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LotjaGi2g1v0190300.1

Overview

Field Value
Gene ID LotjaGi2g1v0190300
Transcript ID LotjaGi2g1v0190300.1
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT4G13820.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A0B2R2E6|A0A0B2R2E6_GLYSO Receptor-like protein 12; Found in the gene: LotjaGi2g1v0190300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:62060382..62066033) extracted from Lotus japonicus Gifu genome v1.2.

TTCAATTATGAAAGTCACCATTGACTTACGTATCCCCGCTATAAGAAGTTTCTTCATTATTATTTCTCTTTACACACAAT CTTAATTAATCTCTACTTTGCAAACCATCAATCATCTATGATGAAAATCAAGCCAGTCCGATCAGTTTTGGGGATCATGC CATTACTATACTTAAACTGGCTTTGCCTTTGTAATCATGTATTTGTGGTTTCTGGCCTTTCTCTTGATGATCAGAAATCT TTGCTAATCCAACTTAAAAACAACCTCTCATTCCTGCCAGAAGATAGCACCAAGCTGAAGTCATGGGATCCAAGTGATGA TTGTTGTGCATGGATGGGGGTAACATGTGACAAGGAGGGACATGTTACTGGTCTTGATCTCAGTGGAGAATCATTCTCTG GTGGATTTAACCATTCAAGCAGTCTTTTCAATCCCAACACCTCATGAATCTGAATTTGGCTGATAATGCTTTTGACATCC TTCCATCCGGATTCAACAAGTTAAAGAATTTAGCTTACCTGAATTTGTCACATGCTGGCTTTAGGGGGCAGATTCCATCA GTCATTATTCTAGATGGCAACGGTTTTTCAACCCCGGTGCCAGAGACATTTTCCAATTTAAAAAATCTGACTACCCTCAA TCTTGGAGATTGCAACTTGACTGGAAGATTTCCATCGAAGATCTTCCGGATTGAAACATTGTCATTTATCAACATATCAT TCAATGACAATCTTCATGGTTTCTTTCCAGACTTCCTCTTGGGTGGATCTCTCAAGACCATAAAAGTCAGTGGAACAAAC TTCTCTGGAACACTACCACACTATTGGTAACCTGAGGTACTTATCTGAATTGGATCTTACTGATTGTCGATTTAATGAAA CACTTCCCAATTCACTGTCAAACCTCACTGAACTCACTCTCCTGGATTTGTCAAATAACAGCTTCACAGGTCCATTGCCA TCATTTGGAATGACCGAAAAACTAACCCACCTCGACCTTTCTCATAATAGCTTAAGCGGTGCAATTCCTTCATCTCTTTT TAGGCTTCCATTACTACAGATTATTCTTCTTTCAGACAACCAGTTTAGTCAGCTTGATGAATTCCTAAATGTGTCTTCCT CTGTATTGGACTTCCTCGATTTAAGTAACAACAATATACCAGGACCTTTTCCTGAATCTATCTTCCAGCTCACTGCACTA TCAGTCCTTCGGGTTTCATCTAACAAGTTCCATGGACCATTGCAGCTAAATAAGCTTTTACTGCTCAGATTATTATTTGA ACTGGACATTTCATACAACAACTGGTCAATCAATGCGTATGTGGCCTCTCCTTTTCCCCTCCTTGGCAGTCTATTTATGG CATCCTGCAACTTGAAAACTTTCCCTAATTTCTTGAGATATCAATCCACATTACTCGGTTTAGACCTTTCAAGGAACCAT ATTCAAGGAATAGTGCCCAACTGGCTTTGGAAGTTAAAAGATTTTGCAATACTTAATATTTCGAGCAATTTGTTGACTGA TTTGGAAGAACCTATGCAAAACAATATTTCTTCCTTGGAAAAGCTTGACCTTCATAACAACCAACTACAGGGGTCAATAC