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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0200000 |
Transcript ID | LotjaGi2g1v0200000.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT1G73690.1 cyclin-dependent kinase D1;1; Swiss-Prot: sp|P29620|CDKD1_ORYSJ Cyclin-dependent kinase D-1; TrEMBL-Plants: tr|A0A1J7HGF0|A0A1J7HGF0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0200000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:63743707..63749998) extracted from Lotus japonicus Gifu genome v1.2.
CTCCACACCAAAGTATAAAAGATACCTAACCTTCCTTAAACACCTTTAAAATCATTTTATAGACCAAAACAAGGGTATAT AGCCGTTGCTAGTCTCTATCTCACACACACGCTCCCACTCAGGTTTCAGCTACGCTCTTTCTCGCATCTTCCTCTTCTCT CACACCCACAGTCCCACAGTAACAACAAAACCTCTCTTTCAAATTTCAATGGTGCTTTTCTACCACACTATATAACCCTA ATCAGCTCCACAATCACCCACTTCTCAATTTCCGAATTTTCAGCTCAATTTCATCCCAAATCGATAATTCATCGATCTTT CCCCCTCAAACCCTAACAATTTTCCCGATGAACCATTTGTAAATTCGCTTAACTTCTGCTGTAATTGACAGTTTAATAGC ATCTCACGACCAATTTGCAGAGATGGCAGAAAACGATCCTTCCAAGAAAGTAGCTGATAGGTATCTCAGGCGTGAAGTCC TTGGTGAAGGTACCTATGGTGTTGTGTACAAAGCCATTGATACCCAGGTAGCTTTTCTCTTTCTACAGTTAACTTGTTTT GCTTTTTTTTTTTTTATGTGTATATATTTTATAACAATTATGATGATTTTTCAGTGGAAAAATATGAGATTTTTGCATGT ATTTTTTCTGGGTTGTGAGAATTAGGCATGTGAATTAAGTTTAGTTAGAGAAATTTCAACATGTTATAGTTTATGATTAA TTTCAAAATGATTTAAACAGATATGAGTGAATATTACTCTTGTTTCAATATGTTATAGCTAAAGATGAGGTTAGCCAAAT CTATGAATAAGAGAAAAGGGAAACACTTAATTTCATAAAAGTTAGAACTCTGCAGTAATGTGGAAAGGGAATATTCATTT ATATGCCTCTAAAGTTGTTTAAGCATGGTTTTGATCAGGTGAATTGTTCTTGCAATTTGAGAATCCCAATAATGAAACTG GAGATATGTTACATTGCATACATGTGTTTATGAACCAGCTTTCTACTCAATAATGAAGAAGGTGTTGCTTTAGTAGTTTA GTGCTATTATATTTGTTATTTTGTGGTGTTTTTAATGATGAACTCATTGCATGGACAGACAGGACAAACGGTTGCCATTA AAAAGATTCGGCTTGGCAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGGGAAATTAAACTGCTTAAAGAGCTTAAA GATCCAAACATTATTGAGTTGATTGATGCGTTCCCACATAAAGGGAATTTACATCTTGTGTTTGAATTCATGGAGACAGA CCTCGAAGCTGTCATAAGAGACCGGAACATTTTCCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATGACGCTGAAAG GTCTTGCTTTTTGCCACAAGAAATGGGTTTTGCATAGGTAGGTTATATTACTGATTTGATCATTACAAAATTGTTACCTG CCTTTAGTTCTGAGCTGAAAAGTTTCGTTATGTATTTTCAGAGATATGAAACCAAATAATTTGTTGATAGGACCTAATGG ACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGATATTTGGAAGCCCAGATCGCCGGTTCACTCATCAGGTTAGTTTCG TTATAACTAGCAATTATCTCATGTATTGCACGATTTTTCTTAATTTACATTCATGTTAAAAGAGAATATTGAACAGATAG AGTATTTAAAAATATAAAGGAAATATGTATGAGTTATGGAGATGAGGCATTTTAAATTGTGAGAAAAACTGTGAAAATAA ATTGTGTGAATTAAGACACGCCATCATTTTTGTTTATGTATTTGATACAGACATACAGTATGTCAAAATTTAAATTTATA