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LotjaGi2g1v0190600.1

Overview

Field Value
Gene ID LotjaGi2g1v0190600
Transcript ID LotjaGi2g1v0190600.1
Lotus japonicus genome version Gifu v1.2
Description Myb family transcription factor-like protein; TAIR: AT5G16560.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1; TrEMBL-Plants: tr|A0A151RF88|A0A151RF88_CAJCA Putative Myb family transcription factor family; Found in the gene: LotjaGi2g1v0190600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:62141790..62150834) extracted from Lotus japonicus Gifu genome v1.2.

GGCCAAGAGAGTTAGAGGGATGACGAGATGTACAAGGAGAAGTAGCAGAAGGAACAGTGTTTTCCTTTCCCTTGTACATG TAAGTATGTAACTAACATGAACAGTACAATCCCTCTTTGATTTACTCTCGTCGTCTTCGAAGAAAGAAAGCAAAAATGAA ACACAGAATAAAAAAAGAAAACTTTGCAGTTTGCAGTGTTTGCGTGTATTGACTATGCTAGAAGAAAAAGGAGTGTTAAT ATAGAAACGGAAAGAAAGGAATTGTTGGAGTGTCACTTTCCTATATATACTCTCAACTCAAGTTAGCCAGAAATCTCATC TCTCTCTCTCCCTCTCCCTCTCTCTCTCTCTTCCATTCCAATATTCCTTTATATATTTTTTTGTTTATATTACTATTATG CACAACCACACATCTCTCTCTCTCTCTATACATAGTCCTTGAAGGATGTCTGTTCTTGTGAAGCTATCTGAGTAAAGGTC TAATTGTTATTCAATCTAGCCATCTTTCAAAGAAGACATATATTCATGCCCATTTTTGCACCCCAACAATTAAATTAAAT CACCCTTAATTAATATTCTAGCTATCTTGTTCTTGTTTGTTTATTATTGCTTGAGGGGTTCTTTTCTTTCCCTTACCATA CATCAATCTAGAGTACTATAGAGGGAATAAACAAACACCTTCCCCCACTTTAGTCCTTTCTCTGAATTCTCTTCTTGCTG GTTTCAGTGTTTGATGAGTTGAGTGGGTATTTCTTTTTCCTTTCCTTTCACTACTAGTGTACTAGCTACCACTGCTAGAA ATCATTTGTGGGAATATAAGCTGAAAATGCCTCAGAATCTAATTCCTGATCTTTCACTGCACATTAGCCTCCCAAACAGT GCTCCATCTTCAATTTGCACAAATGAAAGGGATGATGATTCAGCCTTTGATATATGGAGATCTTCAGCTGAAGAAGAAGG TGAATATGGCTTCAAATCTCACAGTGATGGTTCAATCAAAGGTAGCAGTAACATAGAGCTGAGTCTAGGGAACCCCACAA GTACTACTCCCTCTGAAGCTGAGAGCCCCTGGAGGAGAAGTAGAAACTTTGTTAGAGCAACACAAGAGAGGCAAACAACA ACAAATCATGGTGAGGTTTCAGAGGGTGTAAGAAGAGTTATAACAACACCCTTCAATGGAATCCCTTTTTATAATAGTAA CAATTCCTCAACAGAGAGGGTTTCTTCTCTCTATGCACCACTTCCATTACCATACCCTTCTTGTTCCCCCAATAATGATG CTACTGTTGGGGGTGTAAGTGTAACTCCAATCTCAAGGTTTAATGGGATAACCATGGAGAATCTAAGACCTAATCAGCAA TTTCAGTACTTGAACCATCATCATCATCATCAACAACAACTTCTTCATAATCATCATCAGAATCAGCAGCAGTTTGGGAC