Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0211500 |
| Transcript ID | LotjaGi2g1v0211500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|I1KIU8|I1KIU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0211500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65897501..65907126) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGCTCCGCAAGGTGGATCCGGATCCGGACCCGACCGGGACAAACCCAACGCTCCGATCCCCGTCGTCTCCGCCTT CTGGAAAGGTATTCAGCTGAATCTTCATCCACACGCTTTGCTTTTCTATCAATTTTTAGGGATTTGAGTTGATGATCGAT AATCTATGACTGTAACGTGTTGCCACGGTGTTTGAATTGAGAATCGATTTTTTTTTTGTAGAATTTGATTTGGAGAAGGA GAAGTCGATTTTGGATGAACAAGGGCTTCGGATTGCAGAGAACCAGGAAAACAGTCAGAAAAATAGGCGCAAGCTTGCTG AGAACACTAGAGGTATGCATGCTTAGTGTTTTTGCTCCTGTTTTGTCCCGAAATCCAAATTGTGCTAGAGAAACATACAC TTAAATGTTAAGCATTGTACCAATCAAGAGTTTGATTAGGTGCTGGATACATTTAATAGAATTTTAAATAATTTTTATGA AATCAAAACTTATTAAACAATTTGTATTGGATACCATACAAGGGTACCATGGTCACTAAAGTTCGAATTACAGGAGGAGC ATAGCTTCACTCTTCTAGTCTTCTATTTCCATAAACTTTTTTGTTAGAAGTCCCGCATTGGCTAAAGATATGACATAGAT AGCTTTTATAAATGGTAGAGCAACCCGCAACTGTTGAGCTAGCTTTTGGGTTGAGTTAGGTCTCCCAAATTTGTGAATTC AGTTTTCGTGGTTTTCTGCTTTGTTGTTACTGAATGACTGTCTAAGAAATCACAAATTGTGCTGCTTACAGGCTTCAAGA AAGCTTCACCTGAGGAGAAGTTAGGCTTGTTTAATAGCTTGCTTAAGGGCTACCAGGAAGAGGTTGACAATCTTACTAAG AGAGCGAAGTTTGGAGAAAATGCTTTTCTCAACATCTATCAGAAGCTTTATGAAGCTCCGGATCCTTATCCAGCGCTTTC ATCGATTGCTGTGAGTTCTAGTATTTCATGTGGGTGCTCCATGCTTTTGTTTGTACAGGATAGAACTCTTGCAATATTGT TGGATGTATTACATTTAGGTGCATGAGGTGGTTACAAATGTTGGGTTATGGAATCTAAATCTATAGATATAATGATGCTT TTGTTATCAATGATAACTAGGTGTGTCCTTCCACCTCAAAATGCATGCATCTTTAAGGATGTTTCCTTCCTTGCTATTAA ATCTACTCTGGAACACGTTGTTACTATCTCTTTGGAACAATCTATTGCTTTTAGGGTACTTTCATCTCTTGACTTTCAGG GAGATTGGAAGCTCTGCTGCCTTCTCACTATGCATATTTAGACTTAACCACTTAGGCCTCCAACATCAACAGATCAACTT ATTATATTTCTAAGAATTTCCATCTTCCCGCTTTTTATTTGTACGTGGAATTTCTTGTATGCATTGACATTAATTGTGCA TGCATGCAAAGCTATGCACATATCTGCAATACTGCATGCTTGTTCATGTTCTGATATATTTTCTTTGGAAACAGGAGCAA GATCTCAAGTTATCTGAGATTGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAAGAATTCAGGACAGAGGCAACTCA CTTGAAGAATCAGCAGGCAACAATACGTAGACTTGAAGAGAGAAATAGGCAATTAGAGCAACAGGTTATTAATTCTTGAG ATATTGTGTCTATATTGCATAATGTCATAGACATGGTCTCTTTCATTTCTGAAGGCAAATACGTGTTGCCTTAATCGTTA CTTCCCATATTTGGTTTGGTATGCATTATGCATGAATGTATTGTCAGGATCATAGAATGAGTACCTATTTTCATGATCAT GATGGACTAACTCTCCCAATGTTTAACCTTTTAGATCAAAACACATGAATGGTTTTTAACATATCATATCTAACACTAGT