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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0150900 |
Transcript ID | LotjaGi2g1v0150900.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT1G12580.1 phosphoenolpyruvate carboxylase-related kinase 1; Swiss-Prot: sp|Q6F3A6|CDPKA_ORYSJ Calcium-dependent protein kinase 10; TrEMBL-Plants: tr|M9RTK3|M9RTK3_9FABA Phosphoenolpyruvate carboxylase-related kinase 1; Found in the gene: LotjaGi2g1v0150900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:54212046..54214266) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGCATGGCTGTTGCCAAGAGCAGCAGCTGCATTGAACCTTGTACCTCATACAACTGTTACAAAGTAGCAGGCCTGAC TGAAACCATATTAGATGCAAATTATACATCTAATTTGAAAGATCGATACATTCTCGGGGAGCAGTTGGGTTGGGGTCAAT TTGGCATCATAAGGGCATGCTCTGACAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTT ACTTTGGATGATCTGAGGAGTGTGAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCATCCAAATGTTGTTGATCT CAAGGCAGTGTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTCTGTGCAGGAGGGGAGTTGTTTCACCGATTAG AGAAGCATGGACGGTTTTCTGAATCGGAAGCCAGGGTTATCTTTAGGCACCTAATGCAGGTTGTCTTGTATTGTCATGAA AACGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGC CGATTTTGGGCTTGCAACCTACATAAAACCTGGTATTTACTTCCTTTTCACTTCACAGATTGTTAATCTTCTTTGCAATT TCCATTGCTTCTATCAATGTGTGGTGTTTATCTTCAAATATTGGGCTTTACTTAAGCAGGACAGAGTTTGCACGGGTTAG TCGGGAGTCCATTCTATATAGCTCCAGAGGTACTAGCTGGTGCATATAATGAAGCTGCTGATGTATGGAGTGCAGGGGTT ATTCTTTACATTCTGTTGAGTGGGATGCCTCCTTTTTGGGGGAAAACCAAATCACACATATTTGAAGCTGTTAAGGCAGC TGCCCTGAGATTCCCATCGGAACCTTGGGATCGCGTTTCTGAGTCAGCTAAAGATTTGATCAAGGGAATGCTGTGTACAG AACCTTCTCTAAGGCTCACTGCCCAGGAGGTTTTAGGTACGTTTACTTTATGTTTTTCTTCCCCCTCCATACTTTTAATG TCTATCTGTTGAAACTATTCTATTTAGATTATCAGGGGTGGTTAGTCGGTAAGAGAGCATTTCAAACTAGTAGAATTAAA AATTTCTTTGTAAACGATTATCACTATATTATTGGACACAAGATAACTTGAGTGGAGGAGCATTAAGAATATGCTTATAC TGCTAGTGCTTACCAAACCAATAGTCTGATAGTTACATTCATTTAGATTATGGTAAATGGTTTCATTACACTCAAATTTA TTAAAATAAAACAAAATAAAAGGGTTGTTTATGGTTTGATATGCACCTTTGCAGTCCGTCATTTATCATGTGCCTACTCA AAAATCCATTGTTTAGGACAGAAAAAAAGGGGAAAAGAAGAAGAACGGAATGAATTATCAAATGAGTGTAACTTCTAATC TTCATCTAAACTTTCCCTTTCTAGATCATTGCTGGATGGAAAGCAATCAAACAATTCCTGAACAACTAAGTGAACATAAT ACCCAAAGTTGTGAAGAAAGGGATGTTGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGACATCAGCTT CGGCACCGGATCACCTATTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTCGTCTTTTCTGGGAGAAC CAGTGACTCCTTGTTTAGTTTCTGGTGGGTTTTCCTTTCAGAGCATGGGCGATTCCCTGGAATTTGCTTCACCTGTTCCC TCAATGCTCAGCTTTTCATTTCTGAGCCCCAGTTCTGTTGTTGAGCAAAAGAGCTGTAAATTAGAGGGCTCAAATAACAT GTCAGATGTAAATGCAATTGCTAGAGGTATGTGTGGAGTGTTTCATTTTAACTGTCTTTACATTTGTACAGCTCCTTGAT CTGATTTTATTTGTTTTATTTGTAATTCATGGCAGAAACAAGCTTGGGGAAGTTGCTTTTACCACCAGACTCTCCCCATT GTGTTGGACATGATGTTAAAGAAATGGATCACAAGCCTGCAGAGAATAAAAGGGCTGGTGGGATGAATGGACATAGAGTA TTGGGAATCCACAGTAAGAGAAACAGGACAATTGGACTTGGTGATTGTGTACAACTTGACCTTGTGGTGAATGAATCAGT CATCCGTTGGTTATCTTGCACTCAACTGCCTACATCTTTGAGATCATCTCTTGTCTGCTGA