AACTTCAAATTTATGGTTATAGTAAGTTTTGGCATTGACAATTAAAAAAATATATGATTGATGTCTATATTTAATCAAAA CTATTTGAGGAATAAAAAATACTAAAATGTGAAATTGAGATCGAGAGTGGATCAGGAGTAGTACTCACTCTCAAGAGTGA ATTGTCAAACTTAATATATTTGGGTAGATAGCATATGATTTCCTTTGAGTATGTCTGAGGACTTTGGAAATGAACTCAGT TCTTTTTGATAAAACTCAGCATTCTGAGTAAACTGAGATTGTACTTAAATCACACTGTTAATTACTTAATTATACTACTT TCTGAAGATTCATTTAGAAACTAGCAAACTTTACTAAAATGTGGATGGTTCAATTTGCAAGACTAGGTAGGGATGTATAG GGATGTATCTTAGACTTTTTAGTCAGGTTTGACTTATACGTTGATTTAGTTTGAATTTATACAAAAACAAAGGGTGTAAG CAGTGTTCTAGTGTGAAGTGAGGCACGCAGCTGCAAATTGTCGTGGTGCGAGGCCGTGAAATGAAATGGATTTTGGTGGG TGAGGATCATCAGATCTGGGTGAGGCCTTGATGGTGAGGCTTTGGGGACATTGGGAGGAGGTGAAATGTTTGTGATAAAA ATGAATTAGAATTCACATCTGTGTTGGAGTGCTTGTGTGGTTATGAATTAAAACGGTATAGTCTATTAACATTTGTTAAA ATGGAAATATTCATATTATATTAATTATTATTGGATTCTCTGGTTTATGTTATGTGAAATCTGATCAGGAGGAAATGGTA CATAATTTGGGATAAATAGTTTTTTTTTTAACACAGTGTGAAAGTATAAAGAAAAATCATGCTGCAACACGCATCAGAGT GACCGCATTGTCCACATTCGCAGCAGCAGCCGCAACCGTAATTTAAAACACTGAGTGTTAGAACTCAGTGTTTACCTCTA AATCTCCACTATTATTGCCTTTTTCTGTCCTAGAACTACAAGGGGAGGGAAAAAGTTCTGGAATACTTGGTTTTGGTGCA TGTGTTCTAGGATTGTGGTTCTGTAGTATAGCCAATTAACCATGCCTTGGATGACTCTGAAGAGTAGAGTAATGTTAAAC AAGTAGCTGCTTATTCACTAACTTATATGGGATAAAAAGGCTTCTTTTGAAACCCTTGCTTCCTTCCAATTTAATGGTCT CTTCGATATGTTTCATCCTTATATCTGTATTTTGTACTTTCTTTAATGGATCTACTGAATTGACACTTGTGCATGAATAG GTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGTACAAAGCAATATGGTTCAGGGGTAGATGTCTGGGCTGC AGCTTGCATATTTGCTGAACTCCTCCTTCGTCGGCCCTTTCTTCAGGTAAACCAAGATTGTCATGGTGAATAGAATATAT GGAATGTTTTTTTTATGGTAAATCAAATATTGATGTTCCGGAATGATGGATGTTTTTACTGGCAATTTTACTGTGTAACA TTTTTTTTTGGGGTATGATATAAACCATTTAAGTTTATCATCCAGTTCAAATTGTAGCCTGAATAAAAACTTCAAAGCTG GGGTTTTACTTAACTGAGATTAGATTAGAAGCTGTTGGCTATGTTATTTAAAGACATTATTGTCTATTAAATTTGACTTG CATCTTTTTCCTGTCCTAATATATTTTATCTAGCTGTTTTCTGGTTTATAATATCTTAGTGACTAGATGTTACCTATAGG ATTGGTTGATTTTATTCTTTTGTTTCTGCTTGCTTGCATCCTTTCTTCTAGTAATTCTATGTCTTTGCTTTTAACATTTG CCAGGGTTCAAGTGATATTGATCAATTAGGAAAGGTTTTTGCAGCGTTTGGAACTCCATCACCCTCTCAGTGGCCTGATA TGGTATACCTTCCAGATTATGTTGAATACCAATATGTTCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGAA GATGCTTTAGATTTGTTGTCAAAGATGTTCACATATGATCCGAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAG GTATGTATGTGCCTTAAACATCCCATGTAGAAAAAAAAAAATCCTTCCCTTCTCCTAATTTTAATGCCTCTTCTTCTACT GTAGGTACTTTTCTTCTGCGCCTCTGCCTACAGTTCCCGACAAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCT CAAGATTTCAATCCTCATGAGGGTCCCACTGTCTTATCACCTCCAAGGAAGTCTAGAAGAGTGATGCCAGGCCGTGATGG