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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0216200 |
| Transcript ID | LotjaGi2g1v0216200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT2G35250.1 NEP-interacting protein, putative (DUF239); Swiss-Prot: sp|Q01386|KAPR_NEUCR cAMP-dependent protein kinase regulatory subunit; TrEMBL-Plants: tr|I3SWN5|I3SWN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0216200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:66915929..66919389) extracted from Lotus japonicus Gifu genome v1.2.
AGTTCGTTTGCTTCAATAAAATTATGGCAATATTTCTCTTTTTACTTGTTAGTTGTTGTATCCAGTGCTATGAAGTTAAT GGAGGAAGAATACACCACCAAAATAAACAACAACTTCAGTTACATGACTACCAAAACTTTCAGGTATTATACTCTCAAGT CTCTCATTGTCACCTAATTAATTTTCTATCATAATGTATTTAAATGGCACGTGGTTAAAAAATGCAGCCTTCAATAGATG ATTCTTTTGATTGTGTTGATATGTACAACCAACCCGCTTTTCAACACCCTTTACTCAAAAATCACAAAATCCAGGTAACT ATTGTTGCTGATTCTTGAGTCATTTAAAAGATTTTTTTATACTTGCTTATAGAAATGTAAGCATCATTTAAGTATACTTG TGAATATTATAATTGTATTAATCTTATTAATTTATCAGGTCGTTTTTTAATATTTAGACTTTAAATTTTGTATCTAACAT CTTCTTCTCATTGTAACAAAGCTCTTCCCAACTTTTCTGAGAACCACCATGCAAAATAGATCCAGTTCCTTTGGTAAAGC TGTTAAATATCAGAATTTCATCAGAGAATGTCCCCTAGGAAAAGTGCCTATTTTAAAGACCACAACGAGGCAAAAGATGG TTACCAAGTCATCTTCAAAATCGCAACTTGATAATTTTAATGAAAACTCTCAAAGTAACCCTGGGCATCATGTAAGTTGG TTTATCAAAAGTTTGTCTTCAAACTTTTCATTTGATGAATTGTTATCATTATAAAAATATTACTATTCCTTGTAAATTTA AATTTTTATCTTGCTTAAATTTTATTTTTAATTGAAAACATTTTTCTTTAGAAAAAGACAAATAAATTTGTCAGATATAG AACAATTTTAAATAATGATAACTTCATATTTAATTATTTATTTACTAATCACATTATTATCTATTCAAAACATGTTTATC TCATTACTTTCATATCTTATAATCCTCAAGTTTGCTACCCTTGAAACAACCAAAGATATGATGTTTCGTGGAGGAAGTGC AAGAATCAGCACGTATAATTTATCGCTTCAAGAAAACCAATACAGCATATCTGGAATTTGGATTCAAAGTGGTCCACCAA CAGAACTCAATAGTATACAAGTCGGAACTGGTGTAAGTTAATTTTTATCCTGTTTATGCAAATAATTTTTTTGTTTCATG ACAATTAACAAATGGTGAACAATTTTATTTTTCAAATGACCCAATTTATCATGTTTCGTTTGTTATATTTATTCTATATA CACTATTTTTATGTAAAATATTCTTATTATGCAAGGTTCATCCAAGCTTATATGGAGACCATCAAATACGTATAACCGCA TATTGGACAGTAAGACTCATAAATTAATGCACTGTTCTTTTCTTAATTACTTAATATGATTATGCTTATCTAGATAAATT CATGTAGGCAGATGGTTATCACAAAACTGGATGTTATAATTACCAATGCCCAGGTTTTGTGCAAGTCCATCGAGGAACTG GCTTTGGAGCAGTCCTTCTGTACAGCTCTGAGATTGGAACACTAAATAAATATTTCTGGAGTGTCAAAGTCAAACAGGTA ACTAAATTTAAAAAAATAAGACTCTATCAATTTGGTAACATCTTCACCTTTATGAAATTTAAAACCTTCTAAACGTTTTT GTACCCATACAAAAATTTAAAATTTAGTTTATTGTTATTAGACACTAACTTAGCCAAAAGAATTTCTCAGTAACTTACAA TCATAAAAAAAATTTGACATAAAATATATTAAATGATGAATTTTAATAAAGAGAAATGTACATAATTTAAATATTCTAAC TAAATAAAAAATAAATAAACATAATAAATTTGAATATTTCAAATTACTACTTTTAATTTAAAAATTTATATGGAAGTGTT TTATTACATAGATCGTTAAATTAGTTTTTAATTAAAAGGTGTTAATGAAGTCTTAAATTTTAAAAATATATAAGTTATGA AACTTCTAATGATGTGTGAAGTTAACTTTTCATTTATTTTACTATTATATTTGGTGCATATTTTCACATTTTTTAATTTA GTAATAGTGTATTATACTTATATTAAATTTTAACGTAAAAACATATCATCTAACATTTATAAATTAGTAAATGAAACTAG TCACATGCCCCTTATAAACCATCTTTTTTCTGTGGATTGGATAATTGTAATTACTAATTCCATTAAAAAAAACTTGGGTG ATCTTTGTTATTTGGATGCAGAAATGAGTATAAGTTAATTTGATGATATCATAGTAATTCCAATTTTTTATTTTGTGTTT TTATAGATTTCTAATGGTAGTGCTTTCTTTTCGGTTTATAATTATATATCAGGGAATGATGTGTTTCGCCCCCCCACATA TATAAAATGGGGATGCGGATATATCTTGTCAAACACAAAAAATATCATTTGTGTAAGAATTATTTATGAAATAACTGATA TGATTTACAATTTCTAAATTATAAGCATTTGCCTTCACGAAAATAAACGTGTACCATTTGTTTGACTATAATGCATGCTA