTAATA ATTTTTCCTATTAAGCATTGGTACTCAACTTCTTGTTGTACTCAACTTCTTGTTGTTAGCGCGTCAGTTCAACTTTGTTT GACTCTTTCGTTGAAAATTGAAATATGGAATTTTCTCCAGTACTGTTTTTCTCGGAAAACATACACACTAGTCAACTAGT CCACATTGTTTCATTTTTTCAACAGTGTTTCTTTTTTCTTCTTGATCTTTCAAATATCGAAAGCACACGTTGTCTGTTTC AAAATCAGCAAATTAAATAAAACATAACAATTTTATTTTAAGTGTATGGTTAGACTCTGGTCAATGTTTGTGTGTTGTTG TGGACGGGTTTCCACCGACAAATTTTGCTTAGAGGAATGTTCTCCACAAATAATTTTTGTTTATTTCATTATAATAACAT TTTCGATCTTGACAAATCTCACAAGTATGACATGTGCATGGTCAGCATGGAGCATTATCTTTTAGCACATGTATCATCTC ACAAAGCCGGTTTAATTTTCACTTATGAGAATGGTTGTTTAGTGTAAATACTTACGGCGAAAAGATTACTCACTACTATC AGAGTCGTAGATTTTAGGTAAAAAATTTGTTATGGCAAGACTTGAGTGGTATGATGTTGTGAGGACCCGTGTTAAATATT TCAACTAAAAAAATTGACCACTTTTTGGAATTTGGGTAGGTGACAATGCAAGGGCCAAGAGAATTGAATAGGGGAAAACG GGTAATTTGTGAGTGAATGAAGATAAGAGAGAGCCCCACACATTTGTTGAGTTATGAAACTTTCCTTTCGGGGGGCTAAG TAGAATATGTCCCTTTGTCCCCAAAAATAACACCCAAGAATGAAGTGGCCCTGAGACAACCCATCATAATTACCATGTTT TAGGTCATGGCCCAAAGTTACAGTGGTTGTTAGGCTTCAATAGTAGAGTCACACGGAAGTTGGCAATGGTAACTACTTGT GTTTTCGTTTTTGGAATGGTATGGGGGGTATTGATGTGTGTTTAACTTGTTTTCTTTCTTGGGGTAGAAAAAGAGAGCAG CTTTTACCTCACTTTAGGATTAAGGACACAAGGACCTACAAGCTAGGTTGTAATGCTTTCTTTGCTTTCTTCAAAAAGCT GATACATTCTTTATTGATGTATTTTCAATTTTTCACATTTTGGGGGTCCTGCTGTGGGTAATATGAATCAAGGAGGGGAA TGTAATATAGGAAGCTTCAGTGAGTTAAAAGGGCATCAATTATGGATGGCTTTCCACTGTGTATTTATTTTTAGTAATGA TTATACCCATCACCCTCATCAATCCCCCTTCCCTCATTTCTTTTTCCTTTTCATATTCTATACCTTTCTGACATTCCATG CTTATCTGTGTTCCTTTTATTTTATTTTGTTGTGTTGAGAGTCTGTCTCAATTTTATTATTCTTGTGCAATTGCTATCTA AAATGTATATAGTATGAACCCTACATTTCATATGATCTGAGTCGCTCAATCAAAATTGACAGATCATGTTTCATCAAAGA TAAAATGATTTAAGTAAACTCCAAATCTAAGCTGTTTTAGTCTAATCTTCATTCAACGACTTAGATTCTTAATTACGTGA ATTTAGGATTTTTCTCGCGGTAACGAGTCCAAATTCATGAATGTGTTTAGAAATTTGGAAGAGAGAAAAAAACAAAGGAG TGGGCGTTTGCAATAATGTGTTGGTCCGAGTAGAAGAGGTTTAGATCTCTTAAGTATGTGGTTCTGGGTTCAATCCCTAG ATACATGTGTAGGAAAAAAAACACGGTTGGGAGGGGACCCCACTTTGGTGCCCGACTGTACCCAGGAAATTAGTCTCACA CCTAAAAGGTTTGTGCAGAAGCTAAGAATTCATTTTTGTGCTAATAAACATTATCCACTAAACAAATCTGTTATTCTTTG CCTGATTACTTTCTTCTTGGGTTTGGAATGATGTTTCATCTTAGTTGTTCTTTTTTTTTCTCATGAAGGAATCTAATGTG TCAATCAATGCTACTGCTAATGGATAGCATCATTGTATTATGAGATGAAATTTTAAAATTTCTACTGAAATTTTTGTGAT GAATTTGGAAGGCAAGGAGAGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCTTTGGTGAGGGGCCACATTGTA AGAAAGCAAACTGCAGATATGCTCAGGCGCATGCAAACATTGGTGCGGCTGCAATCGCGGGCACGTGCTAATCGGGTGCA CATGTCAGATAATATGCACTCTTTCAAGTCTTCACTTTCTCATTACCCTGTAAGAAATGCAAATAATTTTTGTTCTTAAA TTGTTGTCTGATTCTTGCCTATTAAGCTGATGCTAACTTGCTAGAAAGGCTATGATAGCATCTCACTTTCTTCAAACTTG TCCATATCTTTAACAATGCCTTTTATCTGTTAATTTTTTTCCCTTTACTCCATCACCCTACCAATTGTTGCAATTTGGAA