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LotjaGi2g1v0200000.3

Overview

Field Value
Gene ID LotjaGi2g1v0200000
Transcript ID LotjaGi2g1v0200000.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT1G73690.1 cyclin-dependent kinase D1;1; Swiss-Prot: sp|P29620|CDKD1_ORYSJ Cyclin-dependent kinase D-1; TrEMBL-Plants: tr|A0A1J7HGF0|A0A1J7HGF0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0200000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:63744129..63748290) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCAGAAAACGATCCTTCCAAGAAAGTAGCTGATAGGTATCTCAGGCGTGAAGTCCTTGGTGAAGGTACCTATGGTGT TGTGTACAAAGCCATTGATACCCAGGTAGCTTTTCTCTTTCTACAGTTAACTTGTTTTGCTTTTTTTTTTTTTATGTGTA TATATTTTATAACAATTATGATGATTTTTCAGTGGAAAAATATGAGATTTTTGCATGTATTTTTTCTGGGTTGTGAGAAT TAGGCATGTGAATTAAGTTTAGTTAGAGAAATTTCAACATGTTATAGTTTATGATTAATTTCAAAATGATTTAAACAGAT ATGAGTGAATATTACTCTTGTTTCAATATGTTATAGCTAAAGATGAGGTTAGCCAAATCTATGAATAAGAGAAAAGGGAA ACACTTAATTTCATAAAAGTTAGAACTCTGCAGTAATGTGGAAAGGGAATATTCATTTATATGCCTCTAAAGTTGTTTAA GCATGGTTTTGATCAGGTGAATTGTTCTTGCAATTTGAGAATCCCAATAATGAAACTGGAGATATGTTACATTGCATACA TGTGTTTATGAACCAGCTTTCTACTCAATAATGAAGAAGGTGTTGCTTTAGTAGTTTAGTGCTATTATATTTGTTATTTT GTGGTGTTTTTAATGATGAACTCATTGCATGGACAGACAGGACAAACGGTTGCCATTAAAAAGATTCGGCTTGGCAAGCA GAAAGAAGGGGTGAATTTTACAGCTCTTAGGGAAATTAAACTGCTTAAAGAGCTTAAAGATCCAAACATTATTGAGTTGA TTGATGCGTTCCCACATAAAGGGAATTTACATCTTGTGTTTGAATTCATGGAGACAGACCTCGAAGCTGTCATAAGAGAC CGGAACATTTTCCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATGACGCTGAAAGGTCTTGCTTTTTGCCACAAGAA ATGGGTTTTGCATAGGTAGGTTATATTACTGATTTGATCATTACAAAATTGTTACCTGCCTTTAGTTCTGAGCTGAAAAG TTTCGTTATGTATTTTCAGAGATATGAAACCAAATAATTTGTTGATAGGACCTAATGGACAGCTGAAACTTGCAGATTTT GGTTTAGCACGGATATTTGGAAGCCCAGATCGCCGGTTCACTCATCAGGTTAGTTTCGTTATAACTAGCAATTATCTCAT GTATTGCACGATTTTTCTTAATTTACATTCATGTTAAAAGAGAATATTGAACAGATAGAGTATTTAAAAATATAAAGGAA ATATGTATGAGTTATGGAGATGAGGCATTTTAAATTGTGAGAAAAACTGTGAAAATAAATTGTGTGAATTAAGACACGCC ATCATTTTTGTTTATGTATTTGATACAGACATACAGTATGTCAAAATTTAAATTTATAAACTTCAAATTTATGGTTATAG TAAGTTTTGGCATTGACAATTAAAAAAATATATGATTGATGTCTATATTTAATCAAAACTATTTGAGGAATAAAAAATAC TAAAATGTGAAATTGAGATCGAGAGTGGATCAGGAGTAGTACTCACTCTCAAGAGTGAATTGTCAAACTTAATATATTTG GGTAGATAGCATATGATTTCCTTTGAGTATGTCTGAGGACTTTGGAAATGAACTCAGTTCTTTTTGATAAAACTCAGCAT TCTGAGTAAACTGAGATTGTACTTAAATCACACTGTTAATTACTTAATTATACTACTTTCTGAAGATTCATTTAGAAACT AGCAAACTTTACTAAAATGTGGATGGTTCAATTTGCAAGACTAGGTAGGGATGTATAGGGATGTATCTTAGACTTTTTAG TCAGGTTTGACTTATACGTTGATTTAGTTTGAATTTATACAAAAACAAAGGGTGTAAGCAGTGTTCTAGTGTGAAGTGAG