AGCCATTATTGTAATTTCCAATCCAATTTAATTTCATAACAATTTAAGATTGAACAAAATTTAGGTGTAATTGAAAATAT AGCATAAACTAATTTTATCTAATATTTTTTTACTATAACTAACTTCAAATCTATTTTTGGCATTACATACTATCTTGTAC TTGCAAAAGGGGCGAAATCTGACTTACTGGGATGCTGATATTGCACTCTAGTTTCAGTCTCAGGAGTTGGTACTTTTTGA ATGAATTCACAAGCATTTGCACTTTCATGCTATGCATATATTTATACAATTTGGTGACCTTACACACACACACACACACC CACATACGCAATCAACTGCAACAAAAAAATTCATTTGTTATACGGAACTTTGTTAGTTGTGATGACCACCCTCAGACATC AATAAATGTTGGCAGAAAGGTTTTTAATGTTTACACTCATGGCCTGTAATAAATTACTTTCCTAGGTTAACTGAATTCCA ACTCTCTACTATCATTTTGATAAAGTAATAATAATTCTTTTCGATCAGAGTACTGGTATTTTGTTGTCATATGATAGTAT GATAATATTCAATGTGACTAGACTTCTCAACATTTCTAACATTTTAAAACTTCAATTACAAATCAAACCTAACTATCTTT CACGGGTTTCATTAATTTGAATAAACTTATCCATGTCAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGATTAAGCAACG CAGTCTGGCAGAAGAGAACCAGAAAACATTGGAAATTTTGAAAGAAAGGTATCTTCTACTAATCTTGTGTGCTATTGCAT TTTTTTATTCAGTTTAGTATATGAGACAACTGCATTAGGGTATCTGTTTGTGTTAGCACTCCTACTATTGTCCAGGTGGA TTATACAAAGAAGGGAGGATAACCATGGGCCACATGAACCGAATGAATAATTTGGCTCCAGGGAACTACCTGCACACATA ACAGGGTAGTTAGAATAAACAAACAATCAGGACATGTAATATTAGAAGGGAAGGCAGGGAGAGGGAGGGGGCAAGCAAGG ACTGGGTGTGGGATTGGATGGGACATTACAGGTCTCTCAGATGACCTGTGTCATATTTTCTGTTTTTAATTCTTTTGGTT AGCTTTATGTTTGTTGTGAGTGAGGGAAAATATATGCTTGTGAATCTGTTTTTATACTTGGGAATTATTCCCTCTTCTCT ATACAGTCAAATATCTAGGTTCCTAACAGTTGGCCCCTCTTGCTCTGGAATTAGACTGTTCACTACTATTCTATTGGAAC TGTCCTCCGCCTTGTCATTGCTTCCTAAACTGTTGATCTGTTTATTCTATGCAGAGAACAAGTACTGCAAGATCAGTTGC AGAATGCCAAAGAAAGTGTTTCCAATATGCAGAAATTGCATGAGCTTGCACAAAACCAGCTGTTTGAACTCCGTGCCCAA TCTGGTAATCAATTAATTCCCATTTCAATATTAGTCATACACTCTTCACCTGAATCTGCAACATCAGCTATTACATTACT GTATAATCTATTCTTTGGCACTGTGCTTTCTTTCTGTATATAAAACCATAATTCTTTAATATTATTATGTCATGAAGAGA ATAACCCCTTGTTTTCTTGAAATTTTCAGATGAAGATAGGGCAGCTAAGCAATCAGAGGTCACTCTTCTGATGGATGAAG TTGAACGAGCTCAAACAATGCTTCTTAGTTTGGAAAGACAGAAGGTGCCATTTACAAGCTTTTATTTGATTTTAAAGTTT TAGTTTTTTATAATTGAGTCTTATGTGCTTTATATTCAAATTCTTCAAATTATGGTTCTTTCTCTCTAATTGTTTCATAA GTTATGAACTGCTGCAATCCACTATTTCTAGATCCATTCAAGTGTAGTGAAGATGATAATGTTAAGGTGGATGATTGGAC ATCGAAGAAAGATGAGATTAGAAATGAATATAATTTGGAGTAGAAGATGATAGGAACTTGACTTTGGTGGTTTGGTCATT TAAGAGTTGATCAAAATGGAAGGTAGTTTGATTAAAAAGGGTAGAAAACACCAAAGAAAAGATTGAGAGAAGTGATTGGT TGGCTAATGTTTTTACCAAGTCTTTGAGAGGTCATCGGGTTAATTAGATTTGTCATATTTGGTGCATATGACATATATGC TCCAGCTTGAGGGGAAGTGTTAGATATCTTGTAAATAGGTAGGATATAATGTATTAACTGTAATTAGGTAACATTATCAT