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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0163700 |
Transcript ID | LotjaGi2g1v0163700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kunitz trypsin inhibitor; TAIR: AT1G17860.1 Kunitz family trypsin and protease inhibitor protein; Swiss-Prot: sp|O82711|PIP22_PEA Kunitz-type trypsin inhibitor-like 2 protein; TrEMBL-Plants: tr|I3SA98|I3SA98_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0163700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:57105821..57108885) extracted from Lotus japonicus Gifu genome v1.2.
TAAACATGGACGTGGAACGGACACATCTGAACTTATCCTTTCACTTAATTAACAGCCAATTAAGTGTATAAATAGAGGTT AGAAGCAGCAAGAGGAATGGACATAGAAAAGCATGAAGCCTGCAATATTACTCGCCCTCTCTTTCCTTCTCTTTGCCTTG ACCACCAACATTCCATTAGCCTTCTCACAAGATGATCATGAAAATGTGTTGGACACAGGTGGCCGCGAACTTATAGGAAT AGGTCCTGGATACTACATCATGCCAGCTTTCTTCGGCGCGGCAGGTGGCGGAGTGTGGCCGGGCGAAACTGGGAATCAAA CATGCCCAGTTACTGTACTGCAAGATTATTCTGAGGTTGTCAGTGGCAAGCCAGTGAAATTCTACACTGGGACTAGGCCT GGTTATGTCTATACAGGCGCGCCACTCGATATTGTATTCGGCGAAAATCCTGAGTGTACTGAATATTCCTCCAAGTGGGT TTTTGTTTATGATGATTTCCCTAAAGCATGGGTGGGTATTGGTGGTGTTGAAGATCATCCTGGTAAAGATATCCTGAGTG GTAAGTTTAAGATTGAGAAATATGGTGATTTTGGGTACAAGCTTGTGTTCTGTCCCAAATTCACTGCTCCACCTGGTGCT TGTTTTGATATTGGAAGGTTTGATGATGAGAAGGGAAGGCGTCTGGTTCATGCTGAAGAAGGTGATCGTCCCTTTGAAGT TGTGTTCGTTAGGGCTATTGATGATAGTGGAATCAGGTCCATCGATTAATTTCAATCAAATTCTACATGTAGATATTGTT GAATAACTAGTATGATACCTCTGCTTGGGATGCACCCACGGATTGTACTTATCCTCTACGTATAAGTGCAAATAATAAAT TGTTGTTTCTTTTTCAATCTTATACGGTTGGTGCTGTCAAAAAAAATCTTAGATGGTTGGATATTGATGTATGACATGCA TGAGTAGCTGTTGCACACCGATGCACGAATAAATATCAACCGCATGATCAATTCATTCACTCCATCTTGTTTTCTTTGGT AAGCTTTAACTCCATCTGAATACACACTCATGCTTGTGGTTACCATCTCTTCTTAAGCTTGTAATGGACTATGCTGGTTA TATGTTGTACGTTGTGCTCCCCTCTTGTATTAGATATCTTGAAAGTACTCCTTACGGATACTGTCTTAGCAAGAATTTTC AGAGAAAGCTGCTTCTGTTGTGTGGGGAGGGGGAATTCGGTCCGCTTCTGGATCGATCCTTGGCTCGATGCTACCCCGCT TCATGTCAGGTTCCCTCGCCTCTTTGCCCTTTCGATTAATAAAAGGGCTTCTGTTAATGAGCTGGGCATTTTTCTGAATG GGCGCTGACAATGGGATTTTGGTCTTCGTAGGAGACTTTTTGATTGGGAACTCGTTGGGTACAATGAGCTGGTTGAGGCG CTGAATTTGATTTGTCGCAGTGACGATAAAGACACAATTTTGTGGTCTGGTGCCTCGGATGGATTGTTTAGTGTAAAAAG CGCATATGCTGCAGCTGAAATAAGAATTTTTGGTGCTGCTGTTGGGGAACTGTACAAGCTAACCAGTAAGATAATTCCTC CCAAGGTCGCTCTTTTTGTTTGGAAATTAGTAGAGAATAGGGTGGCTATAAAGGAAAACTTGTTAAAGCGTGGTATGGTC ATCGATAATGGAGGTGTTGCGACTCATGCGGCTTGGGTCTGGAAACAGTGGGTCATTTTGCGCTGGCATGCAGGGTGTCT TTGAGATTCTGGAATGAAACGATGTCCAGGGAAGAGATTCAATGGTGCATCCCGGGCTCTTTCAAAGCTTTGCTGGATGA GTGGCCATCTTTGCGCAATAAATCAGATCGGGTTTTTTGGGACCTGATTCCGTGTGCGGTGGCGTGGTCAGTATGGTCGG CACACAACGAGCAAGTTTTTCAGCAGAAGGACTTTGTTTTCGAGACTATCTGGGACCTTCGCCTAATGAGAGTCATGTGG TGGGTGAAGGCTTGGTGGAAGGAGTGCCCATACACCGCAATTGATTTCACCCAACATTTTGAGAAGTTAAGGTCAAAGGC AAAAGAAAAAAAAAGTGAGGAATTGTATGTGGCGACCCCCCCCCTAACACTCTTAAATTCAATGTGGATGGTTCTGCGCC TGGGTTGCCGAGCGTTAGTCGTGTCGGGGTAGTCTTGAGAAATTCGGTTGGTGACTCCTTGGGTGTTTTCTTATTGGCGA CAGGGATCCTTTGGGCTTATCAATCAGAAGTAAAGGCCATCCATCGAGCTTTGTCTTTCTGTAAGGAATTCTCCTTTTCG