TTAATTTTCCTGTAAATGCTTACTACTTGGATTATTCGAGGAATAGATTTAGCTCTGTTATCCCACAAGATATCGTTAAT TACTTGTCCACAAGATATTATATCTCTCTTTCAGACAACGAATTCTATGGCAACATCCCGGATTCCCTCTGCAATGCTAC ACATCTTGAAGTGCTGGATCTTTCAATTAACAACTTTTCTGGAACAATTCCATCTTGTTTAATGACAAAGACCGGGACAC ATAGGGCATTAAGTTTGAAGGACAACAACCTCAAAGGCACTATCCCAGATATGTTTCCAGCTTCTTGTGCTCTAAGCACG CTGAATCTCCATGGAAATAACTTGCATGGGCCAATTCCAAAATCCCTTGCCCACTGTTCCAAATAAGAGGTACTGGACCT TGGAAAAAATCATATAACTGGTGGCTTCCCATGCTTTTTCCAAAACATATCCACAATCCGTGCACTGGTTTTGCGAAATA ACAAATTTCAAGGTTCCCTAGGATGTGGACAAGCCAATAATAAGCCTTGGAAAATGCTTCAAATTGTCGACATCGCTTTT AACAACTTTAGTGGCAAACTAAAGGGACAATATTTTGCAAACTGGGAAACAATGATGCATGATGAAGATCAACCAGGATT AGAGTTTATCCATGAGGGAACTATAGGATATATATATTATCAGGATAGTGTGACAATAATCAACAAAGGTCAACAGATGG AGTTGGTTAAGATTCTAAGAGTCTTTACATCCATTGATTTCTCATCTAACAAGTTTGAAGGACCAATACCAGAGGAGCTT ATGCATTTCATAGCACTCCATGTTCTCAACCTTTCAAACAATGCTCTCTCTGGTGAGATCCCATCCTCCATAGGGAACCT GAAACAGCTGGAGTCATTGGACCTCTCACAGAACTCTCTGCACGGAGAAATTCCGGTGCAGCTTGCAAGTTTGACATTCC TTTCTTATCTGAACCTCTCCTTCAATCATTTGAAGGGGAATATCCCAACAAGTACCAACTTCAGTCATTTCAAGCTTCTT CTTTTGAAGGCAACGATGGACTACATGGTCCTCCGTTGGATGTAAAACCAGATGATAAAAAGCAAGAGTTGCTGACACAA CCAGCATGTAAAAGGCTAGCTTGTACAGTTGATTGGAACTTTTTAAGTGCAGAGCTGGGATTTGCCTTTGGCCTTGGAAT TGTCATTGGTCCCCTCTTGTTTTGGAAGCAATGGGCGATATGGTATTGGAAACTTGTGGACCAAATTCTTTGCTTGATCT TCCCTCAGCTATATCTTGATTATGTAACCCAGGGAGGACAGAGGTACACTGTTCTAAGGTGGTGGCGTTAATGATCAGTA AGTGTGCTAATAAGTTGTGATCTTATCTGATATCATTTCCTCTTAATTTCCTATTTATGTTGTTGTTTGGGTTTACTTGT GGTGATATGATATGTACTAGAACTTTGAAGAGACATTTTTCTTGGTTTAAAGAAAATAATGTCATAGGGAGTGGTGGTGT TCAGTGTCATAGGGAGTGTTAGTGTACAATGTTTCAGTGTTTCATGCAGCCATATCCATTTAGTTGAATGACACCCTTGA CACATTGCTATAAAAAACATGTCTTATTGTTGTATATTTTTCTGTTCTGTTTTTTTACACAAACTAGCATCTATATCCTA GAGGAACTTCCAAAAAGGCATCAAATATGCTTTATAATAGAACACAAAATGAAAGAAACATATTTAGAGAGAACCACATA AACCCAGTGTACATGATGTTTCCTAAAAAAAAAAGACAAGTATCATACCACAATATTTATTTTCTTTGTCTCAGCAAGTT GACCAGCAGACTTAATAGATAATACATCAAATTCTTTTACCTGTTATTTAAAAGAAGAAACTTTTCAGGGACTGTGACTT TATGCTAAGTTGATGAAATTATAAACTGCACCTTCAATCATTAAGCATCGAAACAGAGAACATTGAAGTCACAGACTCAC