TAATGGAGTGTCTGATTTTGCAAATGGATTTATGAGGTCAAGAATGTTCAATACTCCAAAGCTGCAAAGTAAGAGGAACA TGAGGGCTCCAAGAATGCGTTGGACTAGCTCTCTTCACAATCGCTTTGTTCATGCTGTTGAGCTTCTTGGGGGCCATGAA AGTGAATCCCTAATTCTCTGATCCCTTTTCTCATTGTGTGTAGTTTTTAGTACTTGATGTTGAACTTTTCTTGTGTTTTT GGATGGTAGGGGCTACTCCAAAGTCAGTTCTGGAGTTGATGGATGTTAAAGATCTAACACTTGCTCATGTCAAGAGCCAC TTGCAGGTACTACATCGCTCATGTTTGGATCAACTTCTATTTTATTAAAATCGATTCTAAAGTCTAAAAGCTGTCTGACC AAATGTTTGAATTAGCTTTTTATCTCATTACCAACTCTAAAATCCCAAAACAACTTTGTATGCTTATTACTAGAATTGAC GGTGACTTCAGAACCAAATTATTTCCTCAGAATCAATCGTGAAGCCCAGAAGCTGCTTAATTAAATGTTTGAATTAACTT TTATTTTTTCATAATCAATTCTGAAATCTAAAAATTACTCTCATAAACTTATTACTAAATTGATTTTTTTGATAAATTAC TAAAATGATTCTTACAAGGTAGAAAAATTTCCAAATATCAAGACCTTCCTTGGTTTCCATGTTGAAACAAAATTACAAAA ACACAATCTCTTTCTTGGTGAAGTGTGTGAACTGGAGTGAGTAGACTTTGTCCAAGGTCTATCTAAGGGGCACAGTAGCC AAGGCATGCAGTGCTGAATGAATGGATGAACAGTAGAAGCTGTTGTTTGATACAGAGAACCGGACAAGTTCTACTTTTCA TGAGAGAGAGAGAGAGAGATAAAGGAGATGGAAAGTGAAAGTAGGAAAAGTAGCCATCATTTCTCAATAATAGAAGCAAT TACTTACCTTACCAAACATCAACCTCGTGGTTATTAAACAACCCCAGAAAACAAAGAAAAAGAAGCATCTATGATGATTT GATTATTTTTTCCCTTCAAAATCTTCTTCTCCATTCAGATTTCACATCTATTCTTACTGTTTATTTATTTTATTCATGAT TCATTTCCCTTTATATAGTATTATATTCATCTTATTTGTCTTTTTTTGGGTTCTGCAGATGTATAGGACTGTTAAAAACA CTGACAAGCCAGCAGCTTCCTCAGGTAATTCATGTTGAAATCACCTAATGCAATTCATTTATTTATACTAATTTTATTTC CTTGATCTTCGCTCCAAATTTGAGTGCACTTTATTCAATTCCTCTGAAGATTCCCTCACAACAACTCTTTATGACTCAGA CCCTAGTAATCTCTACATTAAATAATCTTCTCTTTACATAAAGCTTAAAAACTCAAGATTCATTTCAATTTTCTCTCTAA ATACTATGATATCATGAGTTGTTAATGCTTATACAATGCAATATATAACAGATGGAGATGAGGATTTCATATCCCTAACA CCACCACCCATTAATCAAAGCAAGAACAATTATTTACCAAATCAAAGGGGTCCTCTAAATGCACCTCAAAGTCATGATGA TATGGCCCACACTTCAAGTAATCTATGGGCTAATTCTTCTTCTTCCAGGTAATTTCTATATCTTAATGAATATATCTGCA TGGGTGCATTGTTTGGATCTATTGCTATCTATATTCTATATATGCATGGCATGGTTGAGTTTAATAAATTATCAAGTTAG GGAAATCATAAACTCAAGTCCACCCTTTTTGTGAAACACATAAAAAGTGCTTTTTTCCCTACATTAACTTCTGCTTTTCC ATTTATTTTCCTCACTCCACTCTTGCTTTTCTTTCTTATGATCAAAAGTAGCCATGCCTCTTTTGGCTGATACCTCTTTA TGGTACAATCTCTTTCACCTTCTTTAAATGTACAGAAAGAAAGGTGGTTTTTCTGAAACAAGATCATGAAATTTTCAGCT