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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0200400 |
| Transcript ID | LotjaGi2g1v0200400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT5G52450.1 MATE efflux family protein; Swiss-Prot: sp|Q9FHB6|DTX16_ARATH Protein DETOXIFICATION 16; TrEMBL-Plants: tr|I1L482|I1L482_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0200400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:63801957..63804999) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAATTCTACATCCATTCAATTTTTCAAAAAGTAATTTCTTAAAGGAACTTGTTCACAAAACAAAATAACAGATTTG TTTATTAATCCTATGTTAACTTGTTCACCAAACTTCACATAGAATTAGTCCTTAAGGCTGCAAACTATGTCAAGGGCAAC AGAAAGAACAGAAGTTCTTGAAGAAGTGAAGAAACAGTTATGGCTAGCAGGACCTTTAATAGCTGTGGGCCTCCTAAATT ATTTCCTAAATGTTATATCTGTCATGTTTGTTGGACATCTCAGTGAGTTGGATCTCTCAGGTGCTTCCATGGCCACTTCT TTTGCATCAGTGACAGGTTTCACTTTATTGGTGAGTTCGGTTTTCCTTAAACTCCCCTTTCAGATTGATAGCTTGTAGTA TAGTACCCTTTTTAATGAATAAGAATCTCAGTTCTGTGTTGGTCGGTTGTGAAAGGTTATATATAGCTCTGAGCACTATT TATTCTTGATAGAATCTAGTCTTACATTGAGTTTATACACTCAATTTCTACACTCGCTTATTACATGCAAGTCTTTTTTT TCATAGAATGTAATAAAAAGATGATGTGCTTTATAAAGTTTTCCTTTATTATTTTGTTTGCTTAATTTTGAAGATCATTA ACATTTTGGAACTAAGAACTGTCAGAGAAATATATATAAATTCAATACAATTAGTTTAAAATAAAGCAGCTAAGCTGAAC TAATATCAATTATTGTGAGTGTCAGTCTGTCAGTGTGTGAAGTGTATAATGTTTACCCTACAAATTGCAAACTTATCTTT TCAAGGAAACAACTAATAAGTAGGCACGCAATGAAATGTGATCACAGTTATTTTATTGTTTCTCTGATGATTATTGGTTA AAACAGACAGGAATGGCAAGTGCCTTGGACACCTTATGTGGCCAGTCATATGGAGCAAAGCAGTATCAGAATTTAGGCAT ATACATGCAGAGGGCCATGGTCGTTCTTACAGTTGTAAGCATTCCAGTAGCAGTTATTTGGGCAAATACAAGATTCATTC TTGTTTTCCTTGGCCAAGATCCTGAGATATCTGCAGCAGCTGGGGAATATGCTAAGTTAATGGTTCCAAGCCTTTTTGGT TATGGTCTTTTGCAGTGCCTAAATAGATTCTTACAAACCCAAAATATTGTATTTCCAATGATGCTCAGCTCAGGAGTGAC AACTTTACTACACATTCTTTTTTGTTGGATTATGGTATTCAAGTCTGGATTAGGGTACCGAGGAGCTGCCATAGCAAATT CTATATCTTACTGGCTGAATGTTACCATACTCACACTCTATGTCAAGTTTTCTCCTTCATGTAAGAAAACTTGGAATGGA TTTTCCAAAGAGGCACTGCACAACATCCCCACATTCCTGAGGCTTGCCATTCCTTCAGCTGCTATGATTTGGTAATTTCA TTCTAGCATACTTCAATATAACCTACATATAATAGACCAATATGTACTTACTGTGTTATTACTTATTAGTTGTTATTTTT CTTAATAATACTCATTCATTTCTTAATAACATCTTAATACGGTTTCCAATTTTTACTATCATTATTATGGTGAACAGCTT GGAAGTGTGGTCTTTTGAAATGATGGTTCTCCTTTCTGGTCTTCTTTCAAATCCAAAACTGGAAACATCAGTGCTTTCTA TCTGGTTGGTTTCATTTAATATTTCGGATGCTTTTCACTTTTGTTTCATATTTTCATCAACATGTTTTCGGTGACTTGTG GGCTTTTATGCAGCTTGAATACAACAACATCTGTTGTGATGATTCCCTTTGGACTAGCTGCTGCTATAAGGTAAGAATTT CCCTTTAGCAAGCTCACCATTTTATTTAAGCCTACATCAATCAGACATTCTGTTTCTTCCTAATTTTGTTTTTTTCATTT