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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF00560
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 271 results. Now displaying 1 of 6 with 50 rows per page. This search has taken 0.105s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
1 GO term
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
1 GO term
Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
1 GO term
Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
2 domain predictions
1 GO term
Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
2 domain predictions
1 GO term
Lj0g3v0013569.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 5132444 5135578 -
2 domain predictions
1 GO term
Lj0g3v0022029.1
n.a. Kinase-like protein [Medicago truncatula] gi|357491853|ref|XP_003616214.1| chr0 8901816 8902952 +
2 domain predictions
1 GO term
Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
1 GO term
Lj0g3v0077519.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561444|ref|XP_003548991.1| chr0 29748725 29749878 +
2 domain predictions
1 GO term
Lj0g3v0090439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 37254703 37257214 -
2 domain predictions
1 GO term
Lj0g3v0094389.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39688550 39691233 +
2 domain predictions
1 GO term
Lj0g3v0095839.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 40362218 40363688 -
2 domain predictions
1 GO term
Lj0g3v0100639.1
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
1 GO term
Lj0g3v0100639.2
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
1 GO term
Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
2 domain predictions
1 GO term
Lj0g3v0134889.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357493297|ref|XP_003616937.1| chr0 61907973 61912446 +
2 domain predictions
1 GO term
Lj0g3v0167089.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 79429669 79434308 +
2 domain predictions
1 GO term
Lj0g3v0173409.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| chr0 83385336 83391158 -
2 domain predictions
1 GO term
Lj0g3v0196459.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357501759|ref|XP_003621168.1| chr0 95786710 95787511 -
2 domain predictions
1 GO term
Lj0g3v0199339.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356561470|ref|XP_003549004.1| chr0 97688869 97692688 -
2 domain predictions
1 GO term
Lj0g3v0203199.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr0 100705047 100707368 +
2 domain predictions
1 GO term
Lj0g3v0210819.2
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357488299|ref|XP_003614437.1| chr0 106051733 106061397 -
2 domain predictions
1 GO term
Lj0g3v0220159.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635233 112639990 -
2 domain predictions
1 GO term
Lj0g3v0220169.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635481 112639990 -
2 domain predictions
1 GO term
Lj0g3v0235609.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356561480|ref|XP_003549009.1| chr0 122105042 122106846 -
2 domain predictions
1 GO term
Lj0g3v0247179.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128097658 128101088 -
2 domain predictions
1 GO term
Lj0g3v0247199.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128104974 128106812 -
2 domain predictions
1 GO term
Lj0g3v0252649.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356545122|ref|XP_003540994.1| chr0 131052396 131060830 +
2 domain predictions
1 GO term
Lj0g3v0268889.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250-like [Cicer arietinum] gi|502152807|ref|XP_004509103.1| chr0 139301442 139305142 -
2 domain predictions
1 GO term
Lj0g3v0268899.1
n.a. n.a. chr0 139303435 139305142 +
2 domain predictions
1 GO term
Lj0g3v0270309.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357515415|ref|XP_003627996.1| chr0 140061819 140065622 -
2 domain predictions
1 GO term
Lj0g3v0278349.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr0 144542642 144544812 -
2 domain predictions
1 GO term
Lj0g3v0282649.1
n.a. n.a. chr0 146542871 146545973 -
2 domain predictions
1 GO term
Lj0g3v0291029.3
n.a. Receptor like protein 33 [Theobroma cacao] gi|508725116|gb|EOY17013.1| chr0 151083660 151090180 +
2 domain predictions
1 GO term
Lj0g3v0296659.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 154114009 154118296 -
2 domain predictions
1 GO term
Lj0g3v0304789.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 158780159 158781199 +
2 domain predictions
1 GO term
Lj0g3v0304799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Glycine max] gi|356561584|ref|XP_003549061.1| chr0 158781480 158783322 +
2 domain predictions
1 GO term
Lj0g3v0306109.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357439017|ref|XP_003589785.1| chr0 159627112 159629719 -
2 domain predictions
1 GO term
Lj0g3v0327439.1
n.a. disease resistance protein/LRR protein-related protein precursor [Glycine max] gi|351724553|ref|NP_001235526.1| chr0 171171664 171174112 -
2 domain predictions
1 GO term
Lj0g3v0329609.1
n.a. disease resistance protein [Glycine max] gi|351734460|ref|NP_001235512.1| chr0 172319366 172321769 +
2 domain predictions
1 GO term
Lj0g3v0331049.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 173005144 173009117 -
2 domain predictions
1 GO term
Lj0g3v0336229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 176102747 176107250 -
2 domain predictions
1 GO term
Lj0g3v0339459.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| chr0 177867141 177868508 +
2 domain predictions
1 GO term
Lj0g3v0359679.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 1-like [Cicer arietinum] gi|502127369|ref|XP_004499678.1| chr0 189379633 189384247 +
2 domain predictions
1 GO term
Lj1g3v0050980.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 2-like [Cicer arietinum] gi|502158862|ref|XP_004511305.1| chr1 290354 292244 +
2 domain predictions
1 GO term
Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
2 domain predictions
1 GO term
Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
2 domain predictions
1 GO term
Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
2 domain predictions
1 GO term
Lj1g3v1147550.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220810 +
2 domain predictions
1 GO term
Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
2 domain predictions
1 GO term