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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0200500 |
| Transcript ID | LotjaGi2g1v0200500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT5G52450.1 MATE efflux family protein; Swiss-Prot: sp|Q9FHB6|DTX16_ARATH Protein DETOXIFICATION 16; TrEMBL-Plants: tr|A0A0S3TCM5|A0A0S3TCM5_PHAAN Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0200500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:63805507..63811998) extracted from Lotus japonicus Gifu genome v1.2.
TGGAGATAAAGTTAGGAAAACATAATTAGCACTTTTTATTTTATAAATTTAGGATATTTTTTCTTTTATAAATTTTTATT TTCAACTTCTGAAAATCAAGCATGGAAGACTTTGATCTTAGCAAAACTGAGTTGTTAGCCGTAATTATCTTCCATTTTCT GTTCTTTCACTTTCCAGTTTCCACAGCATTTTCAGAGCAACGAGATTAAGTGGTGGAGGGTAAATGGATGATACTATCAA TTTCGTGGTCTCTTCTTTTACTGTAAGTTACTCTAGTCATGTAATGGTGAACTTACATCTCATTGCAAATTGTTTGAACT TCATTTTTCTGAGCAGCTTGCAGGAAGGGGTTCCCGGTGGTTGGTGGAGATGAGTACTGTGACAGAATCAAAGTGACTGT GCCCACTGATCAAGTCTCCGAATGGTATAGAGGTTACTTTGTGATATTAATTAAGAGCTCGTTTGGATACGGACTAAAGA ATACTTATCAGAACTTATCTACTTGAATAAGCACTTGATAAGCTCCAATAAGTTCTCGTTAGTCCGCATCCAAACAGGCT CTTAAAAATATAAACCTAACTCATTATGAGTTATAACTAGTAATTTTAGTGCTCCACTGGTGCACCCTTCCTTACAAGAA CACCATAACCTTTGCCTATTCTATCTTAAAGTATTTTAAGATGATAGGAGTATGCAGCTCCGGCTCAAGAATTCTTAGAA AAAACAAAAGAAATTCAATTTCCAGATCTTTCAAGAAATCGAGAAGTTGACTAGACATTTTTATATGGAAAATGTTGGGT TTTCAAAGCAGTGCTATTGGAGAGGAAGGAGGTAATTGCTTCAACTTCAAGTCTTCAACTAAACAGTGTTTGTGTATGTG TGATAGAGTAGCCAGTAGCCACAATGGCATTGCTGATCTGAAATCGGATACCCCTTAACACCAACAATAAATTAATTGTC TAAAGTTTTAGGGGCCTTTTGTATGGGCCTCTAAAGAGTAAACTAATCAGTAACTTCTGTTGTAATTTGCAGATAGGGCT GCTTATCTAAATTAGTATAATGCTGGTAATTTAGAGAGTAGTTTGTAATACAAAATGTTTGCATCACTGTCAGAGTTTAT GGCCTGTTAGTTTCAAACTTTAATGACTCATTACAAACTTCTCACAAATTACTTTACAAGTTACAAATGAGTGTTGCTGG ACACAAGGCCTGTCTGAAAATATGTTTTTTATACTTGTGCAACTGTCGTGATGTTATTTTAAATGATGTGATTCTATTAA ATTATCACTCACGTGCCGTATCCTTAATTATATTTGAACAATTGACTTACTAATTCTGAGTCCTGAGTCCTGATTATGAA TATAATAACCAAATTTAACTTAACATGATAGGTAATTAATTTGTTATATTAACCTTTTCCTATTCTATCTGAAATATTTT AAGATGACAGGAGCCTTAGTGTGATTCAGCACATGCTCCTGTTCTGGCTAGAGAATTCAAAAACAAAAAAAAAAAATTAC