CATGTCTTTATTGAGAGTGACTCGACTCCTGCAGTGGGCTGGGTGAACCGTAAGGAGAACAGGCCTTGGGCCCCTATTAA ACGACCTCAATTCCATTGATAGGTTGATAAGGGAGGTGGACTGTTTGGGTGTTGCTCATGTTTATAGAGAAGCCAATTCA GAGGCTGATGAAATAGCTAAATTGGGTTGTAGAGAGGATCCGTTGTGGGAAATTTTGGTCTAATGCTCTCGGGTGTGCTG CTTCTGATGGCTTAGTTATGATCGCTTTTGTACCTCTGTTATGGATAGACAGTTTTGGATTCTTAGAGGTGCTGTTGGTT TGGTCTTCCTCTGGCCTGGGCATGTTTGCTGCTCTCCACCCCCTGCCGCGTGGTTGTTGCCTGCCTGCCTATCTAGTGTG ATGTTTTCCTGCTGTCTTGTTTTTAGCAGCTTCTGTTTTTTTTCTTCTGCTACGTTAGCTGCACCAATTTGGGGTGTTGC CTTGACTTTAGTTTTCTGTGTCTTATGTCTTCTAGTTTTAGTTTTTCTCCCTTTCTTTTTTGCTCTTCTGCTGTACTTGA TTCATGAGGCTCTCTCATGGTACTATCTATTCAAAAATATGTTTTGTTTCCAAAAAAATAAATATGTTGTACGTTGTAAT TCTCTAGTTTGTAGCAAAACCTCTATGTATTTCGGTTCTAGCACACCTTGTGTTGGTCTTAAAACACAACTATATTGCTT ATTAAAAAAAACTCGTGTTTGTGGT
CDS sequence (LotjaGi2g1v0163700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCCTGCAATATTACTCGCCCTCTCTTTCCTTCTCTTTGCCTTGACCACCAACATTCCATTAGCCTTCTCACAAGA TGATCATGAAAATGTGTTGGACACAGGTGGCCGCGAACTTATAGGAATAGGTCCTGGATACTACATCATGCCAGCTTTCT TCGGCGCGGCAGGTGGCGGAGTGTGGCCGGGCGAAACTGGGAATCAAACATGCCCAGTTACTGTACTGCAAGATTATTCT GAGGTTGTCAGTGGCAAGCCAGTGAAATTCTACACTGGGACTAGGCCTGGTTATGTCTATACAGGCGCGCCACTCGATAT TGTATTCGGCGAAAATCCTGAGTGTACTGAATATTCCTCCAAGTGGGTTTTTGTTTATGATGATTTCCCTAAAGCATGGG TGGGTATTGGTGGTGTTGAAGATCATCCTGGTAAAGATATCCTGAGTGGTAAGTTTAAGATTGAGAAATATGGTGATTTT GGGTACAAGCTTGTGTTCTGTCCCAAATTCACTGCTCCACCTGGTGCTTGTTTTGATATTGGAAGGTTTGATGATGAGAA GGGAAGGCGTCTGGTTCATGCTGAAGAAGGTGATCGTCCCTTTGAAGTTGTGTTCGTTAGGGCTATTGATGATAGTGGAA TCAGGTCCATCGATTAA
Protein sequence (LotjaGi2g1v0163700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPAILLALSFLLFALTTNIPLAFSQDDHENVLDTGGRELIGIGPGYYIMPAFFGAAGGGVWPGETGNQTCPVTVLQDYS EVVSGKPVKFYTGTRPGYVYTGAPLDIVFGENPECTEYSSKWVFVYDDFPKAWVGIGGVEDHPGKDILSGKFKIEKYGDF GYKLVFCPKFTAPPGACFDIGRFDDEKGRRLVHAEEGDRPFEVVFVRAIDDSGIRSID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
PANTHER | 1 | 210 | 210 | 3.2E-64 | ||
Phobius | 1 | 3 | 3 | - | – | |
SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
SignalP_EUK | 1 | 25 | 25 | - | – | |
Phobius | 1 | 25 | 25 | - | – | |
PANTHER | 1 | 210 | 210 | 3.2E-64 | – | |
Phobius | 4 | 16 | 13 | - | – | |
TMHMM | 5 | 25 | 21 | - | – | |
Phobius | 17 | 25 | 9 | - | – | |
Phobius | 26 | 218 | 193 | - | – | |
Gene3D | 27 | 214 | 188 | 4.0E-53 | – | |
SMART | 31 | 209 | 179 | 1.2E-34 | ||
PRINTS | 32 | 61 | 30 | 1.7E-7 | ||
Pfam | 32 | 206 | 175 | 3.1E-31 | ||
CDD | 32 | 207 | 176 | 8.75565E-42 | ||
SUPERFAMILY | 32 | 207 | 176 | 4.11E-42 | ||
TMHMM | 40 | 62 | 23 | - | – | |
PRINTS | 71 | 91 | 21 | 1.7E-7 | ||
PRINTS | 151 | 170 | 20 | 1.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Endopeptidase inhibitor activity | Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides. |
Expression pattern of LotjaGi2g1v0163700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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