TAAAGATTCATTTTCTTAACTATAAACAATGTGGTTACCAAAAAAATATATTGTTGGACAATTTAATTGCAAATTTAATT GTTTCATTGAATTAATAAATTATACAACATTAATAAGTGAAACTGTTGAAGCTTCTAACAATATATTTATATATTTTTAA AATATCATTTCTACCTTTAAAATTTTTATAAATAAATAATATTTTAATTTAATTAATATTAAAAATAAATATTCTAACAT GTCTATTATAAATTTAAATACTGTTGAAATAATTAAGAATGTAACATATAAAATATCTTGTAACATTCATAAAAAAAATT AAGGTATTATCGATTTATATGTGCTTTATAATATTTTATTTCTTCATTAGATATGAATGCTAGTATCATTTGTATTCAAC TTATTTATTATCTTTTAACTACTTGAATATTTATAGGATCAATCCACAGGTAACTGGTGGTGCATTGGTGGGAACGATAA TGTGGCATTGGGGTATTGGCCTAAAGAAATATTTACTCACTTACGTCAAGGTTCATCTTTAATTATATATGGAGGTGAAA CATTTGCTCCACCCAATATGATTAGTCCCCCAATGGGTAGTGGTAGATTGCCTAAGGAGTTATTCAAAAACTCTGGTTTC ATTTCAAATCTTGAGATTGTCGATTCAAATTACAATGAAGTCGAAATAAAACCCAAGGACATGAAGTCAAATTGTGATAC AACACCTAATTGTTATGACATGTTATACCATGGTTATGAAGGATCTTTCTACCGACAAGCCTTTCTCTATGGTGGGCCAG GTGGAAAATGTGGTATATGATTACATTTAAAACTTTATTTAATAAAAGGCTGTTCGTTGATTCTATGGATTCTTGGAATT TAGTATGCGTGAACTTCAACA
CDS sequence (LotjaGi2g1v0216200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATATTTCTCTTTTTACTTGTTAGTTGTTGTATCCAGTGCTATGAAGTTAATGGAGGAAGAATACACCACCAAAA TAAACAACAACTTCAGTTACATGACTACCAAAACTTTCAGCCTTCAATAGATGATTCTTTTGATTGTGTTGATATGTACA ACCAACCCGCTTTTCAACACCCTTTACTCAAAAATCACAAAATCCAGCTCTTCCCAACTTTTCTGAGAACCACCATGCAA AATAGATCCAGTTCCTTTGGTAAAGCTGTTAAATATCAGAATTTCATCAGAGAATGTCCCCTAGGAAAAGTGCCTATTTT AAAGACCACAACGAGGCAAAAGATGGTTACCAAGTCATCTTCAAAATCGCAACTTGATAATTTTAATGAAAACTCTCAAA GTAACCCTGGGCATCATTTTGCTACCCTTGAAACAACCAAAGATATGATGTTTCGTGGAGGAAGTGCAAGAATCAGCACG TATAATTTATCGCTTCAAGAAAACCAATACAGCATATCTGGAATTTGGATTCAAAGTGGTCCACCAACAGAACTCAATAG TATACAAGTCGGAACTGGTGTTCATCCAAGCTTATATGGAGACCATCAAATACGTATAACCGCATATTGGACAGCAGATG GTTATCACAAAACTGGATGTTATAATTACCAATGCCCAGGTTTTGTGCAAGTCCATCGAGGAACTGGCTTTGGAGCAGTC CTTCTGTACAGCTCTGAGATTGGAACACTAAATAAATATTTCTGGAGTGTCAAAGTCAAACAGGATCAATCCACAGGTAA CTGGTGGTGCATTGGTGGGAACGATAATGTGGCATTGGGGTATTGGCCTAAAGAAATATTTACTCACTTACGTCAAGGTT CATCTTTAATTATATATGGAGGTGAAACATTTGCTCCACCCAATATGATTAGTCCCCCAATGGGTAGTGGTAGATTGCCT AAGGAGTTATTCAAAAACTCTGGTTTCATTTCAAATCTTGAGATTGTCGATTCAAATTACAATGAAGTCGAAATAAAACC CAAGGACATGAAGTCAAATTGTGATACAACACCTAATTGTTATGACATGTTATACCATGGTTATGAAGGATCTTTCTACC GACAAGCCTTTCTCTATGGTGGGCCAGGTGGAAAATGTGGTATATGA
Protein sequence (LotjaGi2g1v0216200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIFLFLLVSCCIQCYEVNGGRIHHQNKQQLQLHDYQNFQPSIDDSFDCVDMYNQPAFQHPLLKNHKIQLFPTFLRTTMQ NRSSSFGKAVKYQNFIRECPLGKVPILKTTTRQKMVTKSSSKSQLDNFNENSQSNPGHHFATLETTKDMMFRGGSARIST YNLSLQENQYSISGIWIQSGPPTELNSIQVGTGVHPSLYGDHQIRITAYWTADGYHKTGCYNYQCPGFVQVHRGTGFGAV LLYSSEIGTLNKYFWSVKVKQDQSTGNWWCIGGNDNVALGYWPKEIFTHLRQGSSLIIYGGETFAPPNMISPPMGSGRLP KELFKNSGFISNLEIVDSNYNEVEIKPKDMKSNCDTTPNCYDMLYHGYEGSFYRQAFLYGGPGGKCGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 388 | 368 | - | – | |
| PANTHER | 29 | 385 | 357 | 1.2E-117 | – | |
| PANTHER | 29 | 385 | 357 | 1.2E-117 | – | |
| Pfam | 45 | 142 | 98 | 8.5E-17 | ||
| MobiDBLite | 119 | 139 | 21 | - | – | |
| Pfam | 158 | 382 | 225 | 3.7E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0216200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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