Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0209300 |
| Transcript ID | LotjaGi2g1v0209300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carbon catabolite repressor 4-like protein; TAIR: AT1G73875.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q0WKY2|CCR4E_ARATH Carbon catabolite repressor protein 4 homolog 5; TrEMBL-Plants: tr|K7M1Z8|K7M1Z8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0209300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65610922..65619664) extracted from Lotus japonicus Gifu genome v1.2.
GTCATTCACCTGCACCTGGCCTGGTTTGCGGCAAATCGCCACCGTCTCCGTCTCCCGCAGGAACCTTGCTCCTCGTGCCG CAGCCTCCACATCGCCGTCTCCGCCGTCGTTTCACAGAGCATTGCCTTCTCCTCGATAGTGTGGGTACTTTGATTTTGCC TCTTCTCCTGAACAATCATTGCACCTAGTCCCAGTAAATTCTCAATTTCATTATGATTTTTGATCTGAGAACTGAGATCG TGTTTTCCATAGGTACCTCGTGTCATGAAGCTTTCGGAGCGAATACGTAACCGGACTCGTACCTCGCCGCAGTTACCCAG CGGCGACATAGTGCGCCGCCGTAAACGCCAAAGTCTGCCGCCACCTGGGAATTCTAGCGGTCGCCATCATCGGTCAAAGC GGATGAGACATTCTGAGTCCGATCATTCGGGCTTAAACTGCGGAGTGTTTTCTAGGAGATGGGTTTTCTCTTCCAAAGAT TGTTCTAATTGCATGGGTAAAAAAACAATTACTTCAAATTCCATTTCAATATGAAGTTGTTCTGCATTCAAATTTCATCC AAATTCCACTGTCAATTGTGTTTGTGTGCTTTGTATTATTTTTTCTAGTAAAGGGAACGAATTTTGTTATGGATGTTTTC CTGTTAAGCAAAATATTAGCAATTTAGTGTCACATTTCTGTTAGAGGTCTTCACATTATGTGGAATAAGTGAAGAATTTG ATTATGGGATGTCATTTTCCATATTGGGGGTGGGTGTCGGGAGCGAGCAGCGGCTATTTACCTACACAATGTGAAAAAGT GGGGTGTCATTGTCTTGCTTGTGGATACTGATTTGTTTCAAATCTCCATTAATTTTCACTCTGCGATTAAGATGGCCAGT GTTGTCAAATCGCGATCGCGGACCATTGCAGATTCGCAGTGAGCCAAAAATCCGCTATTTTGGCCACTATTTAGCCGTGA ATAGCGGGAATAGTGCGCTATAGTGGGCAATAGCGGCGTTGCGATTAGCCAAAAATCCACTACGCTATAGCGGGCGCCGC TATAGCCGCTATTTGATAACACTGAAGATGGCTAAATACTTTAACTCTATTTTGTGCCAGTGAAACAGTTTGCCATTTAG ACTTGATAGCGGATTGTGTTTATCTCGTATTGACTATTCTTAACCTTTTCCCTCTTATCGCAGATAAGGTTGTAGTTGTT TCATACAATATACTTGGTGTTGAGAATGCATCTAGGCATCTGGATTTGTATTCTAACATTCCACGTAGTTTCTTAGCGTG GGACAGGCGGAAAAGTCTCATACTTGAAGAAATTAATCATTATAATGCAAGCATACTGTGTTTCCAGGTAGTTTAATAAT