CCCCCCTTGATTTGGTTTACATTAATGCTTTGCATGATATTCATGCAGCATCCGGGTCTCGAATGAACTTGGAGCTGGTC ATACACGTGCTGCACGTTTAGCAGTGCGTGTTGTCTCAGTCCTAGCCATTTTCGAGGGTATCATAGTTGCGACTGTGTTG ATACTAATACGTAATATCTGGGGCTATGCATATAGTAATGAAGTAGAAGTGGTAAAATATGTAGCAACTATGATGCCAAT TCTTGCAACTTCCCACTTTTTGGATGCACTCCAGAGCGTTCTTTCAGGTTCTCTATTCCTATTTCCCTTCAATTTCATTT ATTGTCTGCATTGGAGCTATGAAGTAGATGATTTAATACTGCAATCTGAATGGTGTTTGAATTTGATATCTTATTCAACT ATTACAAGTGATCTTATTTCTTCACTATGTCAACTATAATACAGGAACAGCTAGAGGATGTGGTTTGCAGAAAATTGGCG CATTTGTGAATCTGGGGTCATACTATTTAGTTGGAATTCCATCATCTATTGTGTTAGCTTTTGTATTGCATCTTGGTGGC AAGGTAATAAAATAGTTTACTCATTTGTAGCATAGCTTGAGAGTTTGAGATTAATGGTCAGTTTTACAAAGATTCCGATA AATATTTTATGTAGGGGTTGTGGCTTGGGATCATATGTGCACTCATTGTTCAACTACTTTCTCTAGTGATCATTACTATA CGTACTGATTGGGAGAAACAGGTGAATCCTTACAATTTTTTCTCTGCAATCTCTTTCATCACATCCTTCATTTTTGTAAT GCAGGTACTGACATGTCTTACTTTTCTGACTCCTCATACAGGCAAAGAAGGCCACTGATAGAATCTATGACTCAATAACA CCAGAGCTCTTAACTTCATGAAGTTTCAATATCTCTGCTGCAGATACACACATTCTGCATAAATTGTATTCTATTTGGAT GAAGTGCAGTGCTACTAGCACCCTTTCACTCTATATGGGTCACACTCCAAATTTGTTGGGACCTATATGAATTTTAACCA ATAATAGAGGAAGTGTTTAAAATAGAGTGTAACTATGAGTGTTGGTAGCATTTTTCGGGGCAAAGCAATGAGTTCTTACA CTT
CDS sequence (LotjaGi2g1v0200400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAGGGCAACAGAAAGAACAGAAGTTCTTGAAGAAGTGAAGAAACAGTTATGGCTAGCAGGACCTTTAATAGCTGT GGGCCTCCTAAATTATTTCCTAAATGTTATATCTGTCATGTTTGTTGGACATCTCAGTGAGTTGGATCTCTCAGGTGCTT CCATGGCCACTTCTTTTGCATCAGTGACAGGTTTCACTTTATTGACAGGAATGGCAAGTGCCTTGGACACCTTATGTGGC CAGTCATATGGAGCAAAGCAGTATCAGAATTTAGGCATATACATGCAGAGGGCCATGGTCGTTCTTACAGTTGTAAGCAT TCCAGTAGCAGTTATTTGGGCAAATACAAGATTCATTCTTGTTTTCCTTGGCCAAGATCCTGAGATATCTGCAGCAGCTG GGGAATATGCTAAGTTAATGGTTCCAAGCCTTTTTGGTTATGGTCTTTTGCAGTGCCTAAATAGATTCTTACAAACCCAA AATATTGTATTTCCAATGATGCTCAGCTCAGGAGTGACAACTTTACTACACATTCTTTTTTGTTGGATTATGGTATTCAA GTCTGGATTAGGGTACCGAGGAGCTGCCATAGCAAATTCTATATCTTACTGGCTGAATGTTACCATACTCACACTCTATG TCAAGTTTTCTCCTTCATGTAAGAAAACTTGGAATGGATTTTCCAAAGAGGCACTGCACAACATCCCCACATTCCTGAGG CTTGCCATTCCTTCAGCTGCTATGATTTGCTTGGAAGTGTGGTCTTTTGAAATGATGGTTCTCCTTTCTGGTCTTCTTTC AAATCCAAAACTGGAAACATCAGTGCTTTCTATCTGCTTGAATACAACAACATCTGTTGTGATGATTCCCTTTGGACTAG CTGCTGCTATAAGCATCCGGGTCTCGAATGAACTTGGAGCTGGTCATACACGTGCTGCACGTTTAGCAGTGCGTGTTGTC TCAGTCCTAGCCATTTTCGAGGGTATCATAGTTGCGACTGTGTTGATACTAATACGTAATATCTGGGGCTATGCATATAG TAATGAAGTAGAAGTGGTAAAATATGTAGCAACTATGATGCCAATTCTTGCAACTTCCCACTTTTTGGATGCACTCCAGA GCGTTCTTTCAGGAACAGCTAGAGGATGTGGTTTGCAGAAAATTGGCGCATTTGTGAATCTGGGGTCATACTATTTAGTT GGAATTCCATCATCTATTGTGTTAGCTTTTGTATTGCATCTTGGTGGCAAGGGGTTGTGGCTTGGGATCATATGTGCACT CATTGTTCAACTACTTTCTCTAGTGATCATTACTATACGTACTGATTGGGAGAAACAGGCAAAGAAGGCCACTGATAGAA TCTATGACTCAATAACACCAGAGCTCTTAACTTCATGA