CDS sequence (LotjaGi2g1v0150900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTGCCAAGAGCAGCAGCTGCATTGAACCTTGTACCTCATACAACTGTTACAAAGTAGCAGGCCTGACTGAAAC CATATTAGATGCAAATTATACATCTAATTTGAAAGATCGATACATTCTCGGGGAGCAGTTGGGTTGGGGTCAATTTGGCA TCATAAGGGCATGCTCTGACAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTTTG GATGATCTGAGGAGTGTGAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCATCCAAATGTTGTTGATCTCAAGGC AGTGTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTCTGTGCAGGAGGGGAGTTGTTTCACCGATTAGAGAAGC ATGGACGGTTTTCTGAATCGGAAGCCAGGGTTATCTTTAGGCACCTAATGCAGGTTGTCTTGTATTGTCATGAAAACGGG GTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGCCGATTT TGGGCTTGCAACCTACATAAAACCTGGACAGAGTTTGCACGGGTTAGTCGGGAGTCCATTCTATATAGCTCCAGAGGTAC TAGCTGGTGCATATAATGAAGCTGCTGATGTATGGAGTGCAGGGGTTATTCTTTACATTCTGTTGAGTGGGATGCCTCCT TTTTGGGGGAAAACCAAATCACACATATTTGAAGCTGTTAAGGCAGCTGCCCTGAGATTCCCATCGGAACCTTGGGATCG CGTTTCTGAGTCAGCTAAAGATTTGATCAAGGGAATGCTGTGTACAGAACCTTCTCTAAGGCTCACTGCCCAGGAGGTTT TAGATCATTGCTGGATGGAAAGCAATCAAACAATTCCTGAACAACTAAGTGAACATAATACCCAAAGTTGTGAAGAAAGG GATGTTGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGACATCAGCTTCGGCACCGGATCACCTATTTG TGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTCGTCTTTTCTGGGAGAACCAGTGACTCCTTGTTTAGTTT CTGGTGGGTTTTCCTTTCAGAGCATGGGCGATTCCCTGGAATTTGCTTCACCTGTTCCCTCAATGCTCAGCTTTTCATTT CTGAGCCCCAGTTCTGTTGTTGAGCAAAAGAGCTGTAAATTAGAGGGCTCAAATAACATGTCAGATGTAAATGCAATTGC TAGAGAAACAAGCTTGGGGAAGTTGCTTTTACCACCAGACTCTCCCCATTGTGTTGGACATGATGTTAAAGAAATGGATC ACAAGCCTGCAGAGAATAAAAGGGCTGGTGGGATGAATGGACATAGAGTATTGGGAATCCACAGTAAGAGAAACAGGACA ATTGGACTTGGTGATTGTGTACAACTTGACCTTGTGGTGAATGAATCAGTCATCCGTTGGTTATCTTGCACTCAACTGCC TACATCTTTGAGATCATCTCTTGTCTGCTGA
Protein sequence (LotjaGi2g1v0150900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVAKSSSCIEPCTSYNCYKVAGLTETILDANYTSNLKDRYILGEQLGWGQFGIIRACSDRLTGEVLACKSIAKDRLVTL DDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVIFRHLMQVVLYCHENG VVHRDLKPENILLATKASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNEAADVWSAGVILYILLSGMPP FWGKTKSHIFEAVKAAALRFPSEPWDRVSESAKDLIKGMLCTEPSLRLTAQEVLDHCWMESNQTIPEQLSEHNTQSCEER DVGGSSFSASFMSRNQDISFGTGSPICDAQSPTFTCRSSFSSFLGEPVTPCLVSGGFSFQSMGDSLEFASPVPSMLSFSF LSPSSVVEQKSCKLEGSNNMSDVNAIARETSLGKLLLPPDSPHCVGHDVKEMDHKPAENKRAGGMNGHRVLGIHSKRNRT IGLGDCVQLDLVVNESVIRWLSCTQLPTSLRSSLVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 11 | 514 | 504 | 2.0E-243 | – | |
PANTHER | 11 | 514 | 504 | 2.0E-243 | – | |
SUPERFAMILY | 38 | 364 | 327 | 3.1E-88 | ||
CDD | 40 | 298 | 259 | 4.38847E-136 | – | |
ProSiteProfiles | 41 | 299 | 259 | 49.926 | ||
SMART | 41 | 299 | 259 | 6.3E-97 | ||
Gene3D | 42 | 127 | 86 | 1.2E-23 | – | |
Pfam | 43 | 299 | 257 | 2.6E-70 | ||
ProSitePatterns | 47 | 74 | 28 | - | ||
Gene3D | 128 | 332 | 205 | 4.3E-64 | – | |
ProSitePatterns | 161 | 173 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0150900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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