ACTTCTCGGCTGCTTGTTATCTTGTTACAAACTTACAACCATTTTACATTTAACATATCATATATGCATCTTTATTGAGG TTTGAAGGGTAGAAAGAGAAGACTTACAAGATATTAATTTAACTAACTTATGTTTTAACTTTTAAATATAGCTACGACTC TTAATAACTTGTATTTATGCAATGAAGGGGATTATGAATCTGTGGTATTTCTCTAGTATGTTCCTTGACAATATGTTATG CTGATATTATGTCTAATATGCCAGTTAGCACAAACATCTTAATGTTACCTAATTAGTATTTATTCTCTTCTTGAAATTGT AAGTTAACATCATGTACCCTCGAATTTGGTTGTCAAGAATTGTTTTCTTATAAATCATGTGGCTGCAGGAGGTTGATCAT TTTAATGATTTGGATGGTCTTTTCCAGAACAATGGCTTTAAAGGTGTTTACAAGGTAAATTATATTCATAGTTGAAATTT CATAGAAGGTTTTGAAGTCCCAATCATTAATCAATTTCCTTACCTGGGCTATTATTATCATTCATTGCAGGCTCGCACAG GGGGAGCACGTGATGGTTGTGCTATATTTTGGAAAGACAAATTGTAGGTTTCCATACCCATAACTCATTTAGAAAATTGG GTTTTTGTATCCATTGTTAGATTGTTTTATATCTTAATACTTATCCTTTCACAATTGAGTAAATAGAGTTCCAAATTTGG CCTGATCACAGTATATTTTAAATTTAATGCAGATTTAATCTTTTGCATCAAGAAGATATAGAGTTTCAGAGATTTGGCCT GCGTAACAATGTAGCTCAACTTTGTGTTTTTGAGGTATTTAGGTTTTGTGTTTTATTTTTCTTATTCGCTTCCTACCTCT GTTCCATATTTGTTTTGTTCTGTTTATTTAGAAAGGTTTATGGTCCTTGATGAATTTTTTTACCCTAGGTCATAAATTCT GTTGTATGTAAACGTGTTTTTTTGTTGGTGCAATGAAACCAATTACTTTGGGTATTGGTTTTATGTTATTGTTACTCTTC ATTTTATTTTATTATCTATTTACAGGTAAACCGTGATAGACCAGAATCCGACACATGTGAATTAACAGCAGTGTAAGTTT TGTATGTCTAAAATGGGTAATATGAACACAATTATTTGTTGTCTTTGACATATCTTTTAATGTAACACTTAGGATAATTT TATTCAAATATCTTGGAATGCTTAATATGTTAAATTATGGCATACTAACATATTACTAGATACTATTATTTTTTTAAACC TTTATTTCATTTTCATTCTTTAGCAGCAAAGCTAGTTTAAAAGTTAATATTTTGGAAAGAATAATGTATATACTGATATA TTCACGTTCGGTCATACACACATGGTGCCTATTTCATGACCGTGGATTTTTGCAATATTTTGTGCATAGTAACCAATTCA ATCTACATCGACAGGACGCCATCTTCCGGTAAAAAAAGATTTATAGTAGGAAATATACATGTGCTGTTCAACCCAAATCG TGGCGACATCAAACTGGGCCAGGTACTTTCTGAATTTTCTAAACTAGCTACAGACAGCATACTGATTTTGTATGTGTACT GTGGTTCTTTTATTTTTATTGGGCTGGGCTCGTTGCAAGTCATTTGCATCACTCTAACAATACATTTTTGACTATATACA GTTAAGTAAGTTGTCTAATCTATTTTGTTGATTCTGGTAACTTGATACATGTCATAAATGAATAGGTCAGACTCTTACTT GATAAAGCCTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTCTTCCACAGGT AATATCGTGTTTTGTACTCAGTTGATCAATTTCAGATTAATGGTCCATTGCGCTGGTACTTCATTGTTTCTATTTTTTTT TTTTAATCTTATGTTGGCAGAGTGCAATATATAAGTTTGTGTCTTCATCCAAGGTGAGTTTGGCATCTACTCGTCATGGT