Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0163900 |
| Transcript ID | LotjaGi2g1v0163900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT4G23130.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 5; Swiss-Prot: sp|Q3E9X6|CRK21_ARATH Cysteine-rich receptor-like protein kinase 21; TrEMBL-Plants: tr|A0A0R0FSR3|A0A0R0FSR3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0163900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:57183694..57185319) extracted from Lotus japonicus Gifu genome v1.2.
AAGATTTTAAGAAGTTTGACGACTCTGTTTAACTATTCAATTTTTATTTAGTTGGTAATGAAAGTGCAACTGTAGAGCCA TTACAATTCGATTTTGTCGTAATTCAAGCAGCAACTAACAACTTTTCTGAGGACAATTACATTGGCAAAGGCGGATTTGG AAAGGTTTATAAGGTGAGAAAATGTGATAAATTTATTTTTATACTTGTTTATCACAATTAATATTTAATAAAATTTCAGG GTATTCTTCATAATGGACAACAAATAGCAGTTAAGCGACTTTCAGAAAGTTCTAAGCAAGGTGTTGATGAGTTCAAGAAC GAAGTGTTATTGATAGCGAAACTTCAACATAAAAATCTTGTGGCATTCGTTGGCTTTTGTCTTGAGGAACAAGAAAAAAT ACTCATTTACGAATATGTGCCAAACAAGAGCCTTGATTACTTTTTATACGGTTTGGAACACTTCACCTTATGCTTTTTAC TCAATCCATTTTTAGTGTCATGCATAATTTATACATGTTTTTAAAGAACTTGATTTGATTCAGTTAATTGATTGGAAGAC ATGTTTCGATTAAATAATTTTGTAGATTCTCAAGTTGAACATCCATTAAGTTGGGATGAACGTTATAATATTATTGGAGG GATTGCTCGGGGAATTGTTTATTTACATGAGCATTCGAGGCTTAAAGTCATACACCGTGATCTGAAACCCAGCAATGTTT TGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTGTTGAAATAAATCAAGACCAAGAGAAT ACAAATAGGATTGTTGGAACATAGTAAGTTTCAAGCACTCATCTCTATCTTTCCCTTTCTAACTTCTTCACTAGTTATAT TTTAATTAACTGATCTGACATTCAATTTGTCCTTTGTTTTGTAGTGGCTATATGTCTCCAGAATATGCAATGCTTGGGGA ATTTTCTGATAAATCAGATGTTTTCAGTTTTGGAATCATGATTTTAGAGATTGTTACTGGAAAAAAGAAACTAAGTTCTT ATGAACCACATCATATTGCAAATGGTCTCTTGAGTTATGTGAGTATAATAGCAATCGATAGTTTTCATGTATCATTCATT TTAGGCCATATATTTATTGTACACTCAGATTAATTTGCAAGTGTGAAGTTAATAGTTCTAATATTTTATTTGATAAATTG TTACAGGTATGGAGAGAATGGAAGGATCAAACACCTTTAAGTGTATTGGACCAAAATATCAAAGAAAATTACTCTCAAAC TGAAGTCATGAAATGCATTCAAATTGGTCTATTATGTGCTCAACATAACCCTGATGCAAGACCTACAATGGTGGAAGTTG TTTCATATCTTGGCCGTTATTCAGCTAATATGCCAACTCCACAAGAACCTACAGTTTTCTTACGCACTAGGATGGAACCG ACAGCATTTCCACAAAGACCAAGTTCTAAACAATCTGAGAGTGATTCCATCAATGAAATGTCTATAAGTAATTTTCTTCC CCGGTAGTAATTGGTTGATTTTCGTTTGAAGTGTCGTTCTTGAGAACAACTCAAGTGGTATGTATTTTGTATAAATGAAT TAAGGCAAAGAATACTTGTCATTTAT
CDS sequence (LotjaGi2g1v0163900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTGTTGAAATAAATCAAGACCAAGAGAATACAAATAGGATTGT TGGAACATATGGCTATATGTCTCCAGAATATGCAATGCTTGGGGAATTTTCTGATAAATCAGATGTTTTCAGTTTTGGAA TCATGATTTTAGAGATTGTTACTGGAAAAAAGAAACTAAGTTCTTATGAACCACATCATATTGCAAATGGTCTCTTGAGT TATGTATGGAGAGAATGGAAGGATCAAACACCTTTAAGTGTATTGGACCAAAATATCAAAGAAAATTACTCTCAAACTGA AGTCATGAAATGCATTCAAATTGGTCTATTATGTGCTCAACATAACCCTGATGCAAGACCTACAATGGTGGAAGTTGTTT CATATCTTGGCCGTTATTCAGCTAATATGCCAACTCCACAAGAACCTACAGTTTTCTTACGCACTAGGATGGAACCGACA GCATTTCCACAAAGACCAAGTTCTAAACAATCTGAGAGTGATTCCATCAATGAAATGTCTATAAGTAATTTTCTTCCCCG GTAG
Protein sequence (LotjaGi2g1v0163900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPKISDFGLARIVEINQDQENTNRIVGTYGYMSPEYAMLGEFSDKSDVFSFGIMILEIVTGKKKLSSYEPHHIANGLLS YVWREWKDQTPLSVLDQNIKENYSQTEVMKCIQIGLLCAQHNPDARPTMVEVVSYLGRYSANMPTPQEPTVFLRTRMEPT AFPQRPSSKQSESDSINEMSISNFLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 150 | 150 | 3.9E-37 | – | |
| PANTHER | 1 | 173 | 173 | 2.3E-47 | – | |
| PANTHER | 1 | 173 | 173 | 2.3E-47 | – | |
| ProSiteProfiles | 1 | 151 | 151 | 14.775 | ||
| SUPERFAMILY | 2 | 165 | 164 | 2.67E-30 | ||
| Pfam | 4 | 136 | 133 | 3.4E-16 | ||
| MobiDBLite | 161 | 187 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0163900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…