TGTAAATAGGGAAAGAATGCTTATATGTATTTATTGTAACTATTATATATAATGAGCTCCGTTGTGCAGTTGAGACACAT AGATTCACTCCAATGCCTCTTGTATTCTTCTCATTTCACAGTTAATTCCCCCTTTTAAAAAAAAACATTGCTGCAATCAG TATGTACATAATAAATACAAAATGGGGAATCCTCCTGTATCAAACTTAAGAGAAGAAGCGGCAATTTTTTTCAAATTGAA ATTATCTAAAATTTGCAAGAAAAATATTTCCAAAAGAAACAAAGTATTGGTTGCTAGGTAGATGTTGTCTTAAACTCTAG AACCCTCTTAAGTCTTAACCATCACTTCTGTAATTACTTGTGTTTGAGTAGTCAACTATATATAAACTCATGTTTACCTC TCCTCTTGAGATATGGCTTGGATGTTCTTGTTGTATAAGTTTTGTAAGTATGTTTCCATTCTCTTGTTAAATTTTCTTAA TTGGTGTTATACATTTCCCTTTTCGACTTTAAGTTTCTATCGATGACCTCGCCCTCCATACATTCTGGTCCAGTCTCATT GACCATGGACTTTCAGCTGTAGGCATGAAGAATAGGATTACAAGATTGTATTACCTACAAAGGCTGTTGTCAATGATTAT AAGTTGAATATAATGTGTGGTTGTCATACAGTTTGGAATGAGCTATGTATTGGTCTAGGTATTTCTTTGGTCTTTATGAT AAAAGGATACAGTTTTTCAGTTCATAACCTTCTCTTACTCTAAGCCTCTGTTTGGGTTGCAAACTTTGGGTGGATAGTAA AGGAAGAGGAGGGAACTAAAAGATTTGTCCCTTGCTTGGTACCAAAGGGTACAGAGGACTAGAGTTGGATGAAGATAATT TCTGCGGGCTCCGCATAATTTACATCCGGCCCTTTCTGAAAAAGTTAGTAGAATTCAGCCAGACTTACTGTTTGTTCTCA CGATCCTTCTGTGTCTATGCAGGGGATGCTCCAGTCACAGTTACACACGGCAAATGAAGATACTGAGATCAAGAAGAGGT ATGGTAATACTCATCTTTTTTCTTTTTTGGAGATATATATAGCAAAGTTAGCCGTAATAGGAGTACAGATATACACATAT TTCCATTTCTAAAATGAATATGATCTACGTTTTAACTTCCAAATTATAGATAACATTGTGGTGGTTGTTAAAATAGACCT ATTTATTGTTACCAGACTATCCATCTTTAGCATCCTTTTTAATTTGAATAAAATTTCTGTTCTATATTACCTTTTGGTCT TGGTACTTCTAAACATTATAATTAAAGCATCTCATTTCAATTTTTTTAAAGATTAGCAGCTGAAATTTCTTCCTTATTGA AACAAATTAATTTTCATAAAATTTGTGTTGGACCTAACTCTACCCCAAAGATGCATATTACTTGAAGAGATTATCACAAT TCTCCATATATGCTAAGAAACACACCGGAAGCTGTTAAATATACAAGGATGTTTCCATTATTCTTATTGATTTAATCCAG CAACTTTAGCTTTATGTGTTATTACTTCAATTTTTTAATTTTTTTTGTACAAGTGTAAAAGCTAGTAAAACTGTAAAACA ACCCCTTTCTTTATAAATTTCTGAGCGAGTGTCTGAACATGACCTGGACCCTATTCTTCACCTTTGGATTATCTATTTCT GTTAATAGAACTGATTATTTGGATCCCTCAAACCATAAAGTATTGTCAGCTAAGCAATTCATAAGCAGTCTCCAAAAAAT CAAAACGATATTCTCTTAGATGAACTCATCGTACAGAAAGTTATTCAGTGGTGCAGAGCTACTTGACTTGTTTTCATTTT CTGTCTGTCTGCCTCTCTTTCTATATATGCGTACTCACTTATCAATACTTCTCAAATCCTTCTTATTTCCTTCACTGTTT TAATTTTCTTTTAAATTAGACCATAGTTGTCTGATGACTGTTGATTTTTATTTTGCAGTGATAATTTAGACACGAATAGT GTGCTTGAGAATTCTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAGCCTT ATCAAATGAAAGAGAAGAACACATAAATGAAGTCAAGAAACTTACTGCAATGCTCAATGAAAAGGTGATATTTCAGTAGG TGAAGTCTTTTAATTTTATGAACCTCCATAATGTGATATTTCAGGGCATCATAAGTGGTTATGAATACCTAAAGATTTTC ATCCCTTACAGTATGTTTTGGGTTTTGAATTGACCAAGTCCCACATCGAATTTTGATATATTAACAATTACAAAGAAATC