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LotjaGi2g1v0206900.3

Overview

Field Value
Gene ID LotjaGi2g1v0206900
Transcript ID LotjaGi2g1v0206900.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinesin-like protein; TAIR: AT1G18410.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q0WN69|KN14P_ARATH Kinesin-like protein KIN-14P; TrEMBL-Plants: tr|V7C3L7|V7C3L7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0206900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:65046572..65048054) extracted from Lotus japonicus Gifu genome v1.2.

ATGTTTATGACCTCTGATTTCCTTAACTTGCACACACTTGGGATATTGAACCACTCTCAACCAAATGGGTTAGCAGTACC TGATGCTAGCATGCAGCCTGTGAAATCAACAGCAGATGTCATAAGGCTAATGGACATTGGTCATAAAAATAGAGCCAAGG GTGCCACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGGTCTTTCTTTTCCCCTTAAACATTCCACATTGAAAGTTTT CTAGTATGATGAAGCTCAACAAATTTGTTGCATTGCGCAGTGTGGTTTCAATTCATGTTCGTGGGTTGGACAAGAAGTCT GGTTCTTCTCTTCAAGGAAACCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGCTCTGAAGCAACTGGTGA TAGGCTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTGCTCAAAAGAGTG CTCATGTACCATACAGGAATAGCAAGCTTACTCAACTTTTGCAAACTTCTCTTGGTAAAATCATGGTTTATCATTTCTTA ATTTTACCCTACCATGATTTGCTAATATCCAAAGAAGGAAGATAAATAATTGACTTGCTTCATGAATTTTGGATTTGACT TCTATCTCCTTATATTATATGTCTAGATGAGCTTATTTCATCAAAATAAATTCTGAAGCCTAGAAGCTATTCATAAAGCT TGTTTCAAGAACTAAGTGCATGTCTGGATAGACGGTGGAAAACCAAAATGAGCCAAAATCACAATGGATAGAAGCATCTT CCCTTAGCTTTCATGGCTGTCCACGGTGATTTTGGCTTCACCATAACCCAAATATGCACTAATTCTTGCTGTAGAATTAA TTATAGAAAGATTTCCAAACATGCACTTAATTTTTTACTAGAGTCTGGATTTCATTTGAACTTGGAGCATTTCTTTGATT TTACTACACAGGTGGTAAAGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACATAAAGTCTTATTCTGAATCCATGA GTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTAGAGTTAGGAGCCGCGAAAAGTACCAAAGAGGGAAGAGACGTCAGA GAATTAATGGAGCAGGTGCTTAACTTGATTAAGTTGGTTATGTTTCAAATTTTCATCAGCTTATAAATTCATCAAATGTC TTCCACTTTATCTAGTATCAACCTCTCTTTCTTTTTACTAAGACTAATAACATCTGTGATTTCAGATTGTTTGAAATCTG ATTAGAACATTTTGTCTTTGAACTTTTTGATTCTCAATTTCATGCTAGAAAGGACAATTGTATATTGATTTGTTTGAGTT CCCTGCATGACCATGTAGGTGGCTTCTCTTAAAGACACTATTTTAACAAAGGATGAGGAGATTGAGCGGCTACAGTTACT TAAGGATCTGAAAAATGTTTATCCCAATGCCAACTCTGATTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0206900.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTATGACCTCTGATTTCCTTAACTTGCACACACTTGGGATATTGAACCACTCTCAACCAAATGGGTTAGCAGTACC TGATGCTAGCATGCAGCCTGTGAAATCAACAGCAGATGTCATAAGGCTAATGGACATTGGTCATAAAAATAGAGCCAAGG GTGCCACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGTTGGACAAGAAGTCT GGTTCTTCTCTTCAAGGAAACCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGCTCTGAAGCAACTGGTGA TAGGCTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTGCTCAAAAGAGTG CTCATGTACCATACAGGAATAGCAAGCTTACTCAACTTTTGCAAACTTCTCTTGGTGGTAAAGCAAAGACACTCATGTTA GTCCAAATTAATTCAGACATAAAGTCTTATTCTGAATCCATGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTAGA GTTAGGAGCCGCGAAAAGTACCAAAGAGGGAAGAGACGTCAGAGAATTAATGGAGCAGGTGGCTTCTCTTAAAGACACTA TTTTAACAAAGGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGATCTGAAAAATGTTTATCCCAATGCCAACTCTGAT TGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0206900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFMTSDFLNLHTLGILNHSQPNGLAVPDASMQPVKSTADVIRLMDIGHKNRAKGATAMNERSSRSHSVVSIHVRGLDKKS GSSLQGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQTSLGGKAKTLML VQINSDIKSYSESMSTLKFAERVSGVELGAAKSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKDLKNVYPNANSD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00129
1 194 194 2.1E-31
IPR001752
ProSiteProfiles
PS50067
1 186 186 63.647
IPR001752
Gene3D
G3DSA:3.40.850.10
6 229 224 5.0E-71
IPR036961
Pfam
PF00225
12 184 173 5.8E-61
IPR001752
PANTHER
PTHR24115:SF862
15 239 225 6.1E-136 –
PANTHER
PTHR24115
15 239 225 6.1E-136
IPR027640
SUPERFAMILY
SSF52540
15 224 210 2.98E-65
IPR027417
PRINTS
PR00380
56 73 18 6.4E-26
IPR001752
PRINTS
PR00380
87 105 19 6.4E-26
IPR001752
PRINTS
PR00380
136 157 22 6.4E-26
IPR001752
Coils
Coil
200 220 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0206900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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