AGCTCTCACTGCCCAATATTTTCTGCGGATCAACATTCATTTTTTAGAACAAACATATTTCAACTCTATGTTCACTTTTT TGTTTTTCTTACCTTAATTGGGTATCTATAATTGCACACCTTTAATGGTCTTGTTTGAATCCGTTCAATAACTAACATTG TTACACAATACAACCGTTACAATGTGTCCAATTTTATGGGTTTTCATTTCCAATTTTTTCTGTAAAGTCGTACCTTTTGT ATTCTAGCTTTATCATAGGTTAATGCTTTGGTACTGGATCCTAATTCAAATTTTGAGTCAACTAGTAAGACAAAAGATGG TAGGATCTTAGGTAGCAAACTCCTACAATGACTATAGTGACCTCTCAAAAGAACATTTCTAAACTAAATTGGAATTGGTC GGAAAGAATTAAGTTCATGGTGTACAAAATTTGAGTTTGAGTTCAAAAGGATATTAGGTAACTAGTAAATTATTAGGTTC AATTTTGAATGCGCATTTATTCAATAGAATGCACTTGTTAAATTCACTCACAAAAGAAAACCAAACAAATCCTAACATGC TTGACGAAAGAGCATAATCCTTCTTATCCAAGCCGACTCAATGACCATAACCATGCTTATTGGACAAGTTAGTTTTATTT AAAGTTAACTTTGACACTCAAGCTACTCATAGAAGTCTTTTCACATTATTGATTTTGCCTTTAAAATCAATTTTAGAGGA ATTTTCAACATGGTTATCTCTTTCTAATCACTGTGAGCCTGTTTGTTTGAAGTCAATCCCTCTTTTCAAGGTTGAACAAA AACGATGTCTCTTGCTACATTACATAAACCGAAGTTTATGGCTCTTGAAACTTGTTTACAAACAGACTCTATTTATTCAT CTTCCACTTACCTGATGCTTAAATACACACAATATAACTGATACTTAAATACACACAATACCTGGGGAATAGAAGTAGAT GCAAATATTGCTGAAAAATTAGGCATTTAGAACACAATGACCATTAAAACACAGCTTCTTTTTATGGTTAGAATTGGAGA TATTAGATGAGTTAGTTATCCCATATTTGGAAATAATAATTAGAGCTATGAGAGACACAGAAAATCAAGCAAACCTTATA AATACTATGGTGATTTGTGACATTCACATGAGTCTGTGCAATTATAAAATGATATATATCCCACCCCACAAGGCCACAAC CACATTGATCAATTATAGCTTCCACAGAAATTCTAATAATGCTGGTCCAGAATTGAGTTGGCCTCTGATCAGCTTTAACT CAGATGCACAATTTTCTCTGCCCTTCACATTTGTTCTGCAAAAAGGGTTCCTTCTAGTCAGAAAGACAGGTAGTAACCTT CAATATACTCTTTCTCTTTCGTACCTATTTATTACTAGTCTGTTTAGACCTTAGAGGAAGCAAATGGGATCATGAAAAAT GAATAAAAAACGAAATGAATTTTTAAATGATTTAGGTGAAGAAAAAATTATGAAGAAGAGATGAGAGCAGGGAAAGAGAA ACATGGATATATTAATTGTCTTTGAGAAGATTAAAAAATCAAGTTTAAAATGAGGAGAAAATATAAAGAAAAAAAGGATA AAGAAAGGAGGAAGAGAGAAAGTATGGAAATTCCGAATTTGAATAAGGATGGGTAAAATTATAAATAAATAAAAAAGTGG AATTTTCGTCTTACAGGACTAACAGGAGGCTTTTGTCCATGTTGGGATAATAAAAATTCTGTTTTCAAATAGATCGTTTT ACATTTCCTTCTTTTTTTTCTTTCTTATCTTGCTTCCTTCTATCCACCAAATCTTCCTTGCATCTTCTTTTTTTCTCTTT AGATAAATAAAGTACACGCACACGTCAGAACAATGAGTATATTAATCCTTGATGATTTTTATTATTAATTAAATTTTATC