ATATTCTCAAGCCATTTTAGCTTATTTTTGTGCAGTATCTGAGAGAAATTTGATTATATGGACAGTATCACAGACCTTGA GTAAGTCAGCTACCTGTGTTTGGGCTATGGATTACAGGTAATTAGGGGAACGGAAAGGGAATGAGGGAAAGGGATGCAAA ATCCCTAGTCTGAGAGTGTCAAAATAGATAGGAAGGGAAATGAATTTGAAGAAATCTATTCCCTTTCTGTTCCTCTCAAA GACTCCGTTTTTTGTTCCCCCCAAAGTTGGGCGTGGAATGGAGTAACTCAAAGGTGATGAGGTTCCATTCCTTTCCCTTA TTGATCTTTCAAACATGGGGAATGTGTATTTTGTTAAATACAAACCACCTATTACTAAGGTGTATAGGAGAAGAGTTATA GGAGTTTCAACCCCTGATTGTTAGTTGTGTCCAATGGGTCTTTGTAACAGTTAGGTAGTTAGTATATCTATAAAATGAAT AGAGCAGAGGGGTTAGTTAAGCAGTTATTGAGTTTTGCTGGAATTCAGTTAGGGAGAGTACTAATTTCTCAAATGCCAGC ATTTTTGTTGTCATTTTCAAACAATATTCAATAATCCCATTTTTCCATCTGATCCAGTTTCTATGATCTATGTTCCATCA TTCCTTTTCCTTCCCCTTCCCTTTCCATCTTACCCCACTTGTTCTGTTCCAGTCCATTAATGGAAAAATAAAATCCAATT AGAGTTAGGGGTGTGATTTTGAGTTTTCAGTATTTACTAATGAAATTACCGCTTCATTTATTGCAGCTAGACATCCAATT TCATAATCGCAAAAACATGTCAGGTCAGCTTGAAATCCAGTCCAATGATAGGATCTTCAGATCAGAGATTGGTGATGATG CTAGGTTGTTTTTGAATCTATACAATCTTTTGTTTTCAGTTATCAACTATTATGACTTCACCTCCCTGCTCCTTCCTAAA AAGACAAGGCAACTATCAATGATGAAAATGATTCAAGAGTATTTGTTTTTTCACACTTTTGATTATTTATTGGCATGAAA ATGTGATTTTTGATTGCTCTGAGTGCAAATTAAAATTAATAGAACTGCCTTTAATATTATTTCTCCTATTCTGGAGGGAA GGGTTGTAAACTTGTAATCATTGTTTTTGTCAAATGTTTGGTGCTAGGTATTCTGTGATAATTATTTGGGTATGTATCTG TTGCAGCATTTCAGTGTCGGTTTCAAGGCAATTGCTACACAAATGGAATGTAGAAGAACTAAGGCTTGCAACTGGTGCAG AAGGAGTCACTCATCTTCAGCACCATCTCAAGCTATGCAGTGCTTATAGTGGTGTTCCGGTATGATGTTTTAACCTGTCA ACTATATGATTATAATCCAACTTAAAAAAAATTGTTAGTTACCTATTTGTGTAACTTTTTTATACTTGATAAGTTTATAC TTGAAATATTGATATGGGAAATTCCTTGAACAACTTTCATTGGACATTTGTGATATTCCCCACATAATCTTGCATTAATC TCATAGTTGATTCTGCAGGGAAACCAGAGAACAAGAGATGATATTGGTGAGCCCTTGGCGACATCATACCACTCCAAGTT TATGGGAACAGTTGATTATATCTGGTAGTTATATTGTTCCATACCAACCATCAGAATTATTTGCATTTACATATTGTTCG TTACTGATGCCGGTGATATGCAGGCATTCTGAGGAACTTACTCCAGTTAGAGTTCTCGAAACCTTACCGATTGATATTCT TAGAAGAACTAGAGGACTCCCTAATGAGGTACTCTACTTAAAACCTGGTCTTATATGTAATTATGCTTATGGATTGAGTT CCATGTTGAATAATCATTATCTTTATGATTCTTTCGTGCCTTGTAGAAATGGGGAAGCGATCACCTCGCTGTTGTGTGTG