AGTTTCTGCACCATAAAGAAAAGTGAAGTATTGTGACACACGAAATATATAATAAAATTGTGTATTAAAGAAACTTAGTA TGATTTCATATCTTAAATACATTATTATATACTAAGCAACAGTAGATTAAATGATGGCAAAGGCTCTAAGTTGATTTGTG ATGTGCCATGTTGTCTGTTTTGAAAATGCCAAGTTAAAAGGCACAATATCTATTCTATTGTGAACAAAACTTAAATGATC CTAAAATTCAAGACTCATTAAATTGATGGAGAGGTTTCTCCTCAGTACCAATGCTTTTTGATCTTTCTGCAAACAATTCA CTCTTGTACGTGTCAACCATTAGATCCTTGACCATTTCCCATGATGTTTTTGAACTAGTTGTAGCACTGACATTGGAAGG CTTTGAATTGGTTTTCTTACAGCAAATATACATGGAAGCCTCAGCTCAGTTAGCATTTTCTTTCTTGATGTTCAGAAGAT AAATCAAGGCAAGCTAGCACATACTCAGGATAAGCTTTAAGCTTATGGGAGTTTCTATACTAAGATCACTATTTGAACTC TAATTTTCCAAAAGAAACGTACGTCCTTATAAATTTACAAGTGTTCATTTAGAAGCAAGACAAGAGAGCTTCTAGAAGCT AACTATGTTTATTTGAGGCATATAAGCTAATTTCAGCTTCTAAAATCATTTAAATTATGTGAAGCAAAAACCAGAAGCAA TTATGTGGCAATTATGTTCAAAATCTTTATGTAGCTCATGGGGATGTAGATGAGAAAGGTTTAACCAGATAAGATATCAG CATTGTATCAGGAACGAAATCAAGTTTCATAAGTTTGGTCGGAAAAAAATGCATGTGGATAGATGCATATGGATACAAAA CTAAGAAATGCAGATAATAACTCAATGAACATGCAATTTCAAACCCCCAATCCAGCTAGATGGAAGCAATAAGGGTAAGA GCAGAAACAACTTACACATTCTGAAATCCGAATAGATTGGATGAAGGTCTGGCTAAGATTTGATTTGAGGCTTCTTTGCC CTTTTCTGCCAATGCTGAATCACTCAAGCTTGTGAGAGAAGTGCAAATGGAGCAATCAAGAGATGAAATCACCTATGTGT GTTTGATTCACTTGATAATAATATGCAATTTGTTGTTTGATTCACATGATAATAATAAAAAAAATAAGATAAAAGATAGA CCATCTGTGTGTTTGTTCCATAGTTATCGATCGCGCGGAATAGCGGCGCTATCGCGCCGTCGCGTCGCGGCGGTTCCCCG CGATTCAGATCTGATCGCGTCGCGGAACGGAGTCGCGGCCGTCGCGGCGCTATTTGCGGCCGTCGCGGGTCAAATCGCGT TCAATTGCAGTGCTCCAGGTTAAGATGGGTCGGATCCAAGGAAAATCCCCAAATTGCCCTTAAAATTATAAAATTAGGTT AAAATTTGAGGGTACTTTTGGGATTTCTCTTTTCATAAGTGAAACGTGCGTTTCACTCTTCTTCTTCTGCGATCTCCATT GCGATTTCCTTCACCTCAGGCTGCTCAGCCACCTTCGACCAGAACCAGAACCCGAACCCGAACCCGAACCCATGGCTAAA GCGCAATTTGACAAGCACCGTCCAAGCTCCGGCGATCACCACCCCTGTTTCCCTTGGGCCTCTGTTCTGTTCTGAGTTGC TCTGTTTTTTATCTTCTATTCCTCTATTTTTCTTCTTATTTATTATTCTGTTCTCAAACATACTTCTTCGGTTCTCCTCC TCTAGTAGTCCTCTCTTCTCTATCATTTCATCATGTTATGAATTTGAAGTTATATTTATCACTTTTTAGTAATTATATGT ATATATTAATATTAATTATATAATATATGTGATTGTGAAAAAATCAAAATAGCGGTCATCCCGCTATCCGCTATCCCACT TTTGGGGTCGGCCGCTACGCGCCGCGATCCGGGATTGACTACTATGGTTTGTTCACATTATAATAATATGCAATTCTGAA