Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0154700 |
| Transcript ID | LotjaGi2g1v0154700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial metalloendopeptidase OMA1; TAIR: AT5G51740.2 Peptidase family M48 family protein; Swiss-Prot: sp|P36163|OMA1_YEAST Mitochondrial metalloendopeptidase OMA1; TrEMBL-Plants: tr|A0A151T455|A0A151T455_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0154700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55254075..55260410) extracted from Lotus japonicus Gifu genome v1.2.
CGGTGTTGGTCTTCTCACGTGTTTCTGTGTTTTTCTCTGTCTAGATCCTTCGAGTTCTTTGCGAACTCTCCACGTTCTAC CGCTTCCATTCACCTACATGTTTCGATTCTCCACTGACCCATGAATTTCGCACTGTTCTAATCCGCTAAATTTCATCATC TTCTTCTTCAGTTTCGATTTTCAGTTTTCGCCATCATCATGTACAGAAGAGCAAAGATTGCTTTCGATGGTTTTCGAAGC TTGACTTTCAGGGTTGCTCCTCAAAATCCATCTTTTCGATGTAACTCGAGGATTTGGCCATCTGGGTATTCGAATTCATG CTCAAAAGGAGCTAGCTCTAATGGGTTCTCTTCGTTTTCTTCAATTTCTCAGAGATTAAGCACAAGAGGTGTTGGTGTTA ATGGGGTTAATGGGGTTAACAGGAACTTTAACAATCTGTTTCTTTCTGGGGGTAGGAGATTTTACTATGTGGATCCTTAC AATGTGAAGCATTTCAAGCCAAGAGGGCCAAGGCGATGGTTTCAGAATCCTAGACATGTTTTCATTGTTGTGGTGGTTGG TTCAGGTGTTTTCATCACTTTGTATTTTGGGAATAGGGAAACAGTTCCTTACACGAACCGAACTCATTGGATTCTGATGT CTAGACCCATGGAGAGGAGGCTAGGGGAGTCTGAGTTTGAGAAGATGAAGGCAGGTTTTAAGGGGAAGATGTTGCCTCCT ATACACCCGGAAAGTGTGAGGGTGATGATGATAGCTCAGGATATCATTGGTGCATTGCAGAGAGGGTTGAGGAAGGAGAA TGTGTGGAGTGATTTGGAGTATGCATCACAGAATACCATGTTGGGTGAAGAAAGTGGGAGGGAGGCATTGCATGTGCTGG CTGAAAATGAAGGGAAGATTGAAGGGAAGTGGCATAGGGAGGATGAGATTCTTGATGAGAAGTGGGTTCAGCAGAGTAGG AAAAAAGGTAAGGAACAAGGGAAAGAGCCTAACACTGCTCATTTGGATGGTTTGAATTGGGAGGTTTTGGTTGTGAATGA GCCTCTTGTTAATGCCTTCTGCTTGCCTGGTGGGAAGATAGTTGTATTTACTGGTTTGCTTGAGCATTTTAGAAGTGATG CAGAGATAGCAACTATTATTGGACATGAGGTATAACTGTGCTTGGTTTAAGGCTTAAGTTTACTAATTGTTTTTTGTTGT TTAACATATCTTGGAGACCCATTGCTTACACATTAGATTAGAACTTGCTAATTTATTATTTTTCACTTGGTGGGGTATAG CTTTTCTTGTTTCTTATTGTTGTATATGCAGACATATCAACTTATGTGGGTCTTCCTGTTAATTAGGTTGGACATGCTGT GGCTCGACACAGTGCTGAGGGGATTACAAAGAATCTGTGGTTTTTTATTCTGCAGTTGATTCTTTATCAAATTGGCGTTA TGCCTGATCTTGTCAACACAATGTCATCGCTTTTATTACGGCTACCTTTCTCGAGACGGTATACATCATTCATTCTCTCT ATTTCTAACCACTTGATTTCTTGTGCTGTTCTTTGATTGTACTAGAGTCATTTGAGGGAAACATAGAGTTTGTCATGAAA TGTTGAAATAGATATTCATAAAACAGTGCTGCTGCTCTGGTTTTCCTAATGAATTTCTATATTCCTGTCTGTAGACCAAA TGTAGCTAAAAGCTTTGTACAATTTTCCATCAATTTGACTGTTAGAACTTGAGTACTTGTATTTTTCTTAGATGTGAAAT TTAATTTGAGTTAGATATCAATTACTATTCTATGAATAGTTAGAGTTTCTGTTACTTTACATGAAGACTCTCATGTCCAA