Protein sequence (LotjaGi2g1v0200400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRATERTEVLEEVKKQLWLAGPLIAVGLLNYFLNVISVMFVGHLSELDLSGASMATSFASVTGFTLLTGMASALDTLCG QSYGAKQYQNLGIYMQRAMVVLTVVSIPVAVIWANTRFILVFLGQDPEISAAAGEYAKLMVPSLFGYGLLQCLNRFLQTQ NIVFPMMLSSGVTTLLHILFCWIMVFKSGLGYRGAAIANSISYWLNVTILTLYVKFSPSCKKTWNGFSKEALHNIPTFLR LAIPSAAMICLEVWSFEMMVLLSGLLSNPKLETSVLSICLNTTTSVVMIPFGLAAAISIRVSNELGAGHTRAARLAVRVV SVLAIFEGIIVATVLILIRNIWGYAYSNEVEVVKYVATMMPILATSHFLDALQSVLSGTARGCGLQKIGAFVNLGSYYLV GIPSSIVLAFVLHLGGKGLWLGIICALIVQLLSLVIITIRTDWEKQAKKATDRIYDSITPELLTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 5 | 450 | 446 | 3.1E-222 | – | |
| PANTHER | 5 | 450 | 446 | 3.1E-222 | – | |
| CDD | 13 | 449 | 437 | 0.0 | – | |
| Phobius | 20 | 43 | 24 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Pfam | 23 | 183 | 161 | 8.8E-38 | ||
| TIGRFAM | 23 | 420 | 398 | 2.2E-96 | ||
| Phobius | 44 | 54 | 11 | - | – | |
| Phobius | 55 | 78 | 24 | - | – | |
| TMHMM | 57 | 79 | 23 | - | – | |
| Phobius | 79 | 98 | 20 | - | – | |
| Phobius | 99 | 123 | 25 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 124 | 128 | 5 | - | – | |
| Phobius | 129 | 150 | 22 | - | – | |
| TMHMM | 131 | 150 | 20 | - | – | |
| Phobius | 151 | 161 | 11 | - | – | |
| TMHMM | 162 | 184 | 23 | - | – | |
| Phobius | 162 | 185 | 24 | - | – | |
| Phobius | 186 | 196 | 11 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| Phobius | 197 | 216 | 20 | - | – | |
| Phobius | 217 | 236 | 20 | - | – | |
| TMHMM | 237 | 256 | 20 | - | – | |
| Phobius | 237 | 255 | 19 | - | – | |
| Pfam | 244 | 405 | 162 | 4.1E-27 | ||
| Phobius | 256 | 274 | 19 | - | – | |
| Phobius | 275 | 299 | 25 | - | – | |
| TMHMM | 276 | 298 | 23 | - | – | |
| Phobius | 300 | 318 | 19 | - | – | |
| Phobius | 319 | 342 | 24 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| Phobius | 343 | 353 | 11 | - | – | |
| Phobius | 354 | 376 | 23 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 377 | 387 | 11 | - | – | |
| Phobius | 388 | 412 | 25 | - | – | |
| TMHMM | 391 | 413 | 23 | - | – | |
| Phobius | 413 | 417 | 5 | - | – | |
| TMHMM | 418 | 440 | 23 | - | – | |
| Phobius | 418 | 439 | 22 | - | – | |
| Phobius | 440 | 465 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0200400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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