CTTTGTTACTCACTTGGGAGAGTTTGTTCCCAAATTGTTGATCTTTAATCTAATATTAATTCTCTTTTTAAGAGAACTTG TTGAGATATGAGAACTTGTTGAGATATGAGAACTTTCGAGAACTTGTTGAAAGCACAATCAAGAGTTATGCGATACCACT TGTTGGATCCATGAGAGGAAATCTCCACACATGAAAAAAGCACACCCACCATAAGAAGTAGAAAAATTAATAATAGATAA AGAACAACTCACAAATTTAACGTGGTTCACACGTCTTACCTAAACTCATGATCTCAGTGACACACACTAAGCCGCAAGTC AATATATCCCAAATGACTAGAATTGTTATAGTTAAGAAAACTCAAATAAACTCTTCATACTTTTAATAACTCTATATTTC CTTTTTTTAGATTACTCGATATGAGACTTGGATAGTTAAGTGCCTACTTTGGCACAACATCCTCTTCCCTCCTCTCCCCT TTCCCCTCAAAGCCTTCTCCTCCCCTCTAAAAAAAAACTCTCATACAAAGTCTTAAAACCCAAAGATACAAATGCACATT GATTGATCTTCCGAAGTTAGAAACTTTAGATGTTCATTATATAAATAGTTTTGTTTTTTTTTTTCGAGAGCGAAAGAATT TATATATAGAGGCACAACTTAAAAAATATTATAGAGAGCAAAGTCCCAACAAGTTGCAATGTACAACGTATATTGAATCA AAAACTGTAACTGTGAAAGATAAAACGCCTAAAGGTCCGGAAAGCCTTGAAAAAAGTCCAAGAAACAAGAATCTTAGCTA GCAAGCCCAACCACATGCAACCCAAAACCAAACAAACCAAACCCACTTTGTCACGCCCGAGAACAGATCTGGCTTGAAAT AACCCCAACTCGAAACAAGGGCATCCTCCTCGACGCCATCAATACCATCAACTTTACCCAACAAAAGGATCGTTGTAGCG CCCGAAGCTCGAGTTTCCAAAACTAGCCCTCGCTACCCCAACCTGAGTCGTTGAAACCCTAGTAGATAGAATCTCGACAA TGAAGGAATAGAACCAGAAGAAAACGAAGGCCCAGGAGCATAGAGCTAGGGGTTGGACCTTTGAGAGAAGGGGAAGGAAG AAGGCATTGGATCTAGGTTGGGAAAGGAGAGGGTGGACGGCTAGAGATACCAATAAAGCAAAATACATCAAAGGAAGGAG GATAGGACTAGGAAAGGAGGTGGAGAGATTAAAAGAGAAGCACAAAAGGGGGTTGCCGCTGCGTAGAGAAGGAAAGCGGC GCGTGCCAACCCAAAGCTGGAACTCATAGAGACCAAGTTTAGAGAGAGAAAAAGTTTCAAGAGATGAAGTGCTCTAAATC GTCGGTTATATCTCTAAGTAGTATTGTTAAACCTTAAATGAGTTAAATCTATTCATCAGGTTAGAGTTACTTGATAAATT AAGAATAAGCAATTAATAATCTTTGAAGTAAAAAAATTGTAACAAGCAAAATTTTAAATAATACAATAATTAGAAAGTTT ATGTTTTTATGTTGAACTATGATTATATTTTTGTCGTAAAACATTACCTTCATTCAAATTAAACCTTATGATTGTCTCTT TATTCCTTATTCTCTAAAACAAGGTCATCTCCAATGCACAACTAAATAAGCAATTGTATTAGAGCATTCCATGCATAACA CATTTCAGTATTGTTGCATTTGAAAAGGGAGGGTAATGATAGCTCATCTTTTCATTTTCGCCAGAAAAGAAAGCTATGAA TGTCCACAATTGGTTTTAAAGTCAAATTTAATTTTAGTAAAAAGCTTCTGTAAATAGCTTTTGAGGATCATATTTGATTA TGAAAAAGATAAAGATGATCCAAACATATGCTTTTAACAACATGAATATTTCCTTTCCATCGATCTCATGCTCTTATCAG TCCTCACCCATGCGTGTTTATCTTTTTACTTCTTCCCATGGTCCTTGCAGCATATATACCTAGATAATTGTAATAATGTT