TAAACATTAGGTATCTATATGCAGTCTACTCTCAGTTTGGTTAAGCTTATGAAAATAACATATGACCTACCTATAAGCTA CTTTCATCTTATTCTATTCGCCTTCTTTGACTAGCTTATCAATAAGTGCTTCTACCAAATATAAACTCTTTTGACTTATT CCAGCAAGCTTCTCGATTAAGCTTATGGATAAGGGCTTACGTGGTAAGTATTTATGGGCATAAACGCTTGCTTCTCAATT AAGCTTATGAATACGGGCTTACATGATAAGTATTCGCTTAATTATTCTGTAACAGGCACACCCTGAACACAATTTCTGGG AGTGAGCTAGCCCAAACCAAACTAATTCATTTGTTTAAGAATGCTCGAACGTTCTTGGAGTTGACTTTATGCCGTAGAAT ATCTTGAATTTGAATCATATTCTATGTTAGATTTAGAATTTGAATCATATTCTTTGTTGGTCTGAAGTAGTTTTGATGGA TTTCATGAGTCTGACATGGCACTTGTGAGATTTCATCTGATGGACAAGTTATTTTATATTTGGTTTTTTTCTGTGGCTGG AGTGTGGATTGGTCCAAAGTGAGAGGGGCATCCTGAGCGATGATTTTGTAGAATTTCCTATAAAATTTTCATTTTTGTGC TGATAGTTTAGTTCATACTGCTTTGTATTTGTATTTATATCAATTTCTTATTATTCATGTTTGACATGGCTACGTTCGTT CATTCTTGAGTGCACTTGTCGTTTGGCATGTACTTTAATTACTTTGCAATGTCTACGCTGGTCCTTTCTGCCTGTCACTG TTGTCTTTTCCATTCAATTCATACTTTTATGATTGTTTTCAAGCTGCTTGTTCTTGTTCTTCATGGTAGATTTTTATATT GAAATGAAAAATTGTTGTAATTATAATGTGATTTTTTATGTAAACTTTTTTTGGTTAGTTTTTTAAGCTTAACCCAAGTT ATTTTCTATTTTTCAGGATGGAAATGGAAGCCGACTACATTGGGCTACTGTTAATTGCATCAGCTGGCTATGATCCCCGG GTGGCACCTAAAGTCTATGAGAAATTGGGAAGAGTCACTGGCGATTCTACGCTTGGAAATTATATCTCTACTCATCCATC TGGAAAAAAGAGAGCAGAATTGCTGGCACAAGCTAAGATAATGGAAGAAGCACTTACTATATATAAGAATGTTAGGTCAG GACGTGGGGTTGAAGGATTTCTTTAGGACTTCAGTCTCACCACTCTACAAAATACAAAGCGACTGTTCTTGAACTTGTCT AGGATGTTTTTTTCTTTTTCAATTTAATTTTGTCAATATTTTGGATGGAACTTCCTATATTTGTGTTCAACTGTTCATTA TGTGGATTAGCATCTATTAAAGTGACAATGCCCTCTCCACACTTCTCTGAATCCAAAGATTCTGTTGTACATTATGCTTT TGTACAGTTAATACTCTCACCTCTTTAGAGGACATAATAATAAACTAATAAGAAGTAAAATGTAATTTTTTGAGCATAGT AATGATGATATTACCTAACACACTTATTTCTCAATGGAGTAAATTCAATACTCTTTCTTCATTGCTAACCTCTGAACTTT TTAATTTTTGTACATGTCAAGTTTACTTTGTGCATGTTTGGTTCTCATTGGCGAACCTCTGAGTCGAGTATAGATGGACA AACGCGCAGAACCGGCTACTTTTAGATATTTGGGTGCTGCCATCAAGAATCGATCACATTCCCATAATCAACTTTGGGGT CAAGCTGGAGAGTCTAGCTTCTTTGACGGGCTACAATCAATTCTTGTAGCTGAAAGGTCAAATTTATGGAGTGTGTTCAG GTATACCCTTTACTCGTCCTTCCGTTTACAGCTGAATGGTTGGAAAGGCTATCCTGAAAATGTTGGATTCAAATTTTTTA GAGGTGAACTTAGTCTTTAAGAAGATCAATGTGCTAGTATTAGCTTTCAGTATGGGTTTTTCGGTCTGGATTTTCTTCTC ATTACTTATTTGCCTATACTGTCAAACTTTAAACTTCTTATTTGCCTATGCTGTTGTATCTGATTACTTATTTTCCTATG CTGTCTTGGAAGTTAATGTTCTTGTGGTGCAGGCATTGTCTCAGGTGCCAATTTATGTGTACCAGTGCATTTGCTTCTGT TACTTTTAACCATTGGAATTACATGATTTTTCTATACATTGCTGATGAAGAAGCATTATTCCTGAAAATTCTTGATAATG TCTCTCCACTCCAGTATGTATCCCTTTCCATTGGTCAATAGTAGGATATGGACCTCAGATGAATGTTTTCAGTTTGCTAT