AATTGGCGTTCACAAACAATGATAATTTGTCATGATTGCTTCATCAGGTAAGTCCAACCCTGTACTGAGTGTTCTCATCC TCCAGAGTTTTCTACGACATTATGTATGAGGTCCGAGCCTTAGGCTAATAACTAGTATGGAAATTGAGGAGAGTCAAAGC ATTGCCACCATGATAGATCTCATTAAATCTTACAGCTGATGTCCTTTTTCTATCCCTTTCAGGACCTCTCTTGCTCTGAT AATTCTTTTCATAGTAAAGGGCTTCATGAGACCGAACTGTGAATTTCACCTAATGATTTGAAACAAACATCATGTTGCAA CTGATCTCAAGTTCTCCTTCCTAGTTGAAATGTTTCTTGGAAGTGCTTTACAATCCATCAGGGTATTTAACCAGAGCAAA CCTGATTTTTAACCACCGGTTATCAGGTTCAAAGAACAGTTGGTCTATATCTAAAATATATACATGCTGAGAGTCAAATT GAGTCCCATTATCAATAATCCTTTGGAGCCTTTTCACCATATCTGCAACACCTTCAGGTAAGAACTTGTATTCTACAAAA ATCTTTTGAATTATTTATCAAATCAGGCAACGTTGTTTTTATTCGTGTTTTGGGGAAAGAGGAGGCTGTCTTGTTCAAGT CTACCTCACTTAGTTATACATTCCAGTTGTTGTTATCATGTAGAAGGTACAATTTTTTGCAAATATTGCTTTGAAATATT CATCACGGTGCACATTTTTTTTAGCCTAACATGTTAACCTTTGCTTGGTCTAGACTTTTTTTTGGGACAAACCAATAGTC TTACTCCCTATAATGTTTTAATGTAACTCCTTTAGATAATTTATTATTTCAGTTCAGCAGTATGCTTCGGACTGAAAATC CCGATTCGTCCAAAATCAAACACACACTCACATCTTAAACCGTTTTCGTCCGAATGGTACTTCATAGTACTCGGGTTGTG GGTTAATCCGGCGAATAGGTTGCCCGAGCGGGTTGATTCTAATCTAGCCAAAAGGGTCAGGGTCTCTTAAGCGTGTCGTT GGGTATTTCTGCCTTCCATTGTGTGGTCAGTTGTGGTTCAAGGATGTTTAAAAGGTGTCAGAGCATTAAATCTCTCACAT TTTTGTGAATATATTTGTTTAAATGTGGTTATTTTGTTTCCTTTCTTAACTTCATCTTTTTAGGTAGTTCTTATTTTCAT TTATTCCTTCCTAACGTAGGATTCTAATTTTATGATTTGGTCAATCAACTTTTGTATTTCCCTTTATAGAAGAGGAATCT GTGTACAAAGTATCTAATAATATTTCCCCTATTTTAATTTGGCACCATGGCTATTCTATGCGCCTTTTGATTTACAACCA TGGTTGATCGGTCCTCAGCCACCAACAATATTCATAATAAGAAGAGGGATATCACAATTTCCTAAGGCTCGCAACCCCCT TATTAGAAGCAGAGAGTCCTTTTGCACGATTCCCGTTATGTCCTAATCACCACTTTTCAACTCAATGGGTTTAACTATTT TCCATGGTCCCAATCTTTTCAGATGTATATCCGTGGCAGAGGAAATATTGAATACCTCATCGATTGGCGACCTAAGCCTG ACACCATTGAGGCATTAACCCACATCATGCCTAAGGGGATGTTGAAAACTCCACGGTGATGACATGTGGTGAATTCCATG TAGGAAGACACCATCAACAATTTGCTATTCCACAACCACAAAATTAAGGGAGATAGCATCCTAGAAATGTTACTCTGACC TCTGAAATAAATTCGTATTTATGAACTCCCCTTTTCCGTAGCGAGATAAGAACGTGACAAAATACTTCCACCTTGAAGTG GGTATAGCAAGACCTGGATCTCTTCAGCACTTGAAAGTGGAAGTCAGTCGAGGATGTTGAACATCATTAGCAAACAATGG