ATATATTGCTTGCATCTGCATGTAGTAACTTATATTGTGATTAATTTTTGTAAATATATTTTACTGAACTTTCTCTCCTA TGGTCTCAGTACTCATTTATTATTATATGATCTTGATATTTTAATTGCAATTATATGATAGTTCACCTTTATTTACATCT TTTATTATTCCTTGAAATTCCTGGCAGTATAGGAGAACGAATACAAGCGATTTCCCGGGATCTGGATGAGCTTAGTCGAG AAGAAAGCCTGTCATCTCAGCATATTGGAAAGCTTACCGAGGTTGTGACCTAATCCTCTCTTCTGCTACACTAATATATT GCTAGGTCACTCATTTGTTAAATTTTTTTTTTGATAAGTCAAAATATATTAGATGGAAGTATAAGGGGTACTTCAATCCC AATACATGTAGAGAAATAAATTACAAGAAAACAAGGGAGTTAAAACCAGAACTAAGAAACTCCAAAACCAAGAACCACTC CTCAGATACATAAAAAATAACCCCAATCTATACCACTACGTAGGCCATGGTATCATTCTAACAGCAGCAACACTAGATGA TACCCAAATTGTTGGAAAATTCAAGCATGTAATTGATGTTTCAAATTGATTAAGAATGAGTGAGGTGAAGATCATATAAG AGATGTGTGTGACCCATAAATCTATTCTCTTAAAATTTTTGGTAAAAATGTGGTGTTTGAATCTCATGGTGTTCTTCTGT ATTGACCCCATTTGTCCATGTTGTGTTCTATGAGGCTCCTTTGACTCCCCAACAAGCAAAGGCCATGTACATATAAATAA TCCCATTGCAAAATACATCTTTTACTTTGAAATTGGTTAGTTACCAGATTTTAGGTATATTATAAGACTTAGCTGTATGA AAATGATTGGTTTGTGCAGGAAAGAAACTACATACAATCAAGAAGCTTCAAGGATCAAAGTTTAGCCTGTCAGAACCCAA GCTTGGAGTTCACCTTAGGAAGACCAAATTGGCACATCAATGAACATGCTTGATTTTAGTTAGTTTACATAACCCAAGTA TGGCTTTACTAGCCAAATAAGAAGGAAAAAGAGGAAAGACTAATGCACTGATATATATAAATAGGTAGTGCTTTTGTCAA GACGAAGATGTCACTTTCCACAAATCTAAAGCAACTCTTGTATATTCTTTTTGAGGCCAAAGCTTGCTAGCCATTATATA AATGTTATAGTTAAAAGTAAAAGTTGAAAGAAAAGAAGGAAGCAGGTGTATTATAAGGCTTTTGTTCCGTCTTTTATTTT CTTTCCTTTACCCTAGGTTCCTACTGATTTGTCCATATATATCTTTCTCTTCCTAATTCTTGAACCTTGAATTGGGTGAC CATGACTGCGCTTGTAAGAGTTTATTTGAGTCTATCTTATAGTATATGTGTTTATATAAATGTTTGAATTATTAATTTAT GTAAATAATTTATGACATTTCTACAATATGGTGCATTGATTTTATTTTTAAAAGTCATTCAGATTTTATTTTAAGCGTTT ATACCTGCGTATAATATATAGTCTTGATCTTATTTCAATAAGTTTCTCAAATTAGTTTTTTAAAGCCAAAAGTCGGAAAG CTTGATAGCTGTTATCTATCATTAGGATACTTTGTTCCTTGATTTTATACTTGACTTTATGCACAAGAGATCAAAGCTAA AAAGC 

CDS sequence (LotjaGi2g1v0190600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCTCAGAATCTAATTCCTGATCTTTCACTGCACATTAGCCTCCCAAACAGTGCTCCATCTTCAATTTGCACAAATGA AAGGGATGATGATTCAGCCTTTGATATATGGAGATCTTCAGCTGAAGAAGAAGGTGAATATGGCTTCAAATCTCACAGTG ATGGTTCAATCAAAGGTAGCAGTAACATAGAGCTGAGTCTAGGGAACCCCACAAGTACTACTCCCTCTGAAGCTGAGAGC