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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0176600 |
| Transcript ID | LotjaGi2g1v0176600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kunitz trypsin inhibitor; TAIR: AT1G17860.1 Kunitz family trypsin and protease inhibitor protein; Swiss-Prot: sp|P13087|MIRA_SYNDU Miraculin; TrEMBL-Plants: tr|A0A0L9VIS0|A0A0L9VIS0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0176600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:59575107..59576012) extracted from Lotus japonicus Gifu genome v1.2.
GCGCGCACTTAATTGGTGACTAAACGACAAAACTTAAAGTCCATTCCACACATAGATTAATCCAGCCAATTATTTTTTAT AAAGCTCCCAGATCATATTAAGAAGTTTGACTGCGCGTCATGGCTAATTGTATGTGTTGAAATCCATGACCACCATGACT ATAGAACACTGCAAACAAGTCCATAGATTAACACCACCCTTGCCTATAAAACTTCATGCTCTTCTGCTATTCAATTCACA GAAACAAAAATTACTTATAATTCATCATACCAAAGCAATGAAGATCACATTTTTTGCATGTGTCCTTCTCTTTGCCTTGA TCTCACAACAACCGCTGCTTCAATCAGCTGAAGCTTTACCTGAACAAGTGGTTGACACATCCGGGAAGAAGCTTCGACCC GGCAGCAATTACTACATCATCCCGGCATCTTCTCGTATTGGAGGCCTTGGCCTTACTAGCACAAGCAAAGAATATTGCCC GCTCGATGTTGTGGCTGTGCGTGGTTTCCGAGGCCTACCTTTGGTGTTTAAACCTCTCGACACAAAGAAAGGTGTTGTTC GTGTCAATAGCGATCTCAATATCTATTTCGCTACAGAAACAAGTTGTCCACAATCCACAGTGTTGAGTGTGGACCACTAT GATCCTCCAAGTCAGCTGTGGTTTGTAACCACCGGTGGTGTTTTGGGGAATCCGAGCTCGGATACCCTGTCCTATTGGTT CAAGATTGAGAAGTATGAGGAAGCTTATAAACTTGTTTTCTGCCCAAGTGTGTGCCCCAACTGCAGTTATCAATGCAGGG ACATAGGGATACATGAGGATCAATATGGCAAGCGTCTTGCTCTCAATGATGTGCCGTACAAAATTCGTTTTGAGAAGGCT TGAAGCTCCAACTAATATAATGTCTA
CDS sequence (LotjaGi2g1v0176600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCACCATGACTATAGAACACTGCAAACAAGTCCATAGATTAACACCACCCTTGCCTATAAAACTTCATGCTCTTCT GCTATTCAATTCACAGAAACAAAAATTACTTATAATTCATCATACCAAAGCAATGAAGATCACATTTTTTGCATGTGTCC TTCTCTTTGCCTTGATCTCACAACAACCGCTGCTTCAATCAGCTGAAGCTTTACCTGAACAAGTGGTTGACACATCCGGG AAGAAGCTTCGACCCGGCAGCAATTACTACATCATCCCGGCATCTTCTCGTATTGGAGGCCTTGGCCTTACTAGCACAAG CAAAGAATATTGCCCGCTCGATGTTGTGGCTGTGCGTGGTTTCCGAGGCCTACCTTTGGTGTTTAAACCTCTCGACACAA AGAAAGGTGTTGTTCGTGTCAATAGCGATCTCAATATCTATTTCGCTACAGAAACAAGTTGTCCACAATCCACAGTGTTG AGTGTGGACCACTATGATCCTCCAAGTCAGCTGTGGTTTGTAACCACCGGTGGTGTTTTGGGGAATCCGAGCTCGGATAC CCTGTCCTATTGGTTCAAGATTGAGAAGTATGAGGAAGCTTATAAACTTGTTTTCTGCCCAAGTGTGTGCCCCAACTGCA GTTATCAATGCAGGGACATAGGGATACATGAGGATCAATATGGCAAGCGTCTTGCTCTCAATGATGTGCCGTACAAAATT CGTTTTGAGAAGGCTTGA
Protein sequence (LotjaGi2g1v0176600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTMTIEHCKQVHRLTPPLPIKLHALLLFNSQKQKLLIIHHTKAMKITFFACVLLFALISQQPLLQSAEALPEQVVDTSG KKLRPGSNYYIIPASSRIGGLGLTSTSKEYCPLDVVAVRGFRGLPLVFKPLDTKKGVVRVNSDLNIYFATETSCPQSTVL SVDHYDPPSQLWFVTTGGVLGNPSSDTLSYWFKIEKYEEAYKLVFCPSVCPNCSYQCRDIGIHEDQYGKRLALNDVPYKI RFEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 46 | 46 | - | – | |
| TMHMM | 37 | 59 | 23 | - | – | |
| PANTHER | 45 | 245 | 201 | 4.2E-76 | – | |
| PANTHER | 45 | 245 | 201 | 4.2E-76 | ||
| Phobius | 47 | 65 | 19 | - | – | |
| Phobius | 66 | 245 | 180 | - | – | |
| Gene3D | 71 | 245 | 175 | 8.8E-60 | – | |
| SUPERFAMILY | 73 | 245 | 173 | 3.36E-46 | ||
| PRINTS | 74 | 103 | 30 | 4.3E-7 | ||
| CDD | 74 | 244 | 171 | 1.33741E-54 | ||
| SMART | 74 | 245 | 172 | 4.7E-50 | ||
| Pfam | 75 | 244 | 170 | 5.6E-47 | ||
| PRINTS | 191 | 210 | 20 | 4.3E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Endopeptidase inhibitor activity | Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides. |
Expression pattern of LotjaGi2g1v0176600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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