ATACAAATTCCATTCACACGGTATATAATTTAGTCCCTCCCTCTTCATTAAATTTTGAAACTATCTTTTTAGCTATCCCA TTCACAAAATTCTCAATTCATATTATGGTTTTGGGCACAGGGCGTCTCCATGAACCTCCCTTCTAGGATGATGGGGATTT GTTTTCCCTTGAGAAATGGAAGTGCATGATAGTACTCTTCTTTTGTAGTGTTTTGTGTATGAAAGACAAATTTAGTAGAA CTAGTTCTGTTCATAGAAAACAGTTATCTCACTGTATGAACAGTTTACAATACATGTCTGCTAATAATGTCATTTTTTCC CTGACTAATTTTTTTTATCACCCTACTCTTAATATAGGAGACTGCTCTTGAGGAGATGAAGAAGGAGCTCCAAACAAGAC CTACAGAAAAAATGGTTGATGATCTGCGCAAGAAAGTGAAAATTTTGCAGGTGGCTTTTTTGTTCTCTTTATTCTCTAAT GACCGTTTTATTGACCACTCGCTGTGGGCCTCACTATCCATCTAACTCCTAGTGAGCTATACATGCAGGCAGTGGGTTAT AATTCAATTGAGGCTGAAGATTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAA GAACCGTAAAATGGAACATGAACTAACACAGTTGAAGGTATGATCATGGAAATGGGACATCTGATTCCCACGAGATAATA GACTCACATAACACTGGCCTTTTATGTAGTGTAGCTTTAAAGGCCATCCCAGTTAAGAAAGGATCCCCTGTACATCCTGC ATTCAAACAATGCCCAAGTTGTGATATCATCATATCAATAACAATTTCTTGTAGAAGACTGTTTTTTAAGATGATCTGCT GGTGGTATTGCTGTGCATTTTGAAGTATCTCTGTTATTCAGATGTGGTTCTACCATTTTCAGGTTACCCTTTCTGAGAAA ACATCCTTACTGGAAACAGCAGAACAGAAGATTACAGAACTTGCAGCAAAGGTTAATGAGCAACAAAAATTGATACAGAA GTTGGAAGATGATATCCTGAAGGTTTCGAACAATTACCACTAACACCTTTTACTATATGAACCACTTATATGAATCCCTT TCTTGCTCATTTCTGTATATGCATTAAAGTTTATGATGGGATTTTATGCTTTTTATTTATTTAAGGCACCTAGCTACCCC TTTTGATGCAGGGATATAGTTCCAATTCTAAAGATCGTAAAGGGACCTTCCTTGATGACTGGGATCTTTCAGAAGCTGGT GGCGGTGAGGCTTCTGAGGTAAATTCCTTGTCCATGCTGGCGTTCTTACTGCATTTTACTTTTGTTAGGAGAGCAATCTT CAACAGGAACCAAGTCTTGTGCATTCAATTGAAAAGACATGCTATCGCAATTGTTCTTTATTACTTTTTTCTTTTAGGAA TACAGAAAACCTAATTAGTTCTCATTAATGATAGATTGATATCTTCTCATTAAAATCATCCTAGGAGTCCTTAAAGCTTA TGCTTTTGGTATTTTAGTTCATGGCATGGTGTTAAAGCCTCTTTAACCAAGTAATCAATAGATCATTCCTTATCTTTCCC TTTGCCACACTGAAACTTAAATGTGATTTATCCATGCTTCAAGCCAATAATAGGCTTTGCATGGAAGGCTTTATACTTTA TACCATGATTCAGAATCTTCTTAACAAATTAAGCTTTTGAGTCTGTCATGAACCAACTATCCCAAAAGCGTAAACTATTA GGTGAAGACACATGAATAGTTTTATATTGTATTTCTAACATTTCCTCTCACGTATGAGTTCATTGGGCTTGAGGTGTGGA GTGTGGATATTGCAGACTCACCTACCTTGTATTGAAAATTTGAAATTCAATTATTATTTTTATTAGAAGAATAGTGGCAA TAGAGATCGAACTCTAGACCACTTGGTCATACAGACTCTGATACGATATCATAAATCAACTATCTCAACAGCTAAATGAA TTAGGTGAAGACACATGAATGATTTTTTTATTATATTTTGAACATGGTCAAATGGTTTAATGATTGCAATGTATTTCCTT GATATTTGAATGATGACTCTGGGGTCAATTGGTTATTTTCATAAAATTTAATCTATGCATTTAGAGTACCATGATTTTGG GAAACATGAAAAAAAATTTGCCGGATAGACTAAAGTGAGTGAAGTGAAACAATCACACAATTTCTGTCTGTTTGGAATTA AAGAATTCTTAAATTGGCTCTTTTGCAGCAGAGTACAGCAGACCAAAGGCAAGTGGCCTTGGACCAAGATCAGAGCTCAA TGCTTAAAGTGATCTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGTATGCTTTTAATTGAAA TCAACTGATTTATTTGTATTCCTTTCCGTGTAAACTTAGTTCGATCAAATTTTAGATTGTAGTGACCATTGACTTGGGTG AATTTTTCACCTTTGATAGGAAATAAGGCAGTTGAAGGAGAAGATTGGGGTATTAACAGTGGAATTGGAAAAGACCAAAG CTGATAATGTCAAACTATATGGGAAGATTCGTTATGTGCAAGATTATAGTCTTGAGAAAGTGGTTTCTAGGGGTTCTAAA AAGGTATTCTGAATTGTTCTTTGTTTTAACTTAATGTTCTTTCATTATCGTAATTCTCTTTAAACTTTTACCCTGAACAG ATTTGTTTTTCTTTTCTCGTTCAGTATGCAGAAGATGTTGAAAGTGGTTTTGCATCAGATGTTGAATCTAAATACAAGAA GATATATGAGGATGATATAAATCCTTTTGCAGCATTCTCAAAAAAGGTGAATCAGCTTGACTACTCTAATGAAGCACGGC ATTGTTCTTAATTTACTGTTGATTTTAAGCTGGTATTTAGTTGCAAAGCTTCACTACTCTAATGAAATATGCATATGTTG AAACTGAACGTCTTAACTAAAACATCAAAACCACACAATAAGAACTTCAAAGGAATCTCTATCTGCTTTTGTGGTTGGGG TTGTCAGTGTCAGACACACTTTCTCATCACAAGTATCTCTGTTAGTAAAATAATTTGAATAGAAAATGAGGTTTCAGGTG TATATCTGTGTTATTACTGAGAGTAG
CDS sequence (LotjaGi2g1v0211500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCTCCGCAAGGTGGATCCGGATCCGGACCCGACCGGGACAAACCCAACGCTCCGATCCCCGTCGTCTCCGCCTT CTGGAAAGAATTTGATTTGGAGAAGGAGAAGTCGATTTTGGATGAACAAGGGCTTCGGATTGCAGAGAACCAGGAAAACA GTCAGAAAAATAGGCGCAAGCTTGCTGAGAACACTAGAGGCTTCAAGAAAGCTTCACCTGAGGAGAAGTTAGGCTTGTTT AATAGCTTGCTTAAGGGCTACCAGGAAGAGGTTGACAATCTTACTAAGAGAGCGAAGTTTGGAGAAAATGCTTTTCTCAA CATCTATCAGAAGCTTTATGAAGCTCCGGATCCTTATCCAGCGCTTTCATCGATTGCTGAGCAAGATCTCAAGTTATCTG AGATTGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAAGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAG GCAACAATACGTAGACTTGAAGAGAGAAATAGGCAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGAT TAAGCAACGCAGTCTGGCAGAAGAGAACCAGAAAACATTGGAAATTTTGAAAGAAAGAGAACAAGTACTGCAAGATCAGT TGCAGAATGCCAAAGAAAGTGTTTCCAATATGCAGAAATTGCATGAGCTTGCACAAAACCAGCTGTTTGAACTCCGTGCC CAATCTGATGAAGATAGGGCAGCTAAGCAATCAGAGGTCACTCTTCTGATGGATGAAGTTGAACGAGCTCAAACAATGCT TCTTAGTTTGGAAAGACAGAAGGGGATGCTCCAGTCACAGTTACACACGGCAAATGAAGATACTGAGATCAAGAAGAGTG ATAATTTAGACACGAATAGTGTGCTTGAGAATTCTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTA CACAATATTGAAACAGCCTTATCAAATGAAAGAGAAGAACACATAAATGAAGTCAAGAAACTTACTGCAATGCTCAATGA AAAGGAGACTGCTCTTGAGGAGATGAAGAAGGAGCTCCAAACAAGACCTACAGAAAAAATGGTTGATGATCTGCGCAAGA AAGTGAAAATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGATTGGGAAGTGGCTACAAGTGGGGAGGAGATG AGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGTAAAATGGAACATGAACTAACACAGTTGAAGGTTACCCTTTCTGA