CCCTGGAGGAGAAGTAGAAACTTTGTTAGAGCAACACAAGAGAGGCAAACAACAACAAATCATGGTGAGGTTTCAGAGGG TGTAAGAAGAGTTATAACAACACCCTTCAATGGAATCCCTTTTTATAATAGTAACAATTCCTCAACAGAGAGGGTTTCTT CTCTCTATGCACCACTTCCATTACCATACCCTTCTTGTTCCCCCAATAATGATGCTACTGTTGGGGGTGTAAGTGTAACT CCAATCTCAAGGTTTAATGGGATAACCATGGAGAATCTAAGACCTAATCAGCAATTTCAGTACTTGAACCATCATCATCA TCATCAACAACAACTTCTTCATAATCATCATCAGAATCAGCAGCAGTTTGGGACTAATGGAGTGTCTGATTTTGCAAATG GATTTATGAGGTCAAGAATGTTCAATACTCCAAAGCTGCAAAGTAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACT AGCTCTCTTCACAATCGCTTTGTTCATGCTGTTGAGCTTCTTGGGGGCCATGAAAGGGCTACTCCAAAGTCAGTTCTGGA GTTGATGGATGTTAAAGATCTAACACTTGCTCATGTCAAGAGCCACTTGCAGATGTATAGGACTGTTAAAAACACTGACA AGCCAGCAGCTTCCTCAGATGGAGATGAGGATTTCATATCCCTAACACCACCACCCATTAATCAAAGCAAGAACAATTAT TTACCAAATCAAAGGGGTCCTCTAAATGCACCTCAAAGTCATGATGATATGGCCCACACTTCAAGTAATCTATGGGCTAA TTCTTCTTCTTCCAGTATAGGAGAACGAATACAAGCGATTTCCCGGGATCTGGATGAGCTTAGTCGAGAAGAAAGCCTGT CATCTCAGCATATTGGAAAGCTTACCGAGGAAAGAAACTACATACAATCAAGAAGCTTCAAGGATCAAAGTTTAGCCTGT CAGAACCCAAGCTTGGAGTTCACCTTAGGAAGACCAAATTGGCACATCAATGAACATGCTTGA 

Protein sequence (LotjaGi2g1v0190600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPQNLIPDLSLHISLPNSAPSSICTNERDDDSAFDIWRSSAEEEGEYGFKSHSDGSIKGSSNIELSLGNPTSTTPSEAES PWRRSRNFVRATQERQTTTNHGEVSEGVRRVITTPFNGIPFYNSNNSSTERVSSLYAPLPLPYPSCSPNNDATVGGVSVT PISRFNGITMENLRPNQQFQYLNHHHHHQQQLLHNHHQNQQQFGTNGVSDFANGFMRSRMFNTPKLQSKRNMRAPRMRWT SSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFISLTPPPINQSKNNY LPNQRGPLNAPQSHDDMAHTSSNLWANSSSSSIGERIQAISRDLDELSREESLSSQHIGKLTEERNYIQSRSFKDQSLAC QNPSLEFTLGRPNWHINEHA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 4 419 416 2.5E-110
PANTHER 4 419 416 2.5E-110
MobiDBLite 60 104 45 -
MobiDBLite 60 81 22 -
Gene3D 231 292 62 7.9E-25
SUPERFAMILY 232 289 58 1.16E-15
TIGRFAM 235 288 54 6.6E-24
Pfam 236 287 52 9.3E-6
MobiDBLite 292 349 58 -
MobiDBLite 309 349 41 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0190600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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