TCTGATGTGCAAATTAACTTTCCAACCTGTCACAAACAGCATGCTGCAAATTAATAGTGTATTTGGGTTCGTGGTGGTGC ATAATCCAAAATATGGTAACTCTAGAAGTTACATTTTGTAACTTTTCTCAGAAGTGATTATGGGGTTTCCTCCCATAGAA CCAAACAACACTATAATTTGGTGCTGTGGTAGGCTCCTTTCAAAATAGGGCTTTAGGTTGGCTTGTGCCATCTTGGCAAG CATTAAGATGTGACTCATCAATTAGCATGTCTACATATGATACAACGTATTAGGATTTTCTCTCCCTATTTGGTGTCTCC TTCTATGTCCCACAAATCAAGTTGTGTCATGTTAATTAAAAAGGTACTATTAAATGGATGGTTTTTAAAAGATGAGATAG GGAATGAGACACCAAATGGGGATAGAGGATTTCGGTCGGTCTAAAAGATTGATGATGATCGTTAGTTCATTACTATGCAG TGTACGGATCATAATAACCATTAACCTCTAATTCTGTTTTGAAAAAAACATAATTGTAGGTCCCTGGTGATCATGAGCTC TCACTTCGCGCCTTTAGTACCAAATTTGATGGATCTTCTATCCTCCAGGTACCTTTGGTTCTTGCCCATAAAACTGTATT ACAAGATCCATAGTAGAGTTGAATCAAAACAGTCTACATTTTCTTTGAAACATTTTTCAAATGTACTGTGGTTTTATTAT ACTTGAAAGCAAACACATGTATATTAGTATTTCAATCAGTTAATTGGTGGTGCAATGGAGAAAAGTACCTAACTAAAAGT TGAAGATGATTTCAACCATGCTACTCCAAGCAATGAAGCTTTTCATACTAATTAATTCCACCTTTAATTGAATTCTGCAG AGATGTAGTTCCAATGCAAATTTCAGGGACATTAACTTAGAGAAAACCCGGTTCGGTTCCGGTTGGTTAGACAGTTGGAT GGAAGAAAATGCATGGAGCCAAACAGGAGACGCTTCATTGAAAAAGGGTCACCCTGATGATGAGAAGAGTGACAAGATTC TTGAAGTAGATACTTGGAAGCCACACTTAAACTCACATCATTATTTGCCTCCTGATTACAGTAATGAGAATTTTACAGCA CACGAGTCTCCATCGAAACGATCTTCTTCTAAAGCTCCGAATCCAAGTCATTCTTATAGGGAGATCTCATCCTTTAATTC TCTGAAACTTCAAAAAGGAAAAGAAGCAGCTTCATCACGAACCGCGGAGAACAGCCCACAAGCATTTTCTGCCTCCTCTA GGCTTGGAAGTAGTGCGAGGCGAGGTCCTTTTACGCCTACTAAAAGTGAGTGCTCATTTAGTTTCTTCAGCGGCTACCCA GGTCATCCGAATTACATGGCGAATACTGAATCTTCTAAAGCTAAGGTCAGGTCACAGAGTGCTCCGAGGCAAAGGCTAGA GTTTGAGAGATATGGCGGCGCCACAACTAGAAGGTCATTGGTTCAGGGTCTTTGGGAAGCAGGGCCTAATTCAGATAGGG ATTCGGATTTCAGAATAAAGGGCTATTCAGTTTCAACAACAAGCAGCTTCAACAGAATTGGGAGTACTAATTTAAGGTGA CACCACGTCAAGTTTTCTGAATGAAGATGAAGACAATTTTCTCTTGCTTGAGTTTTCTTAGTATGACAGCAGTTTTAGAA TGTAAGTATTTGACCAAAGGCCACATTATTGTTGCTAGCTCCTGACTGGCCTTTAACTGAATTTTACTGTGTTGAGATGT TGCAATGTGTTTTGAATGTTTTCGTTAATCCAATGTTGGTTTTGAATGTGTGATTCATCAGAAGCTCCTTTTTATGAATA TAGTATTGATTATGGGCTTAAATACTCTGAAAGTCCCTGAAATTGTTCCCCATATGAAAATAAGTCCCTGGAAATTTTTT TTCCGATTCCGAATCCCTGGATATTTATTTTTAATCAGAATAGGTCCCTACTCGTGTTACCAGCTTAGGTGGCTCAATTT TTGTTGAGTCATTGATTCCACGTGGCTTTTAAATTTTTTTTAAATACACATGGATTAAAAAAATAAAATTAAACATTTAA ATTTAAAATTAAACCCTTAATCTAATTAACCTAAATCCCT
