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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0150900 |
| Transcript ID | LotjaGi2g1v0150900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G12580.1 phosphoenolpyruvate carboxylase-related kinase 1; Swiss-Prot: sp|A5A7I7|CDPK4_SOLTU Calcium-dependent protein kinase 4; TrEMBL-Plants: tr|A0A151R850|A0A151R850_CAJCA Calcium-dependent protein kinase 32; Found in the gene: LotjaGi2g1v0150900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:54213200..54214266) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGCATGGCTGTTGCCAAGAGCAGCAGCTGCATTGAACCTTGTACCTCATACAACTGTTACAAAGTAGCAGGCCTGAC TGAAACCATATTAGATGCAAATTATACATCTAATTTGAAAGATCGATACATTCTCGGGGAGCAGTTGGGTTGGGGTCAAT TTGGCATCATAAGGGCATGCTCTGACAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTT ACTTTGGATGATCTGAGGAGTGTGAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCATCCAAATGTTGTTGATCT CAAGGCAGTGTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTCTGTGCAGGAGGGGAGTTGTTTCACCGATTAG AGAAGCATGGACGGTTTTCTGAATCGGAAGCCAGGGTTATCTTTAGGCACCTAATGCAGGTTGTCTTGTATTGTCATGAA AACGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGC CGATTTTGGGCTTGCAACCTACATAAAACCTGGTATTTACTTCCTTTTCACTTCACAGATTGTTAATCTTCTTTGCAATT TCCATTGCTTCTATCAATGTGTGGTGTTTATCTTCAAATATTGGGCTTTACTTAAGCAGGACAGAGTTTGCACGGGTTAG TCGGGAGTCCATTCTATATAGCTCCAGAGGTACTAGCTGGTGCATATAATGAAGCTGCTGATGTATGGAGTGCAGGGGTT ATTCTTTACATTCTGTTGAGTGGGATGCCTCCTTTTTGGGGGAAAACCAAATCACACATATTTGAAGCTGTTAAGGCAGC TGCCCTGAGATTCCCATCGGAACCTTGGGATCGCGTTTCTGAGTCAGCTAAAGATTTGATCAAGGGAATGCTGTGTACAG AACCTTCTCTAAGGCTCACTGCCCAGGAGGTTTTAGGTACGTTTACTTTATGTTTTTCTTCCCCCTCCATACTTTTAATG TCTATCTGTTGAAACTATTCTATTTAG
CDS sequence (LotjaGi2g1v0150900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTGCCAAGAGCAGCAGCTGCATTGAACCTTGTACCTCATACAACTGTTACAAAGTAGCAGGCCTGACTGAAAC CATATTAGATGCAAATTATACATCTAATTTGAAAGATCGATACATTCTCGGGGAGCAGTTGGGTTGGGGTCAATTTGGCA TCATAAGGGCATGCTCTGACAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTTTG GATGATCTGAGGAGTGTGAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCATCCAAATGTTGTTGATCTCAAGGC AGTGTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTCTGTGCAGGAGGGGAGTTGTTTCACCGATTAGAGAAGC ATGGACGGTTTTCTGAATCGGAAGCCAGGGTTATCTTTAGGCACCTAATGCAGGTTGTCTTGTATTGTCATGAAAACGGG GTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGCCGATTT TGGGCTTGCAACCTACATAAAACCTGGACAGAGTTTGCACGGGTTAGTCGGGAGTCCATTCTATATAGCTCCAGAGGTAC TAGCTGGTGCATATAATGAAGCTGCTGATGTATGGAGTGCAGGGGTTATTCTTTACATTCTGTTGAGTGGGATGCCTCCT TTTTGGGGGAAAACCAAATCACACATATTTGAAGCTGTTAAGGCAGCTGCCCTGAGATTCCCATCGGAACCTTGGGATCG CGTTTCTGAGTCAGCTAAAGATTTGATCAAGGGAATGCTGTGTACAGAACCTTCTCTAAGGCTCACTGCCCAGGAGGTTT TAGGTACGTTTACTTTATGTTTTTCTTCCCCCTCCATACTTTTAATGTCTATCTGTTGA
Protein sequence (LotjaGi2g1v0150900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVAKSSSCIEPCTSYNCYKVAGLTETILDANYTSNLKDRYILGEQLGWGQFGIIRACSDRLTGEVLACKSIAKDRLVTL DDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVIFRHLMQVVLYCHENG VVHRDLKPENILLATKASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNEAADVWSAGVILYILLSGMPP FWGKTKSHIFEAVKAAALRFPSEPWDRVSESAKDLIKGMLCTEPSLRLTAQEVLGTFTLCFSSPSILLMSIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 295 | 286 | 1.1E-186 | – | |
| PANTHER | 10 | 295 | 286 | 1.1E-186 | – | |
| SUPERFAMILY | 38 | 295 | 258 | 4.05E-85 | ||
| CDD | 40 | 294 | 255 | 2.32433E-134 | – | |
| ProSiteProfiles | 41 | 306 | 266 | 48.767 | ||
| SMART | 41 | 299 | 259 | 1.0E-93 | ||
| Gene3D | 41 | 124 | 84 | 2.1E-100 | – | |
| Pfam | 43 | 294 | 252 | 6.7E-69 | ||
| ProSitePatterns | 47 | 74 | 28 | - | ||
| Gene3D | 125 | 294 | 170 | 2.1E-100 | – | |
| ProSitePatterns | 161 | 173 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0150900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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