ATTCCAGATCTTCAGCTCAACAATTCCAACAAAAATTTACATTTCAGTTTTTCCAAGATATCGAGAAGTTGACTTACATT TTTATATATCGAAAATGCTGGGTTTTCAAAGCAGTGCTGTCGGAGAGGAAGGTTGGCAAATGGCAATAACTTCAACTAAA CAGTGTTGATCTCTGTGTGAGAGGGAATAGCCACAATGGCCATATGGAGATAGTAAATTTCACAAGAAACAAAGAAGCAG GTCCAATGGCGTTTGTGTGTGTTTCGGTGCAGCTAACAAATATAATATCTCTCATTTTTGTTGGCCATTCGGATGAGCTT CTTTGGCTACTTCATTTGTGAATGTCATTGGTTAGTTTACGTTGTTTTCGTGTGTTGACATTTGAAGTTTAATTACACGA CCTTCTTTTGTTTTGATACTATTTGGTTGCTTATAGGTATCACTCATTTAAATAGTTATATATGTGCAGAAAGCCATTGT GGTTATCATGTTTCTCAGTTGTCACTAATAAAATTGTGTCAATACTCAATCTTTATCAGTCACTCTTTTGTTTTTGTCAT TATTTTGGAAGTTATAGCCTTTTTGCCAACGATCTTCTTGGATGCACAATTAAAATTCCTACAAACCCAGAACATTGCCT TTTTCCTATGCTTCTAGCTTCTGGCTTTTCTAGCAAATTACCTACACAATCATTGCTGAGATACTCTTAAACGGATATTC AAGGAAAAAGACAGACTCTCAAGTCCCAACATCTACTTTTAAAAATTTATATCAGTCTTTTGGTTTCAAAAACTGCAATA TAAAATCTCTCCTTTTCCCACGTAAAACTCCCACCATCAATTAAAAACTCATTCAAAGAGGTAAAATCAACATTCATTAA CACCTATTTTTTTCCATTCATAGGCCTTGAAGTTGAGAGTTTGATCAAGCAAAACAAACTCTGAGAAAACTGTCTCTCCT TTTGCAACTAAGAAGCAGGTAGTACGAAGAGAAATGGAGAGTGAACACCAAAAGGCATCTCTCCACTCTCCTTTGATTCA AAGCTCAAGGGCAACAACAGAAAGAAGAGAAGTTCTTGAAGAAGTTAAGAAGCAGTTATGGCTAGCAGGACCTTTAATAT GTGTGAGTCTCCTAAATTATAGCCTAAATATCATATCCGTCATGTTTGTTGGACATCTCGGTGAGTTGGCTCTCTCTGGT GCTTCCATGGCCACTTCTTTTGCATCTGTCACAGGTTTCAGTTTCTTGGTGAGTTCAGATTTCCTTAATCACCCCTTCAA GATTCATATCTAAGTACTCTTGCAACCAATATGATTATACTACCTCATTTCCTAATCTTGTGTTGTTTTTAAGGTTATGC ACAGTTTAATTTGACTAAACACCATTATTTAAAATTGAGTAACATTAAAGAGAGACAATGGTAGTAATGGGTGAGAATTA AGAGTTTTGAAAAGTAAAAAAAGTGGAAAATTAAATCAACTAAAGATTGAACTTGGTCACAGTTATTTTCCTCTGCCCCT TTTTAATTTGGTTAAAACAGGTAGGAATGGCAAGCGCCTTGGACACCTTATGTGGCCAGTCATATGGAGCAAAGCAGTAT CAAATTTTAGGCATACACATGCAGAGGGCCATGTTCATTCTTATGATTGTAAGCATTCCACTTGCAGTTATTTGGGCAAA CACAAGATCCATTCTTGTTTTCCTTGGCCAAGATCCTGAAATATCTACAGCAGCTGGGGAGTATGCCAAGTTAATGGTAC CAAGTCTTTTTGGTTATGGTCTTCTGCAGTGCCTCAACAGGTTCTTGCAAACCCAAAATATTGTATTTCCAATGATGCTC ATCTCAGGAGTGACTACGTCACTACACTTTTTAATATGTTGGATTATGGTATTCAAGTCTGGACTAGGGTACAGAGGGGC TGCTGTAGCAAATTCTATCTCTTATTGGGTAAATGTTTTCATACTCTCACTTTATGTCAAGTTTTCTCCCTCGTGTAAAA AAACATGGACCGGCTTTTCCAGAAAGGCACTGCACAGCCTCCCCACTTTCTTGAGGCTTGCCATTCCTTCAGCTGCTATG