GCACGCAGCTGCAAATTGTCGTGGTGCGAGGCCGTGAAATGAAATGGATTTTGGTGGGTGAGGATCATCAGATCTGGGTG AGGCCTTGATGGTGAGGCTTTGGGGACATTGGGAGGAGGTGAAATGTTTGTGATAAAAATGAATTAGAATTCACATCTGT GTTGGAGTGCTTGTGTGGTTATGAATTAAAACGGTATAGTCTATTAACATTTGTTAAAATGGAAATATTCATATTATATT AATTATTATTGGATTCTCTGGTTTATGTTATGTGAAATCTGATCAGGAGGAAATGGTACATAATTTGGGATAAATAGTTT TTTTTTTAACACAGTGTGAAAGTATAAAGAAAAATCATGCTGCAACACGCATCAGAGTGACCGCATTGTCCACATTCGCA GCAGCAGCCGCAACCGTAATTTAAAACACTGAGTGTTAGAACTCAGTGTTTACCTCTAAATCTCCACTATTATTGCCTTT TTCTGTCCTAGAACTACAAGGGGAGGGAAAAAGTTCTGGAATACTTGGTTTTGGTGCATGTGTTCTAGGATTGTGGTTCT GTAGTATAGCCAATTAACCATGCCTTGGATGACTCTGAAGAGTAGAGTAATGTTAAACAAGTAGCTGCTTATTCACTAAC TTATATGGGATAAAAAGGCTTCTTTTGAAACCCTTGCTTCCTTCCAATTTAATGGTCTCTTCGATATGTTTCATCCTTAT ATCTGTATTTTGTACTTTCTTTAATGGATCTACTGAATTGACACTTGTGCATGAATAGGTGTTTGCTCGGTGGTATAGAG CACCTGAGCTATTATTTGGTACAAAGCAATATGGTTCAGGGGTAGATGTCTGGGCTGCAGCTTGCATATTTGCTGAACTC CTCCTTCGTCGGCCCTTTCTTCAGGTAAACCAAGATTGTCATGGTGAATAGAATATATGGAATGTTTTTTTTATGGTAAA TCAAATATTGATGTTCCGGAATGATGGATGTTTTTACTGGCAATTTTACTGTGTAACATTTTTTTTTGGGGTATGATATA AACCATTTAAGTTTATCATCCAGTTCAAATTGTAGCCTGAATAAAAACTTCAAAGCTGGGGTTTTACTTAACTGAGATTA GATTAGAAGCTGTTGGCTATGTTATTTAAAGACATTATTGTCTATTAAATTTGACTTGCATCTTTTTCCTGTCCTAATAT ATTTTATCTAGCTGTTTTCTGGTTTATAATATCTTAGTGACTAGATGTTACCTATAGGATTGGTTGATTTTATTCTTTTG TTTCTGCTTGCTTGCATCCTTTCTTCTAGTAATTCTATGTCTTTGCTTTTAACATTTGCCAGGGTTCAAGTGATATTGAT CAATTAGGAAAGGTTTTTGCAGCGTTTGGAACTCCATCACCCTCTCAGTGGCCTGATATGGTATACCTTCCAGATTATGT TGAATACCAATATGTTCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGAAGATGCTTTAGATTTGTTGTCAA AGATGTTCACATATGATCCGAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAGGTATGTATGTGCCTTAAACATC CCATGTAGAAAAAAAAAAATCCTTCCCTTCTCCTAATTTTAATGCCTCTTCTTCTACTGTAGGTACTTTTCTTCTGCGCC TCTGCCTACAGTTCCCGACAAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCTCAAGATTTCAATCCTCATGAGG GTCCCACTGTCTTATCACCTCCAAGGAAGTCTAGAAGAGTGATGCCAGGCCGTGATGGGTTTGAAGGAAATTCTTTGCAA GGGGAGGACAAGATTGATGACGATGTTGGTAATTTCAAGCAAACAGCTGGTGATAATACAGGCAAGAATGAGCCGGCACC AATGTCTCTAGATTTTTCTCTCTTCGGATTAAAACCTCCAAATAGACCAACAATTAACAGGTATGACAACATTAATCATC CAATAATTTCAAAGTGACTTAATAATTTGCATTTTGTAATTTTATCCGCATCAAACATAAAAAAGTGGTTGATTTTATTC TGAGCTTGCATAATGAACCATAAACCTTTTATTATTGTTATTGAGGCTGGAAGATAAGTATTGCTTTACACTGCATGGTT TGTTGTACGTATTATCCTTGAATCTTGACTAATTTTGTGAAGGTGATTGATGCTGTCTGCCAAATTGAATGTTAATGTTT AG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0200000.