TCAATTTCCAAATAGGGAAAAGCTTCTTGCCAACACCTTTATATAAGTAGTTTAGAATCCTTTGTGTATTTGATGAATGT TTGATTGGCAAGAGAGTTTGGAGAACTTTCTATGTGATTTTAGTTGGTTTGGTTTGTCAAAGAGGGCAAGGCTGTTTTGT CCGTGAGCGCAGTATGGTTATGGTAGTAGTATGCTTATATAAGTGAGTTGATTCACCTATTCTGCGGATTAAGTTGATTC GGGTTGGACCCCTTTTTTCCTTTTCATATTTTTTTGTAGTCTTTTTCTCTGTTTTTTGCATTTTCAATATTTTCTTTTTA ATTCTTTTACATTTTATATGATTTTTGAAATATTTTCTAATTAAGGTGAACCAAGGATTTGGCCACCTCTCCCAGCTCGT AAAATCCATGACAGCTTGCCTCAGTACATAGTTTAACCTCCAAGGTCTGTCATTACAGATTTGATTTTTTCGCCATCTCC ATGGCCACCAAAGAACGGCCATGGAGATGGCGAAAAAATCAAATCTGTATGATTTTTTTGCTGCTGTATGATTTTCAGAA CCAGTTCTGGAATGGTACATGAACATCAAGAGGTGGCAGGCTCATTCCAAAATGCATCCAGAAGTTGCGTGAACCCGGGC ATGTGCGAAACACATGATGAAGGTCCTTTGATGATGAGAACAGTTAGCGTTACTGCTGACATGATTTTGTTGCCGTTTTG CGTTTGTGGGTAGTGCCTCTTTTCCTATGAGCCAAAGGAAAAATTTGATTGGCAGGTAATTAATTATATTTGTAGATAAC TCTGGTGTAGATATCATTTTGGGTATTTTACTGATAGGTAAAAGCATCCCCTTAGCTTAGTTAGAATAGTTAGTAAAGGG TTAGCCTATATATAAGGGAGTGTTGAGAGGGTTTAGGTATCCTTGCTTCCTTGGGGATCATTTGTGTAATTGATTGTGGA GAGTCCAGGTTCTCTCGAATAACCTGGGTTACTCTCAGTAATAACAAAATTTCCTATCTCTTTCTTGGCTGATTCTATCA TTTACCTTTTGCAAGGGAGCTGCTTCGGCATGGGAGTCAGGTTTGCTAATATTTTCTAATTTATGGATAACACGCCATTG CTTTGGTTTTCTTCTTTTAGGTATCTGTTTGTCATTTTTCCATTTCAGAATTATGCTTGAACTTTGAACTGTGAACTGAA ACTGCTTTTGATGTGCTTTTCTTAACGCTAAAAATGAAAGTTTGAGCTCTAATGATACTGTTATTTGTTCTCACATCTTT CTTGACATCCTTTCTTCAGGTCAAGCATCCTGAGGTTGCACAATTTCTAGGAGGGCACCTATATGCGTATTCAGATACAA TGAAGCTTCATGATTATAAAGCTGATTCTTTTGTGTACAAATTTTAAAATAGTCAGCGGTGATATTTATCTATATATCTA GTATAAGCATATGCAATAATTTTCAAAAATAAAGATCTGAAGAATCAAACATGATAATAAAGCCTAATAAGGCTTAATTG CACTTTTGGTCCCCCACGTTTACCCTTTGTGCGGTTGTCGTCCTTAAAGTAATAAAATTGCAAAAAAACGTCCCGTACTT TGTCGAACGGCAGCACTTTTGGTCCCTCATCCATATTCCGTCCAAATTTTAACAGTTTCTGTAAAAAACTAACGTTCTCA GGTTTTCCAGAAACTTTTTTTTTATAAGCTCTTCATCTTCTTCATAACCTTCATCTCTCAAACCCAGGAAATAAAAACCA CAACCATCTCCTTTAAACCAACACCCTTCCCTCAACCTCTAAAACTTCCTACAACATAGTAAACCCTTAATCACCCACAC CATTCTCCCTCTTTAATCTCCATGCATGAATAGCTTTTCCTTCCCCCACTGAGAGCAAGAGAAACTGAAATTCTAGAGGG GATTCTTTTCAAGATGACCCAGATATGCAAAATGAGAAATCAACATAGACAGAGACACAAGAAATAATTTTAATTTGCAG AAATGGAGGGGAGGGTGAAAGGAACATAAAAGTAAAAAAAAACCCAAATGAACTTGTGGAACAGAGAAGTTTGAGAGGAA CCAAAAGAATTAACCAAGGAATAACGATTGGTGGGCAAGCATCCAGTGAATTGCAATCACAAATTTCAGATTTGCAATGC AGATAAAGAAAAAGGG