GTTTGAAGGAAATTCTTTGCAAGGGGAGGACAAGATTGATGACGATGTTGGTAATTTCAAGCAAACAGCTGGTGATAATA CAGGCAAGAATGAGCCGGCACCAATGTCTCTAGATTTTTCTCTCTTCGGATTAAAACCTCCAAATAGACCAACAATTAAC AGGTATGACAACATTAATCATCCAATAATTTCAAAGTGACTTAATAATTTGCATTTTGTAATTTTATCCGCATCAAACAT AAAAAAGTGGTTGATTTTATTCTGAGCTTGCATAATGAACCATAAACCTTTTATTATTGTTATTGAGGCTGGAAGATAAG TATTGCTTTACACTGCATGGTTTGTTGTACGTATTATCCTTGAATCTTGACTAATTTTGTGAAGGTGATTGATGCTGTCT GCCAAATTGAATGTTAATGTTTAGTAAAAATTTGCTAAATCAAAATGTTGTAGCTATGGAAAAACAACTAAACTAATAGA TAGTTACCGTAGTACTGCACTATCCTGCTTACTGACAATTTATGCCAAACTTTTGAAACTAAGTTGGTTTATGATCTTCA TTTTTATTTATAACTGGGATTGTGAAGACCCAAATTGCTATTGACTTATTGTAGTTTAGTTAGCATGCTTATTTTCTATG TTGGAATTTGTCACATTATGAGTAATGATTCATAGACATCTAAATAGTAGAAACACCCCAAACACCCCTTTTTCCTGCGG ATTTGGCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAGCACATAACCGTGTAAAGTTGAAA TTCCTAAATTAGGGATTTGGCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAGCACAGATTG GCCAAATAATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAGCACAGAACCGTGTAAAATTGAATTTATG AATTTCAACTGAGTTTACACGGTTATGTGCTTTATGGTTAGTCATGTGTATTTAGGTGGTTAGTTCAGTGTATTATTTGG CCAAATCCCCAGGAAAAAGGGGTGTTTGGGGTGTTTCTACTATTTAGATGTCTATGAATCATTATTCGTCACATTATGAC TCAGTGGAAGGGAAAACAGAATGCAATTTCATGGTGTTTAATAATGCAAGAGTGTGTCAAATGTTTGTTCCCTTTTAATT TCTACTCTTAAATGATACTATTTATTTAGTTCCTTTTTTTTGTTCTGCAGTGCTGACAGATCACATTTAAAAAGAAAATT AGATCTAGAATTCCAGCATGACTAGTGCGTGAGTACAAGGGGTTTGTTGCATCTGAGGAAATGCTGCAATTCGGCTTTGC TTCTGTATCATTCCTTATCCCTCTCTTAGCATGAAGCCTACTATGAATGTGTAATGTCTAAAGGATGAAGTAGTAGGGGC AGCAATTAGCATCTCACTTTAATTGTACCGTTCAGAGACACAAAGTAACTATCATAGGAAAAAAAACTATAGTAAACAAA CTCTCTGAATCCCTTTGTTCTTAATTCTTGTTCCTCATGCACAAGAGAATCTGTACAAGTCCACGGAAGGCCTTTGAGTG AGGGCATTTTCTTGAGCCTTTGCTATATCTGACGCATGAAACAGAATCTTAACATTTATTTTGTTATTGAACATTAAGAG AAATTATTCTTTACACTTTTGAGTGTATAATATGTATTTTCTCACAAGGTGGTTTGAAGTTTGCTGCTTGCTTTCATTTA TTTAGGCGTAATGTGTTTGTTTCATTTGTTAATAGGATGAGTGCTCCTTGTTTTTTTCAATGTGCAGAATCTTGAATTAA ATTTGTTTTACAAGCTAATAGTTTTGCTGTTGCTGATGTTTCTGTCTGGGTACAAATGAGATTTCAGTAGATGCTGGGAA TTGCTTGAACTTTATGCATGTTGGTTCTCTCTACTTTAAGCCTTACATTGATCCTAACTAGTGCTCTCAAAACCTTTATC TCCATAAAACTCACTAAAATCCTTTTCACTCCCAAATTAAAAAATGAATCCCCCTAATTCTTGCCATCACAATATGAATT CCTTTAATTTCATTCCCTCATTGAAAACAATCATTCCTGATTTAATTCTGCA