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGAAAACGATCCTTCCAAGAAAGTAGCTGATAGGTATCTCAGGCGTGAAGTCCTTGGTGAAGGTACCTATGGTGT TGTGTACAAAGCCATTGATACCCAGACAGGACAAACGGTTGCCATTAAAAAGATTCGGCTTGGCAAGCAGAAAGAAGGGG TGAATTTTACAGCTCTTAGGGAAATTAAACTGCTTAAAGAGCTTAAAGATCCAAACATTATTGAGTTGATTGATGCGTTC CCACATAAAGGGAATTTACATCTTGTGTTTGAATTCATGGAGACAGACCTCGAAGCTGTCATAAGAGACCGGAACATTTT CCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATGACGCTGAAAGGTCTTGCTTTTTGCCACAAGAAATGGGTTTTGC ATAGAGATATGAAACCAAATAATTTGTTGATAGGACCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGATA TTTGGAAGCCCAGATCGCCGGTTCACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGTACAAA GCAATATGGTTCAGGGGTAGATGTCTGGGCTGCAGCTTGCATATTTGCTGAACTCCTCCTTCGTCGGCCCTTTCTTCAGG GTTCAAGTGATATTGATCAATTAGGAAAGGTTTTTGCAGCGTTTGGAACTCCATCACCCTCTCAGTGGCCTGATATGGTA TACCTTCCAGATTATGTTGAATACCAATATGTTCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGAAGATGC TTTAGATTTGTTGTCAAAGATGTTCACATATGATCCGAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAGGTACT TTTCTTCTGCGCCTCTGCCTACAGTTCCCGACAAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCTCAAGATTTC AATCCTCATGAGGGTCCCACTGTCTTATCACCTCCAAGGAAGTCTAGAAGAGTGATGCCAGGCCGTGATGGGTTTGAAGG AAATTCTTTGCAAGGGGAGGACAAGATTGATGACGATGTTGGTAATTTCAAGCAAACAGCTGGTGATAATACAGGCAAGA ATGAGCCGGCACCAATGTCTCTAGATTTTTCTCTCTTCGGATTAAAACCTCCAAATAGACCAACAATTAACAGGTATGAC AACATTAATCATCCAATAATTTCAAAGTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0200000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAENDPSKKVADRYLRREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAF PHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARI FGSPDRRFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKVFAAFGTPSPSQWPDMV YLPDYVEYQYVPAPPLRSLFPMASEDALDLLSKMFTYDPKVRISVQQALEHRYFSSAPLPTVPDKLPRPAPKKESRAQDF NPHEGPTVLSPPRKSRRVMPGRDGFEGNSLQGEDKIDDDVGNFKQTAGDNTGKNEPAPMSLDFSLFGLKPPNRPTINRYD NINHPIISK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24056:SF431
5 398 394 5.9E-203 –
PANTHER
PTHR24056
5 398 394 5.9E-203 –
SUPERFAMILY
SSF56112
10 301 292 4.18E-95
IPR011009
Gene3D
G3DSA:3.30.200.20
11 94 84 2.5E-30 –
CDD
cd07841
13 307 295 0.0 –
ProSiteProfiles
PS50011
14 294 281 44.527
IPR000719
SMART
SM00220
14 294 281 1.0E-94
IPR000719
Pfam
PF00069
16 294 279 9.1E-71
IPR000719
ProSitePatterns
PS00107
20 44 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
95 310 216 6.8E-65 –
ProSitePatterns
PS00108
132 144 13 -
IPR008271
MobiDBLite
mobidb-lite
300 377 78 - –
MobiDBLite
mobidb-lite
348 362 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0200000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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