CDS sequence (LotjaGi2g1v0147300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTTTTTCCGGCGACTCTTCGGCGGCAAGAAACACCCTCCTCCGCCGGCACTTTCCGACGGGTCGGGTTCCAAATC CGGACCAAAAGACAGAAGGAGAAGCTGGAGCTTCGCGAAAAACAGCACCAGAGGCACATCCTCCAATAAGTCACTCTCAC CACTCAACCACCAATTTGACCCTTCCACCTTCTCCTCTCCCTTCACAGACTCCTTGGATGCAAATAAGCATGCCATCGCC GTCGCCGCCGCCACTGCTGCCGTTGCTGAGGCCGCACTCGCCGCCGCCCATGCTGCCGCTGAAGTTGTTCGGTTAACCAG TGGCAGCGGACCTGTCCCGGCTGCTCAAGACCGGCGGCGGCAGGCGGAGGAAACAGCTGCTGCCGCTGTCAAGATACAGT CAGCGTTCCGAGGTTACTTGGCAAGGAGAGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCTTTGGTGAGGGGC CACATTGTAAGAAAGCAAACTGCAGATATGCTCAGGCGCATGCAAACATTGGTGCGGCTGCAATCGCGGGCACGTGCTAA TCGGGTGCACATGTCAGATAATATGCACTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGGTGATCATGAGCTCT CACTTCGCGCCTTTAGTACCAAATTTGATGGATCTTCTATCCTCCAGAGATGTAGTTCCAATGCAAATTTCAGGGACATT AACTTAGAGAAAACCCGGTTCGGTTCCGGTTGGTTAGACAGTTGGATGGAAGAAAATGCATGGAGCCAAACAGGAGACGC TTCATTGAAAAAGGGTCACCCTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTAAACT CACATCATTATTTGCCTCCTGATTACAGTAATGAGAATTTTACAGCACACGAGTCTCCATCGAAACGATCTTCTTCTAAA GCTCCGAATCCAAGTCATTCTTATAGGGAGATCTCATCCTTTAATTCTCTGAAACTTCAAAAAGGAAAAGAAGCAGCTTC ATCACGAACCGCGGAGAACAGCCCACAAGCATTTTCTGCCTCCTCTAGGCTTGGAAGTAGTGCGAGGCGAGGTCCTTTTA CGCCTACTAAAAGTGAGTGCTCATTTAGTTTCTTCAGCGGCTACCCAGGTCATCCGAATTACATGGCGAATACTGAATCT TCTAAAGCTAAGGTCAGGTCACAGAGTGCTCCGAGGCAAAGGCTAGAGTTTGAGAGATATGGCGGCGCCACAACTAGAAG GTCATTGGTTCAGGGTCTTTGGGAAGCAGGGCCTAATTCAGATAGGGATTCGGATTTCAGAATAAAGGGCTATTCAGTTT CAACAACAAGCAGCTTCAACAGAATTGGGAGTACTAATTTAAGGTGA
Protein sequence (LotjaGi2g1v0147300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFFRRLFGGKKHPPPPALSDGSGSKSGPKDRRRSWSFAKNSTRGTSSNKSLSPLNHQFDPSTFSSPFTDSLDANKHAIA VAAATAAVAEAALAAAHAAAEVVRLTSGSGPVPAAQDRRRQAEETAAAAVKIQSAFRGYLARRALRALKALVKLQALVRG HIVRKQTADMLRRMQTLVRLQSRARANRVHMSDNMHSFKSSLSHYPVPGDHELSLRAFSTKFDGSSILQRCSSNANFRDI NLEKTRFGSGWLDSWMEENAWSQTGDASLKKGHPDDEKSDKILEVDTWKPHLNSHHYLPPDYSNENFTAHESPSKRSSSK APNPSHSYREISSFNSLKLQKGKEAASSRTAENSPQAFSASSRLGSSARRGPFTPTKSECSFSFFSGYPGHPNYMANTES SKAKVRSQSAPRQRLEFERYGGATTRRSLVQGLWEAGPNSDRDSDFRIKGYSVSTTSSFNRIGSTNLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 465 | 465 | 3.2E-138 | – | |
| MobiDBLite | 1 | 55 | 55 | - | – | |
| PANTHER | 1 | 465 | 465 | 3.2E-138 | – | |
| MobiDBLite | 39 | 55 | 17 | - | – | |
| SUPERFAMILY | 119 | 170 | 52 | 2.02E-6 | ||
| Gene3D | 122 | 186 | 65 | 1.1E-8 | – | |
| SMART | 124 | 146 | 23 | 2.9E-5 | ||
| ProSiteProfiles | 125 | 153 | 29 | 10.914 | ||
| Pfam | 127 | 146 | 20 | 2.9E-6 | ||
| SMART | 147 | 168 | 22 | 33.0 | ||
| Pfam | 149 | 166 | 18 | 0.012 | ||
| ProSiteProfiles | 149 | 176 | 28 | 9.944 | ||
| MobiDBLite | 299 | 375 | 77 | - | – | |
| Pfam | 354 | 430 | 77 | 1.7E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0147300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…