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LotjaGi2g1v0170900.2

Overview

Field Value
Gene ID LotjaGi2g1v0170900
Transcript ID LotjaGi2g1v0170900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Alcohol dehydrogenase family protein; TAIR: AT5G24760.1 GroES-like zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6; TrEMBL-Plants: tr|V7C2X6|V7C2X6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0170900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:58625421..58631093) extracted from Lotus japonicus Gifu genome v1.2.

TCATCATCAACATCAACCCCTCAAGTCATCACTTGCAAAGGTTGGTTTTGGTTTTGGTTTTTGTTTTTTTCCTTCCATTT TTGATATCACTACTCTATCTATTGTTAATGATTGATATGGAATGATGGGGCTTTTTAACTGTGTCTTGGATGTGGAACAG CTGCAGTAGCATGGGGAGCTGGAGAGCCATTGGTGATAGAGGAAGTGCAAGTGAGTCCTCCACAACCAATGGAGATCAGG GTCAAGGTTGTCTGCACCTCTCTCTGTCGCAGCGACATTTCCGCTTGGGAATCTCATGTAAGTGTTTCATCAAACTTTTG GAAAAGTGGAAAATTAAGGGGATAATATGCTGAAACTTTTGGGTAACATGTTCCTGGAAACCACAACACCTATAAGCAAA ACTAATTGAAGACTTCAATTTTAATAAGGGCTTAGTTTTCTTTTTTTTTTTAATTACTATTTTAATGTGTCCTGAATTTC CAATTGGTTGTACTTGTGCCTATAAGCTCAGTCCTCATGGTTGAATTGGCCCTTTGAGAGATACAACTGAACAGCATCAT GATTTTTTTTTACTGTTGCCAACCTATTCAGAGGCCATCAACGGATTAGGATTCTCTCGTGTGAAAATTTTCTCATGTCG AAGTTTTTATGCCTATCTATCTCATCATATACATTTACATGGTCCTACCTATTTAGCACCTATTTAATACCTATGAAGAG AGAGATAGTGCTGCAAACTCAAGAACCAGGCCCAGGTTTGGCAATGTCTACAAGAGGAGGCCTAAGCTGATGCAAGCTGG ACCACCTAATGATCACTCTTCTAGAATGTAGTATTCCTAAATAACCACCTGGTGAGGTCGCACCAATCAAGTGGGAAGGG GGGGGGGGGCATTGCTACCAGCTGAGAGAATATAAGTTTGTTAGGGAGAGAGTATTGTTTAGGCTGGAATTGGCTAGGAC CAGGAGAGAAGGAGCACTCTCGAAATTGCTCATTCCTATCTTTCATTTTCTTTCTGTTATTTGTAATTCCCTAAACACAC TGCTTCTGGAAATTCTCCAGAGGATTCAGTGCCATCTATTACAGTTGCATTCTCAGATATAGTGCTATTTTCTGGTACCT AACAGATAGACATAAAAACTTCAACATGAAAAACATGAGATCATTTCATGCCTCCTTGAGTTCTTGTTATTCAAGGATGA TTAGTCTATTGATGAATGTTTCTTTTTTTCATAATTTATCAAATTTTTGTTATAAATTTACAATTACAATCACATGGGTT TAAACATCTAACACAAGGTGCTTTTGTGCAGCCCATATTTCCTCGCATATTTGGCCATGAAGCATCAGGGTAATCTACAC TTGATGTTCTGTTTTTGGATTAATGCAACAATGAATCAATAGTGATCCTTAGGTTGTTTTCTTTGGATAGCTTAAAAAGA TTTTTTGTTTTCTTAAGAGTTACCCAATTGACTAGTATGAGAATTAGGTCAAGTACTGAGATGAGAAGTTCAGTCAGTGA CATTGATTAAATATGAGGGTGAAAGCAGCACCAAGGAGAATATTCCTGATGCTAAAAAGTATTGAGCTATCCATGGGAAT