ACCTAAGTTAACATTAAAGAAAAAAAATCAGTTTGAATCAGAAAATTAGAAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0190300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACCGAAAAACTAACCCACCTCGACCTTTCTCATAATAGCTTAAGCGGTGCAATTCCTTCATCTCTTTTTAGGCTTCC ATTACTACAGATTATTCTTCTTTCAGACAACCAGTTTAGTCAGCTTGATGAATTCCTAAATGTGTCTTCCTCTGTATTGG ACTTCCTCGATTTAAGTAACAACAATATACCAGGACCTTTTCCTGAATCTATCTTCCAGCTCACTGCACTATCAGTCCTT CGGGTTTCATCTAACAAGTTCCATGGACCATTGCAGCTAAATAAGCTTTTACTGCTCAGATTATTATTTGAACTGGACAT TTCATACAACAACTGGTCAATCAATGCGTATGTGGCCTCTCCTTTTCCCCTCCTTGGCAGTCTATTTATGGCATCCTGCA ACTTGAAAACTTTCCCTAATTTCTTGAGATATCAATCCACATTACTCGGTTTAGACCTTTCAAGGAACCATATTCAAGGA ATAGTGCCCAACTGGCTTTGGAAGTTAAAAGATTTTGCAATACTTAATATTTCGAGCAATTTGTTGACTGATTTGGAAGA ACCTATGCAAAACAATATTTCTTCCTTGGAAAAGCTTGACCTTCATAACAACCAACTACAGGGGTCAATACTTAATTTTC CTGTAAATGCTTACTACTTGGATTATTCGAGGAATAGATTTAGCTCTGTTATCCCACAAGATATCGTTAATTACTTGTCC ACAAGATATTATATCTCTCTTTCAGACAACGAATTCTATGGCAACATCCCGGATTCCCTCTGCAATGCTACACATCTTGA AGTGCTGGATCTTTCAATTAACAACTTTTCTGGAACAATTCCATCTTGTTTAATGACAAAGACCGGGACACATAGGGCAT TAAGTTTGAAGGACAACAACCTCAAAGGCACTATCCCAGATATGTTTCCAGCTTCTTGTGCTCTAAGCACGCTGAATCTC CATGGAAATAACTTGCATGGGCCAATTCCAAAATCCCTTGCCCACTGTTCCAAATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0190300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTEKLTHLDLSHNSLSGAIPSSLFRLPLLQIILLSDNQFSQLDEFLNVSSSVLDFLDLSNNNIPGPFPESIFQLTALSVL RVSSNKFHGPLQLNKLLLLRLLFELDISYNNWSINAYVASPFPLLGSLFMASCNLKTFPNFLRYQSTLLGLDLSRNHIQG IVPNWLWKLKDFAILNISSNLLTDLEEPMQNNISSLEKLDLHNNQLQGSILNFPVNAYYLDYSRNRFSSVIPQDIVNYLS TRYYISLSDNEFYGNIPDSLCNATHLEVLDLSINNFSGTIPSCLMTKTGTHRALSLKDNNLKGTIPDMFPASCALSTLNL HGNNLHGPIPKSLAHCSK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.80.10.10
1 88 88 1.7E-17
IPR032675
SUPERFAMILY
SSF52058
4 331 328 8.84E-39 –
Pfam
PF00560
4 23 20 0.027
IPR001611
PRINTS
PR00019
5 18 14 3.4E-6 –
PANTHER
PTHR27004
24 338 315 1.1E-74 –
PANTHER
PTHR27004:SF243
24 338 315 1.1E-74 –
Gene3D
G3DSA:3.80.10.10
102 338 237 1.0E-49
IPR032675
PRINTS
PR00019
193 206 14 3.4E-6 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0190300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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