ATTTGGTAATTCCTTTGTAACATACTTCAATAGCACCTATAACAGACCAATATCTTCTCTTCTGTTTTATGAGTTGTTAC TATTTTTAACATTACTATAATCCTAATTCTGTTTTCAATTTTTGTTATTATTAATATTATGGTGAACAGCTTGGAAATGT GGTCGTTTGAAATGATGGTTCTCCTTTCCGGTATTCTTCCAAATCCAAAGTTGGAAACATCAGTGCTTTCTATCTGGTCG GTTTCATATTTCAGATGTTTTTCACATTTGTTTCATATTTTCATCTACATATTAATTGTGGGTGACTTGTGTGCTTTTGT CAGCTTGAATACAGCATCAACTGTTTGGATGATTCCTTTTGGACTCAGTGGATCTGTAAGGTAAGGATTTCCCTGAACTT ATAAGTTATATCTATCAAACATTCAGTTTCTTCCTAATTTTCTTTGTTGAAACTAGAAGTAAAACATGGTAAGTTGAAGA TAAAATCTATAGAATATAATTGAGGGTGTTGTTACATGTCCAAAAGTTGTAACGTATTTTTGGACTACATTTTTTTTTTG CAATTTCCCCCTTGATTTGGTGTAAACAATATCATTAATGCTTTGCATGAAATTCTTGCAGCATTCGGGTCTCAAATGAA CTTGGAGCTGGTCATCCACGTGCTGCACGTTTAGCAGTGTCTGTTGTCTCAGTCCTAGCCATTGTTGAGGGTAGCTTAGT TGCGACAGTGTTGATACTAATACGCAATATATGGGGCTATGCATATAGTAATGAAGTTGAAGTTGTCAAATATGTGGCAA CTATGATGCCAATTCTTGCAATTTCCCACTTTATAGATGCATTCCAGAGCGTTCTTTCAGGTTTTTCCTATTTCTCTTTT ATTACATTTATTGTCTACATAGGAGCTATGATGTTTGTAGATTGGAAGAAATCATAAAAATTATATGTTACTTAATTGAT TTTCCAAAAATAAGTAAGCAAAAAATCTGAAGTGAAAAATTAGCTAGCTCCTATAATTTACAAAATATCACTTCAAAACA TTTTTAGTTGCTAGTTTACTTGGTAACTTTACCATTCACCCTGAGGCTTGAACTAAGACGAAAGAAATGTAAAAGAAGGC CTTCCTATTTAAAGAATAAATATGACAAACGGGGAAGTGGAAAGTGCAAATAAGAATTTAAAAAGTAACACAGATAAGTT GAAAGCATATTTCATCCAAACAATTACAATTGATCTTATTTCTTACTATGTCAACTATAATGCAGGAACTGCTAGAGGAT GTGGTTGGCAGACAATTGGAGCATTTGTCAATCTGGGGTCATATTATTTAGTTGGAATTCCATCAGCTATTGTGTTAGCT TTTGTATTGCATCTTGGCGGCAAGGTAAAAATTGGACCATTATTTTGTAGCATAGTTTTGAGGCTGATGATTCAGTTTTA CAAAGATTACAATAATCTGATTTGGTCCTACCTGCTAAATAATTTTTTATGTAGGGTTTGTGGCTGGGGATCGTATGTGC ACTCACTGTTCAACTAGTTTCTCTAATGATCATTACTACACGTACTGATTGGGAGCAAGAGGTGATGGCTTACATTTTTT TTTCCTTTGTGATCTCTTCAATCATCCTTTCATTTTTTGTGATGAGGGAGCTGACATTTCTTATTTTTCTGACTCCTCAT CTAGGCAAAGAAGGCCACAGATAGAGTCTACGACTCAATAATTCCAGAGACCACAGTCTCATGAAGCTGCAATATCTCTG CAGATACGCATTCTGAATAAAGTCTATTTGGACGAAAGCAATGAGTTTTGTTTAAGTCTTTGAGGTAGAAAGTGTAGGTC CAGTTTTACATGGTCTAAATGATAGATCTTGATAATATAGAATAGTGTACAATATATGATGTAGCTGGCCATTGGATTTG TTGGGGGACATCTCAAATTTTATCAAGGGAAAAGAAGATTTTGGTGTACTGTAAGTGTGTAAAAGTCAGTCATTATCTGA ATTGGTTTTATACTAGATACAATATTGTATGATTACACAAGTTTATTAATATTTTTAGTTGGATTAATATTTTATGACAG