GTGATACATTGTTTCATCATGAACATCACTTTAACTAAATCATTGCAAAAGGAGTAATTTCCACAATAAGCATTTGAACA TTTAGTAGTAACTTTGCAGGATTGTTGAGAGTGTGGGGCTAGGAGTGACTGAATTCAAAGAGGGAGACCATGTGCTGACA GTATTCATTGGAGAATGCATGGAGTGCAAGCCTTGCACATCAGGAAAAAGCAACGTTTGTCAAGTTTTGGGATTGGAAAG AAATGGTCTAATGCATAGTGATCAGAAGACACGCTTCTCAATAAAAGGGAAGCCTGTTTACCATTATTGTGGTGTTTCAA GTTTCAGCGAATACACAGTAGTTCATTCTGGGTGTGCAGTGAAAGTCAGCCCAAATGCACCTCTTGAAAAGATATGCCTT CTGAGCTGTGGGGTTGCTGCAGGTAACATTCTCAAGTGTTTATTATCAGTTCTAATCAATGGAAATGATAGGGTCAAGCG AACTCTAGTAATCAACATTAAAAACTTAATAACCATGTCACTTAAATTAACAAACTGAGTTAAAACTTCAAAGTATTAGG CTGCCTCATTTTTTTCTTGATATTCCCTGTGGACGGTTAGAGTATTCCTGGCTTCTTTTTGCATATGTGTGGGGAGAAGC TTGTATGTTAAGGGTTCAGTATGACCTCTGCAAATAAACAAAAACAGTGTACTTTCAGTGACAACAATGTGAAATGAATT AACTGTAAAATCTTCTCAAGTTATCCTCTGAAGTGAAGTTTTCCAAGTGAATTAGTCCAGTTTTGTCTTAAATTAGTTAA AAAAGACAATGATTTCCTTTTACTTTGTTTTGCTTTTTGAAAATTCCTGTTTCTTATCTGACATGGATTGTTAGAAGTTT ATAGTTTAATTGAGTTTAGGGCATATGAGTGTTCCATCACCTGGCTCAGAGCTGCTTGCTAGGTGTACTCTGCAACGTTG TTTTCTTTAATAATTAAGATGTATTTATTATTAATGAATGACTTTGACCCCAATAGTTCATTGAAAACTTGATTTTTATT CAGTTAGGGGATATCAGGTATAGAAATGTTACCAGATCATTTGTTACTGGCTCCAAACTTCCAGAAAAACTCAACTAATT TTGATTGTAACTCAAAATGATGTTCATTATAGTCATTGTATAATGGTCCAAAACTCAATACAGGAATTGTGGATTATTAA CCAAAGAACATAAGGGATTAAGTGAATAGTGAGCAGTGTAAATGTTTCTCTTAGTTCTCGTAACCCGAATTTTAATATGG TATCAGAGTCTATCATAGATCCGTTTATTGGAGACCCACCCATATACGGGTCACCTGCAGATATTCATTCCTGCAAGTTC CACGCTCCAGATGTCCTGCCTTGGCCGTGAGGCGGTGTGTTGAATAGTCTCACATTGACTAAAGATATAGCTAAAATCAT TTTTATAAAGGGTAGAGAAATTCTCACTCCTAAGCTAGCTTTTTGGGGTAGAGTTAAGCCTAACCCAAATTCTAAGAGTT TCAAATCAGGTTTGATGAAAGTTGGATGCTTCCACAGTTGAGCCATTGAAACTGGTATGTGTGAAGAATATATGCCATTG AAGTAATTGTTGGTTATAAGTGGCACTGAATGATTAGTAGGTCATAAATCAAACATGGGCTTATTTTTTCTTCTCATTCT TATACCTCTATAATCTACTATAGATTTCTGGTACTAGACGCTGTCAAGGCCAAAGTTTTGTTTCTCAATGGACAGCATTA TATTTCTTATTGCCACTAAGTTCTTTGTTGGTTGTTGATAATGTGACTCATTACACTATAACATTAGGTCTGGGCGCAGC ATGGAATGTTGCTGATGTCTCAAAAGGATCAACAGTTGTGATATTTGGTCTTGGAACTGTTGGTCTTTCTGTAAGTACAA GGAATGGCGACTATATCTATCTTAGTTTCTCAACAGATGAGTGATAATCTTATCCAAATCATAATTATCATCAGGTTGCA CAAGGTGCCAAACTAAAGGGTGCCTCTCGAATAATTGGTGTCGACAACAATCCGCAGAAGTGTGAAAATGGTACCATAAT