CDS sequence (LotjaGi2g1v0154700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAGAAGAGCAAAGATTGCTTTCGATGGTTTTCGAAGCTTGACTTTCAGGGTTGCTCCTCAAAATCCATCTTTTCG ATGTAACTCGAGGATTTGGCCATCTGGGTATTCGAATTCATGCTCAAAAGGAGCTAGCTCTAATGGGTTCTCTTCGTTTT CTTCAATTTCTCAGAGATTAAGCACAAGAGGTGTTGGTGTTAATGGGGTTAATGGGGTTAACAGGAACTTTAACAATCTG TTTCTTTCTGGGGGTAGGAGATTTTACTATGTGGATCCTTACAATGTGAAGCATTTCAAGCCAAGAGGGCCAAGGCGATG GTTTCAGAATCCTAGACATGTTTTCATTGTTGTGGTGGTTGGTTCAGGTGTTTTCATCACTTTGTATTTTGGGAATAGGG AAACAGTTCCTTACACGAACCGAACTCATTGGATTCTGATGTCTAGACCCATGGAGAGGAGGCTAGGGGAGTCTGAGTTT GAGAAGATGAAGGCAGGTTTTAAGGGGAAGATGTTGCCTCCTATACACCCGGAAAGTGTGAGGGTGATGATGATAGCTCA GGATATCATTGGTGCATTGCAGAGAGGGTTGAGGAAGGAGAATGTGTGGAGTGATTTGGAGTATGCATCACAGAATACCA TGTTGGGTGAAGAAAGTGGGAGGGAGGCATTGCATGTGCTGGCTGAAAATGAAGGGAAGATTGAAGGGAAGTGGCATAGG GAGGATGAGATTCTTGATGAGAAGTGGGTTCAGCAGAGTAGGAAAAAAGGTAAGGAACAAGGGAAAGAGCCTAACACTGC TCATTTGGATGGTTTGAATTGGGAGGTTTTGGTTGTGAATGAGCCTCTTGTTAATGCCTTCTGCTTGCCTGGTGGGAAGA TAGTTGTATTTACTGGTTTGCTTGAGCATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGGACAT GCTGTGGCTCGACACAGTGCTGAGGGGATTACAAAGAATCTGTGGTTTTTTATTCTGCAGTTGATTCTTTATCAAATTGG CGTTATGCCTGATCTTGTCAACACAATGTCATCGCTTTTATTACGGCTACCTTTCTCGAGACGGATGGAAATGGAAGCCG ACTACATTGGGCTACTGTTAATTGCATCAGCTGGCTATGATCCCCGGGTGGCACCTAAAGTCTATGAGAAATTGGGAAGA GTCACTGGCGATTCTACGCTTGGAAATTATATCTCTACTCATCCATCTGGAAAAAAGAGAGCAGAATTGCTGGCACAAGC TAAGATAATGGAAGAAGCACTTACTATATATAAGAATGTTAGGTCAGGACGTGGGGTTGAAGGATTTCTTTAG
Protein sequence (LotjaGi2g1v0154700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRRAKIAFDGFRSLTFRVAPQNPSFRCNSRIWPSGYSNSCSKGASSNGFSSFSSISQRLSTRGVGVNGVNGVNRNFNNL FLSGGRRFYYVDPYNVKHFKPRGPRRWFQNPRHVFIVVVVGSGVFITLYFGNRETVPYTNRTHWILMSRPMERRLGESEF EKMKAGFKGKMLPPIHPESVRVMMIAQDIIGALQRGLRKENVWSDLEYASQNTMLGEESGREALHVLAENEGKIEGKWHR EDEILDEKWVQQSRKKGKEQGKEPNTAHLDGLNWEVLVVNEPLVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGH AVARHSAEGITKNLWFFILQLILYQIGVMPDLVNTMSSLLLRLPFSRRMEMEADYIGLLLIASAGYDPRVAPKVYEKLGR VTGDSTLGNYISTHPSGKKRAELLAQAKIMEEALTIYKNVRSGRGVEGFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 113 | 113 | - | – | |
| PANTHER | 5 | 448 | 444 | 1.1E-143 | – | |
| PANTHER | 5 | 448 | 444 | 1.1E-143 | – | |
| TMHMM | 114 | 131 | 18 | - | – | |
| Phobius | 114 | 131 | 18 | - | – | |
| Phobius | 132 | 333 | 202 | - | – | |
| CDD | 250 | 433 | 184 | 3.02364E-72 | – | |
| Pfam | 268 | 425 | 158 | 1.1E-29 | ||
| Phobius | 334 | 361 | 28 | - | – | |
| Phobius | 362 | 450 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi2g1v0154700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…