AAGAAGGAAGAATAATTAAGAGTTGATCTAACTCTTTTTGAAGTGGGTATGGCAAGTATGTTGCTAGGGAAGATCAAAGT TGATCTAACTCTTTGAGACCAATGCCTTTGTTGAAGAAGCAATTGCCTTAAGAGTTCTACGAACTAGAAGAACTCCTCAA ATCTCTAGTGTGACCACTACGACAAACCATATCACACCCGAGAAAAGCAAAATCCATGGGAGACTGTCACATCTAAAGGG TAGCAAATTTGGTCCTAAAGCTCCAAGACCTTCCTTGCAGCTCGTGAGGTTGAGGAGACTCCTTTGACTTCTTAAAGAAA GGTATTAGTTGTGGTACTCATAAGTTTTTTAATTTGTTTATGTGGTACTCCTAGTGGTTCTGTGCCACAAACAAGTAAGC TCCCATATTTGCACCTCAAATATGTTTGTACCATGGATCATTCATTCTAGTGCTTCGATCATGGGACCGACTTTTCTTGT TCTAGAAAAAAAAATTAGAATTCTAAATGGTAATTTTTTTAGCTATTGTAGGAAAGTGGAGGATCACCCTATCTAAACAC ATTTGTCTAAAAAAATGTTTTACATTTACCTAAACTGTCCTATATCCTCAGTCTATCAGGTCCAGATGCAGTATGAAGTT CACGGTCAATCATTGCATTTTCAGGATCAGAGTTCAGGGAAGATGAGTCGCAGTGACAAGAGGATGGATGATCGTCTATT TTGTGTATGCTTTCGAGAATAAAGTAGATCAGTGGTATGAGTCCATTTCTTGTGGTAGACTAAACAATGCTCTTTATATA GAGGAAATCGGGGGAGTCGACAGGGTGTCGTAGATCATTAAAGCTCTTAGAGTTGGTGAATGTTTTTTTTTGTATTAGTT ATTATGTTTCCTTTCTTAGCTTTAGACATTTTCAAGCAATTCTTTACATAAATGTATTCATTCTTAACTTAGGATGTGTT TCCTGATTTTGTCAATTACTTTTTGTAATTCCCACTAAAAGAGGAACCGTGCAATCAAAATATCAAATATTTCTCCTATT TCAACCGATGGTATAAGAGTGGAGGAAATGAATGATGGTGATGGATGACACAATGTGACCTTGACAAGAGAGATATGAAG TTGTCAGTGGATAGCAATCAGTGATGCAAAGTCGGAGTTGATGTGGATGGTGGCTTCGGTTCACCATGGAGTAGGGGGTA GAGTTAAAAATAAAAAAAATGATGGAATGAGGAGGTTCTCCGTGGCTCGGGTTCACCTCGATTTGGCTTGAAATTCGACT CAAGGGTGAGCTTAGAATTGGGCTTGGGAGTTGAAAAGCTTCATTGACGCGCCTTTGCCCAGGGCGTCTCTTGCCCCGTT TTGACAAAACACTCCTCCGTAGTGACAATTGTTGGCTTGATGCTATTGTTTTTCAAAACCCTAATGGTTGAAGTGGCAAT AGGCTATGGAATGGAAGAAATTAAGATTCACATAATGATGATTGTCTTCACTGTCTCTGACTAGTCTGCCTAGACTGATA TGCCTATATGAGCCCGACTTCTT
CDS sequence (LotjaGi2g1v0209300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTTCGGAGCGAATACGTAACCGGACTCGTACCTCGCCGCAGTTACCCAGCGGCGACATAGTGCGCCGCCGTAA ACGCCAAAGTCTGCCGCCACCTGGGAATTCTAGCGGTCGCCATCATCGGTCAAAGCGGATGAGACATTCTGAGTCCGATC ATTCGGGCTTAAACTGCGGAGTGTTTTCTAGGAGATGGGTTTTCTCTTCCAAAGATTGTTCTAATTGCATGGATAAGGTT GTAGTTGTTTCATACAATATACTTGGTGTTGAGAATGCATCTAGGCATCTGGATTTGTATTCTAACATTCCACGTAGTTT