CDS sequence (LotjaGi2g1v0200000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAAACGATCCTTCCAAGAAAGTAGCTGATAGGTATCTCAGGCGTGAAGTCCTTGGTGAAGGTACCTATGGTGT TGTGTACAAAGCCATTGATACCCAGACAGGACAAACGGTTGCCATTAAAAAGATTCGGCTTGGCAAGCAGAAAGAAGGGG TGAATTTTACAGCTCTTAGGGAAATTAAACTGCTTAAAGAGCTTAAAGATCCAAACATTATTGAGTTGATTGATGCGTTC CCACATAAAGGGAATTTACATCTTGTGTTTGAATTCATGGAGACAGACCTCGAAGCTGTCATAAGAGACCGGAACATTTT CCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATGACGCTGAAAGGTCTTGCTTTTTGCCACAAGAAATGGGTTTTGC ATAGAGATATGAAACCAAATAATTTGTTGATAGGACCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGATA TTTGGAAGCCCAGATCGCCGGTTCACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGTACAAA GCAATATGGTTCAGGGGTAGATGTCTGGGCTGCAGCTTGCATATTTGCTGAACTCCTCCTTCGTCGGCCCTTTCTTCAGG GTTCAAGTGATATTGATCAATTAGGAAAGGTTTTTGCAGCGTTTGGAACTCCATCACCCTCTCAGTGGCCTGATATGGTA TACCTTCCAGATTATGTTGAATACCAATATGTTCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGAAGATGC TTTAGATTTGTTGTCAAAGATGTTCACATATGATCCGAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAGGTACT TTTCTTCTGCGCCTCTGCCTACAGTTCCCGACAAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCTCAAGATTTC AATCCTCATGAGGGTCCCACTGTCTTATCACCTCCAAGGAAGTCTAGAAGAGTGATGCCAGGCCGTGATGGGTTTGAAGG AAATTCTTTGCAAGGGGAGGACAAGATTGATGACGATGTTGGTAATTTCAAGCAAACAGCTGGTGATAATACAGGCAAGA ATGAGCCGGCACCAATGTCTCTAGATTTTTCTCTCTTCGGATTAAAACCTCCAAATAGACCAACAATTAACAGTGCTGAC AGATCACATTTAAAAAGAAAATTAGATCTAGAATTCCAGCATGACTAG
Protein sequence (LotjaGi2g1v0200000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAENDPSKKVADRYLRREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAF PHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARI FGSPDRRFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKVFAAFGTPSPSQWPDMV YLPDYVEYQYVPAPPLRSLFPMASEDALDLLSKMFTYDPKVRISVQQALEHRYFSSAPLPTVPDKLPRPAPKKESRAQDF NPHEGPTVLSPPRKSRRVMPGRDGFEGNSLQGEDKIDDDVGNFKQTAGDNTGKNEPAPMSLDFSLFGLKPPNRPTINSAD RSHLKRKLDLEFQHD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 399 | 395 | 2.4E-203 | – | |
PANTHER | 5 | 399 | 395 | 2.4E-203 | – | |
SUPERFAMILY | 10 | 301 | 292 | 4.45E-95 | ||
Gene3D | 11 | 94 | 84 | 2.5E-30 | – | |
CDD | 13 | 307 | 295 | 0.0 | – | |
ProSiteProfiles | 14 | 294 | 281 | 44.527 | ||
SMART | 14 | 294 | 281 | 1.0E-94 | ||
Pfam | 16 | 294 | 279 | 9.6E-71 | ||
ProSitePatterns | 20 | 44 | 25 | - | ||
Gene3D | 95 | 310 | 216 | 7.1E-65 | – | |
ProSitePatterns | 132 | 144 | 13 | - | ||
MobiDBLite | 300 | 403 | 104 | - | – | |
MobiDBLite | 348 | 362 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0200000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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