CAGTTCCCCAATTTTCTCAGAGCTTATATTTAAACCTCTCATAATCTTCTGATTTACTATTGTTGTCTTGTTGGTTGTTA CTACAGCTAAAGCTTTTGGGATTACAGAAGTTGTGGACCCGAATTCCTACGAAGAACCTATTGCACAAGTATGTTGTTAA AAGATGATACATAATTGTAATATATGACTGTCAAAAGTATGATGCCAGGTCAAGAATTACATGTGCATGATCCAAATAAT TTGTTTATTCTTAACCTTATTCTAGTTAAATAAGATTTTGTTTAGAACAGAAACTATGAACACATGCCCTAGGAGAAAAA GAGTAAGTTATAACAAATAACAATCATTTATATGTTGAAATTTTCAGGTTATTAATCGTATTACAGATGGAGGGGCAGAT TTCTCTTTTGAATGTGTAGGTGACACTGATATGATAACCACCGCGTTGCAATCTTGTTGTGATGTAATACTCCCGCTACC TATACCTAATATTTTGGTATTTAAAAGGTTTTATTCATTAGACTTTAATTTCATTCTGTCTTTCTTTGTTTCTCATAGGG ATGGGGATTGACGGTAACACTTGGTGTGCCGAAGGTGAAGCCTGTGATGTCAGCTCATTATGGACTACTCCTAATGGGAA GAACATTGAAAGGGTCTATGTTTGGAGGATGGAAACCTAAATCTGATCTACCTTCATTAGTTGACAAGTATGTGAACAAG GTAAGAGTAACACAACCATACTATTTTCTTTTATATGAGCAAGATTGCTTTGCATTTTTCTTACATTGAGATGAAACATG GCAATGCCTACTTCTTGACCAGAATACAATATACATACATGTGTAACGAATTCATGGTATGCTGGGTATTTTAGGCTCTT ACGTTTGGTTTAACTGATTCTCTCTCTACAACTATATTAGGGTGATATTTTTGTTGCAAAAATAATAATGATGATAGGCT AGGGATCTCTCTACAACTATATTAGGATGATATTTTTGTTGCAAAAATAATAATGATGATTGGCTAGTGATTACTGATTA GAATGACTCTGTACATAAATTAGATATTGAATAAAGTTACATTTCATGAACAAAACTAAAGGAGAGAAGACAGCAAATGT TTAGAGCCACTAGAATTCATGTAGACTTGTGTTGAAAATGTTTTGAACAGAACCACACAGATTCAAAGGTAACTAGTTGT ACAAAAATGAGTTTTTAGTTATGTAAACTATTATTTTAGCATTATCCATAGAAAATTCTCCCTCTCCCAGTATGTGATGT GCCTGAGTATTTGCATGTTAATTCAGCTAGCGTGTGCTTCTCTGCTCTCATATGCTTGACTTGTATTTTGCTTATTTACA ATGAAATGTAACACAAATCATGTCACCATTGTTACAACAAAAAATGTTACGTTATAAAGCTTAGCATAGGATGTTATTTC TCATGGTAAAGCAAGGGGAAATGACGAAAAATCCGTTCAAATAAAATAGGCATTATGTTGAAAAAATAACAAGAATGTGA TTTGAGTGGGAAAAATGTGTGTAAAGATCTGACACATGGGACAACTTAGTTGTATAATAGAAATGTGATTTTGACTGCGT TTGGGAGAGTTTATTAGATCGTATTTTATAGCATAAGTACGTATGTAATATCTGGATAGACTAATGACAATAACTTATGA CCAACCTACTTATTGTTTTTGTTAGTGGTAGAGGGGGAGAAATAATACTGCAACCCCAAATACTTGTCAAGAACTGATTC TATGTTTCATGTGCTTTTATTATTCATTTTATTACTTACAAGTTTAAGAGTGGAGAGGCATTCCTTCAAGAAATGTTACT AACAACAACAAAAATATGTTTATGTTTAATATGCAGGAAATCCAGATTGATGACTATATAACACACAATTTGCAATTTGA TGAAATTAACAAAGCTTTCACTCTCATGAGGGAAGGAAAGTGTCTGCGTTGTGTTATGCACATGCCAAGATAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0170900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGATCAGGGTCAAGGTTGTCTGCACCTCTCTCTGTCGCAGCGACATTTCCGCTTGGGAATCTCATCCCATATTTCC