CTTAGCGTGGGACAGGCGGAAAAGTCTCATACTTGAAGAAATTAATCATTATAATGCAAGCATACTGTGTTTCCAGGAGG TTGATCATTTTAATGATTTGGATGGTCTTTTCCAGAACAATGGCTTTAAAGGTGTTTACAAGGCTCGCACAGGGGGAGCA CGTGATGGTTGTGCTATATTTTGGAAAGACAAATTATTTAATCTTTTGCATCAAGAAGATATAGAGTTTCAGAGATTTGG CCTGCGTAACAATGTAGCTCAACTTTGTGTTTTTGAGGTAAACCGTGATAGACCAGAATCCGACACATGTGAATTAACAG CAGTGACGCCATCTTCCGGTAAAAAAAGATTTATAGTAGGAAATATACATGTGCTGTTCAACCCAAATCGTGGCGACATC AAACTGGGCCAGGTCAGACTCTTACTTGATAAAGCCTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGC TGGGGATTTAAATAGTCTTCCACAGAGTGCAATATATAAGTTTGTGTCTTCATCCAAGCTAGACATCCAATTTCATAATC GCAAAAACATGTCAGGTCAGCTTGAAATCCAGTCCAATGATAGGATCTTCAGATCAGAGATTGGTGATGATGCTAGCATT TCAGTGTCGGTTTCAAGGCAATTGCTACACAAATGGAATGTAGAAGAACTAAGGCTTGCAACTGGTGCAGAAGGAGTCAC TCATCTTCAGCACCATCTCAAGCTATGCAGTGCTTATAGTGGTGTTCCGGGAAACCAGAGAACAAGAGATGATATTGGTG AGCCCTTGGCGACATCATACCACTCCAAGTTTATGGGAACAGTTGATTATATCTGGCATTCTGAGGAACTTACTCCAGTT AGAGTTCTCGAAACCTTACCGATTGATATTCTTAGAAGAACTAGAGGACTCCCTAATGAGAAATGGGGAAGCGATCACCT CGCTGTTGTGTGTGAATTGGCGTTCACAAACAATGATAATTTGTCATGA
Protein sequence (LotjaGi2g1v0209300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSERIRNRTRTSPQLPSGDIVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCMDKV VVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDLDGLFQNNGFKGVYKARTGGA RDGCAIFWKDKLFNLLHQEDIEFQRFGLRNNVAQLCVFEVNRDRPESDTCELTAVTPSSGKKRFIVGNIHVLFNPNRGDI KLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSLPQSAIYKFVSSSKLDIQFHNRKNMSGQLEIQSNDRIFRSEIGDDASI SVSVSRQLLHKWNVEELRLATGAEGVTHLQHHLKLCSAYSGVPGNQRTRDDIGEPLATSYHSKFMGTVDYIWHSEELTPV RVLETLPIDILRRTRGLPNEKWGSDHLAVVCELAFTNNDNLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 54 | 54 | - | – | |
| PANTHER | 35 | 438 | 404 | 1.0E-211 | – | |
| PANTHER | 35 | 438 | 404 | 1.0E-211 | – | |
| SUPERFAMILY | 80 | 434 | 355 | 1.96E-35 | ||
| Pfam | 83 | 426 | 344 | 2.4E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0209300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…