GAAAACATCCTTACTGGAAACAGCAGAACAGAAGATTACAGAACTTGCAGCAAAGGTTAATGAGCAACAAAAATTGATAC AGAAGTTGGAAGATGATATCCTGAAGGGATATAGTTCCAATTCTAAAGATCGTAAAGGGACCTTCCTTGATGACTGGGAT CTTTCAGAAGCTGGTGGCGGTGAGGCTTCTGAGCAGAGTACAGCAGACCAAAGGCAAGTGGCCTTGGACCAAGATCAGAG CTCAATGCTTAAAGTGATCTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAGT TGAAGGAGAAGATTGGGGTATTAACAGTGGAATTGGAAAAGACCAAAGCTGATAATGTCAAACTATATGGGAAGATTCGT TATGTGCAAGATTATAGTCTTGAGAAAGTGGTTTCTAGGGGTTCTAAAAAGTATGCAGAAGATGTTGAAAGTGGTTTTGC ATCAGATGTTGAATCTAAATACAAGAAGATATATGAGGATGATATAAATCCTTTTGCAGCATTCTCAAAAAAGAACTTCA AAGGAATCTCTATCTGCTTTTGTGGTTGGGGTTGTCAGTGTCAGACACACTTTCTCATCACAAGTATCTCTGTTAGTAAA ATAATTTGA
Protein sequence (LotjaGi2g1v0211500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAPQGGSGSGPDRDKPNAPIPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNRRKLAENTRGFKKASPEEKLGLF NSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQ ATIRRLEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFELRA QSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDTNSVLENSLNAKEKLISELNMEL HNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKELQTRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEM SKMESLLLDKNRKMEHELTQLKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDDWD LSEAGGGEASEQSTADQRQVALDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGVLTVELEKTKADNVKLYGKIR YVQDYSLEKVVSRGSKKYAEDVESGFASDVESKYKKIYEDDINPFAAFSKKNFKGISICFCGWGCQCQTHFLITSISVSK II
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 20 | 612 | 593 | 1.1E-189 | – | |
| PANTHER | 20 | 612 | 593 | 1.1E-189 | – | |
| Coils | 45 | 65 | 21 | - | – | |
| MobiDBLite | 48 | 68 | 21 | - | – | |
| MobiDBLite | 52 | 68 | 17 | - | – | |
| Coils | 84 | 104 | 21 | - | – | |
| Coils | 125 | 190 | 66 | - | – | |
| Coils | 193 | 241 | 49 | - | – | |
| Coils | 253 | 287 | 35 | - | – | |
| Coils | 299 | 358 | 60 | - | – | |
| Coils | 418 | 459 | 42 | - | – | |
| Pfam | 434 | 612 | 179 | 3.1E-38 | ||
| Coils | 510 | 551 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intra-Golgi vesicle-mediated transport | The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network). | ||
| Cellular component | Integral component of Golgi membrane | The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0211500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…