TCGCATATTTGGCCATGAAGCATCAGGGATTGTTGAGAGTGTGGGGCTAGGAGTGACTGAATTCAAAGAGGGAGACCATG TGCTGACAGTATTCATTGGAGAATGCATGGAGTGCAAGCCTTGCACATCAGGAAAAAGCAACGTTTGTCAAGTTTTGGGA TTGGAAAGAAATGGTCTAATGCATAGTGATCAGAAGACACGCTTCTCAATAAAAGGGAAGCCTGTTTACCATTATTGTGG TGTTTCAAGTTTCAGCGAATACACAGTAGTTCATTCTGGGTGTGCAGTGAAAGTCAGCCCAAATGCACCTCTTGAAAAGA TATGCCTTCTGAGCTGTGGGGTTGCTGCAGGTCTGGGCGCAGCATGGAATGTTGCTGATGTCTCAAAAGGATCAACAGTT GTGATATTTGGTCTTGGAACTGTTGGTCTTTCTGTTGCACAAGGTGCCAAACTAAAGGGTGCCTCTCGAATAATTGGTGT CGACAACAATCCGCAGAAGTGTGAAAATGCTAAAGCTTTTGGGATTACAGAAGTTGTGGACCCGAATTCCTACGAAGAAC CTATTGCACAAGTTATTAATCGTATTACAGATGGAGGGGCAGATTTCTCTTTTGAATGTGTAGGTGACACTGATATGATA ACCACCGCGTTGCAATCTTGTTGTGATGGATGGGGATTGACGGTAACACTTGGTGTGCCGAAGGTGAAGCCTGTGATGTC AGCTCATTATGGACTACTCCTAATGGGAAGAACATTGAAAGGGTCTATGTTTGGAGGATGGAAACCTAAATCTGATCTAC CTTCATTAGTTGACAAGTATGTGAACAAGGAAATCCAGATTGATGACTATATAACACACAATTTGCAATTTGATGAAATT AACAAAGCTTTCACTCTCATGAGGGAAGGAAAGTGTCTGCGTTGTGTTATGCACATGCCAAGATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0170900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEIRVKVVCTSLCRSDISAWESHPIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVFIGECMECKPCTSGKSNVCQVLG LERNGLMHSDQKTRFSIKGKPVYHYCGVSSFSEYTVVHSGCAVKVSPNAPLEKICLLSCGVAAGLGAAWNVADVSKGSTV VIFGLGTVGLSVAQGAKLKGASRIIGVDNNPQKCENAKAFGITEVVDPNSYEEPIAQVINRITDGGADFSFECVGDTDMI TTALQSCCDGWGLTVTLGVPKVKPVMSAHYGLLLMGRTLKGSMFGGWKPKSDLPSLVDKYVNKEIQIDDYITHNLQFDEI NKAFTLMREGKCLRCVMHMPR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43880
1 339 339 1.6E-210 –
PANTHER
PTHR43880:SF5
1 339 339 1.6E-210 –
Gene3D
G3DSA:3.90.180.10
2 334 333 5.0E-118 –
Pfam
PF08240
2 124 123 4.6E-21
IPR013154
SUPERFAMILY
SSF50129
2 149 148 2.74E-48
IPR011032
ProSitePatterns
PS00059
31 45 15 -
IPR002328
SUPERFAMILY
SSF51735
130 303 174 3.13E-42
IPR036291
Gene3D
G3DSA:3.40.50.720
144 282 139 5.0E-118 –
Pfam
PF00107
168 293 126 1.4E-21
IPR013149
SUPERFAMILY
SSF50129
290 338 49 2.68E-10
IPR011032

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0170900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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