TGGTCTTAAAAACTCTACAACATTTATTATAATATGAATACATAAAGAACACTGTGAAAACTTAACCTTGTCTTAGAAGA GTCATCATATGAGTATAATGAAGTGTTTGTTATTAACTCTGTTGAATCAAATGTTGAAAGTACACAAAGTCCTCCGGATC CATCACTTCACCTTACAACATTGAGCACAGACAACATACTGGGCATGATATTGAGTATATTATGTTTCCTTGCACTCAAT TCTGCAACCACCAAGTTAGACTCCCCTGTCAGCAGAACACTTAAGATCTGACATAGCCAACAAAATAGATTTCCATCTGG GACTTTGACAGCATCTGAAGCATAACAAAATGCCTCTAAAATATCTGCTACGTAATAATACTCCGCTATACCTAACCCTC CTGAAAATACTTAGCAACTAACCCAAAATCTGTACAAATATTCAACCAACATTGGTGAGGGAACCACTTAGTATAGATTT CAAGCAAGCAAAAGGTTCCTTAACCCACTCATAGAAAGAAAATATAAACTCCCTTCACATTTTCTCTAATTTATTACTAA TCAATGGCTCTAATTTGTAAGAAGTCATTTTGAAAGGCACTTGCTTGTTCACAAAATAAAGTTTATTGGTATTGATTATT CTATATCAACCTGTTCACCAAACTTCATATAGAATTAATCCCTTGAGGCAGCAAGAAAAACTTGAGAAATCAAATTGATC AATTTAAACATTCTCAACATCAATTCTAATTTGTTAAAAGGCACATGCTCATAAAACAAAATAATAAGTTTGTTTATCCT ATATTAACTTGT
CDS sequence (LotjaGi2g1v0200500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAGCGCCTTGGACACCTTATGTGGCCAGTCATATGGAGCAAAGCAGTATCAAATTTTAGGCATACACATGCAGAG GGCCATGTTCATTCTTATGATTGTAAGCATTCCACTTGCAGTTATTTGGGCAAACACAAGATCCATTCTTGTTTTCCTTG GCCAAGATCCTGAAATATCTACAGCAGCTGGGGAGTATGCCAAGTTAATGGTACCAAGTCTTTTTGGTTATGGTCTTCTG CAGTGCCTCAACAGGTTCTTGCAAACCCAAAATATTGTATTTCCAATGATGCTCATCTCAGGAGTGACTACGTCACTACA CTTTTTAATATGTTGGATTATGGTATTCAAGTCTGGACTAGGGTACAGAGGGGCTGCTGTAGCAAATTCTATCTCTTATT GGGTAAATGTTTTCATACTCTCACTTTATGTCAAGTTTTCTCCCTCGTGTAAAAAAACATGGACCGGCTTTTCCAGAAAG GCACTGCACAGCCTCCCCACTTTCTTGAGGCTTGCCATTCCTTCAGCTGCTATGATTTGCTTGGAAATGTGGTCGTTTGA AATGATGGTTCTCCTTTCCGGTATTCTTCCAAATCCAAAGTTGGAAACATCAGTGCTTTCTATCTGCTTGAATACAGCAT CAACTGTTTGGATGATTCCTTTTGGACTCAGTGGATCTGTAAGCATTCGGGTCTCAAATGAACTTGGAGCTGGTCATCCA CGTGCTGCACGTTTAGCAGTGTCTGTTGTCTCAGTCCTAGCCATTGTTGAGGGTAGCTTAGTTGCGACAGTGTTGATACT AATACGCAATATATGGGGCTATGCATATAGTAATGAAGTTGAAGTTGTCAAATATGTGGCAACTATGATGCCAATTCTTG CAATTTCCCACTTTATAGATGCATTCCAGAGCGTTCTTTCAGGAACTGCTAGAGGATGTGGTTGGCAGACAATTGGAGCA TTTGTCAATCTGGGGTCATATTATTTAGTTGGAATTCCATCAGCTATTGTGTTAGCTTTTGTATTGCATCTTGGCGGCAA GGGTTTGTGGCTGGGGATCGTATGTGCACTCACTGTTCAACTAGTTTCTCTAATGATCATTACTACACGTACTGATTGGG AGCAAGAGGCAAAGAAGGCCACAGATAGAGTCTACGACTCAATAATTCCAGAGACCACAGTCTCATGA
Protein sequence (LotjaGi2g1v0200500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASALDTLCGQSYGAKQYQILGIHMQRAMFILMIVSIPLAVIWANTRSILVFLGQDPEISTAAGEYAKLMVPSLFGYGLL QCLNRFLQTQNIVFPMMLISGVTTSLHFLICWIMVFKSGLGYRGAAVANSISYWVNVFILSLYVKFSPSCKKTWTGFSRK ALHSLPTFLRLAIPSAAMICLEMWSFEMMVLLSGILPNPKLETSVLSICLNTASTVWMIPFGLSGSVSIRVSNELGAGHP RAARLAVSVVSVLAIVEGSLVATVLILIRNIWGYAYSNEVEVVKYVATMMPILAISHFIDAFQSVLSGTARGCGWQTIGA FVNLGSYYLVGIPSAIVLAFVLHLGGKGLWLGIVCALTVQLVSLMIITTRTDWEQEAKKATDRVYDSIIPETTVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 350 | 350 | 8.7E-85 | ||
| Pfam | 1 | 113 | 113 | 1.7E-24 | ||
| CDD | 1 | 379 | 379 | 5.52497E-165 | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 1 | 380 | 380 | 4.0E-193 | – | |
| PANTHER | 1 | 380 | 380 | 4.0E-193 | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 28 | 46 | 19 | - | – | |
| Phobius | 47 | 65 | 19 | - | – | |
| Phobius | 66 | 83 | 18 | - | – | |
| Phobius | 84 | 91 | 8 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 92 | 115 | 24 | - | – | |
| Phobius | 116 | 126 | 11 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Phobius | 127 | 146 | 20 | - | – | |
| Phobius | 147 | 166 | 20 | - | – | |
| Phobius | 167 | 185 | 19 | - | – | |
| TMHMM | 167 | 186 | 20 | - | – | |
| Pfam | 174 | 336 | 163 | 2.3E-26 | ||
| Phobius | 186 | 204 | 19 | - | – | |
| Phobius | 205 | 224 | 20 | - | – | |
| TMHMM | 206 | 228 | 23 | - | – | |
| Phobius | 225 | 244 | 20 | - | – | |
| Phobius | 245 | 268 | 24 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 269 | 287 | 19 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 288 | 306 | 19 | - | – | |
| Phobius | 307 | 317 | 11 | - | – | |
| Phobius | 318 | 342 | 25 | - | – | |
| TMHMM | 321 | 343 | 23 | - | – | |
| Phobius | 343 | 347 | 5 | - | – | |
| Phobius | 348 | 369 | 22 | - | – | |
| TMHMM | 348 | 367 | 20 | - | – | |
| Phobius | 370 | 395 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0200500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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