Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0216700 |
| Transcript ID | LotjaGi2g1v0216700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT3G18830.1 polyol/monosaccharide transporter 5; Swiss-Prot: sp|Q8VZ80|PLT5_ARATH Polyol transporter 5; TrEMBL-Plants: tr|K7L0G9|K7L0G9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0216700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:67137525..67140865) extracted from Lotus japonicus Gifu genome v1.2.
AAAACAATAGTTATACTATTAATATTGTTTTCAAAACAAAACCAATCAAAATAATGAAACATATAAACCTCAAAAAGAAA AAGAGAAATATAGAGGAAGAGAGAATGGTAGAAATCTGGAACATAACAAATGGAGAGAGAGACAGAGAGTCAATAAGCAT GGGTTTAGTGGCCAAGTTTGAGAAAGGGGGTTCTTGAGGTTGATAGATTGCTTTGGTGATGAGCTGACACAGAAAAATCA AAACATGGTAATGGATGTGTTTCTTCTGTAAGAGGTGTGAAAATGGGAGGGTGAGAAGAGAAGATGAGGACAAATTAGTC ATTTTATTAAAAATAGTCACCATTCTCCAGTTTTCTTTCCGAAAGAGAGGTAAAGGTTTTTGCCTGTGGGACCCATCAAA ATCTTTCTTTCCTTCATTTGTCTGAAGGAACCGAATGAGGGAAGGCATCGTAATTCTAATCTACCCTCTTTTCCTTCCCT CCCTTTCTTTTCTTTGTATTTTCTGCTGTTCCAAACACTGCGTTATCCTCGACACCTCTTCATTTAAGGAGGATCGTGTC GTACAATTTTCCAAAAGCCCTTTTCTGCTGTTCTTCTTTTGCATTTCCCCTTTCCAAGATTCAAGACAATTCTGCTATGG AACAGAACATGGACCATGATTACCACCCACTTCCAGGTTCAGATTCTCCTGCTGATGCAAAGGGTGAAGCTAGCTTTCAC AACCACAACATTGCACATGATGATCATGTCTCATATCAAAGCAATCCCAATCTCAACAAGTATGCACTTGCTGGTGCTAT TCTGGCTTCCACAAATTCCATTCTCTTGGGCTATGGTGAGTGAGTTTAATCAACTTCATAAACCTGTTCAAAATTCAAGA CTTCAATTTTGATGCACCACGGAAACATTTTACACGTACTGTCAACCGATTAGATTTCGAAGTATGAGTAAAAAATGTTT ACACTGTCTATGCGTGTACCTTTTCCCCAAAATTGAATGCCTGAAAAATTTGCATCTATCAATCTATCATCACTAGGACC TGGTCAAATCACAAACCAAATTGAAATTGAATTGTGGATGACTTGATGTAAAATTGTTTTTGTGTATGTGTGTGTGGTGC AGATATTGGGGTGATGAGTGGTGCTGTGATATTCATAAAGAAAGATCTCAACATCACATCGGTCCAAGTAGAAATCTTAG TTGGGTGCCTAAATGTGTGCTCCTTATTTGGATCGCTTGCCTCGGGCAAAACCTCTGATTGGATTGGAAGAAGGTACACA ATCATGGTTGCTGCAGCAACATTCCTAATAGGTGCTATTCTCATGGGGTTAGCACCTTCATTCCCATTCCTCATGGCGGG ACGTGTGGTTGCCGGAATCGGTGTTGGTTACTCCCTCATGATTTCCCCGGTATATGTTGCAGAGCTTTCCCCTGCTCTCA CCAGAGGATTCCTCACTTCTCTCCCTGAAGTCTTCATCAGTGTTGGCATTCTCATTGGTTACATATCCAATTATGCTCTC TCAGGCCTTCCAAGTGACACAAGCTGGAGGCTCATGCTTGGTCTAGCAGCATTTCCAGCAATTGTAGTTGCATTGGGTGT GCTTGCAATGCCAGAGTCACCGCGCTGGCTTGTCATGAAGGGAAAAATTGAGGAAGCGAAGAAGGTTCTGATCAGAACAT CAGAGGACAAAGGAGAAGCTGAATTGAGGCTTGCAGAGATAATAGAAGCTGCTTCTGTCCAGGGAATGACCCAGGTAGAG ATAAAATGGGGCGGTCACTGTAACATCCGGGTGTCACTAACCTATGAGCTATGTGCATGTAGGACATTTCCTCGCTTCCT CCAGCGACTTGAGGGCTAAGTACCTTCGGACACACAAGTCTAAAACCAGTTCAGCCACTATTAGCTGGAGGGGGCGAGGA AATGTCCTCCCAATACAAATTTCTTCTTAATAGAATAGTATTTAAGTATTGTTTTTGCTTCCCTAAAATTTTTAAACGGT CACTTTCAACTAATGACTGTTAATTTTGATTAACATGTTTAAACTTTGCTCCCTTACTAATTTTTTTCTGGTTTCATTGC ATGTTTATATCACAAACCAGGACAAAGATAAAGCTTCATCTTCTGGTTCTGATTCTTCTGTATGGAATGGACAAGGGGTA TGGAGGGAGTTACTTATTTCACCCACTCGCCCTGTGTTCAGGATTCTAGTGGCAGCAATTGGTCTTAACTTCTTCATGCA GGCTTCTGGGAATGATGCTGTGATATATTACAGCCCAGAAGTGTTCAGAGAAGCTGGGATCCAGAGTGACCAGCAGCTTT TTGGTGTTACAATCATCATGGGGATAGCCAAGACTTGCTTTGTTTTCATGTCTGCATTGGTCTTGGACAGGTTTGGGAGG AGGCCCATGTTGTTGTTAGGCTCATTTGGCATGGCATTGTCATTGTTTTTCTTGGGCTTTGGCTGCACTTTTCTTCAGTA CTCAAGTGACAAGCCTGGGTGGGCTATTGCTCTATGTGTGGTTGCTGTGTGTGCTGCAGTTTCCTTCTTCTCTATTGGTC TTGGGCCTACAACATGGGTTTACTCATCAGAGATTTTCCCTATGAGATTAAGGGCCCAAGGCTCCAGCTTGGCCATTTCT GTGAACCGTTTGGTGAGTGGGGTGGTGTCCATGTCATTTTTGAGCATCTCAGAGGCAATTACATTTGGGGGCATGTTCTT TGTGCTGGGTGGGGTCATGGTGGTTGCTACACTTTTCTTTTACTACTTTTTACCAGAGACCAAAGGCAAGAGCTTAGAGG AGATTGAAGCTTTGTTTGAAGACGAGGCACATTGAATTGATTACAAATCCAGCTCCTTGTTCTAAAACAGTTGTTGGGGT GAATCAGTGATGTGCTGATTGCAAACAATGGTCACAATCGGTTTTGTTGTTGTTGTTGTCAAAGAGATTAGCACATAAAT GCAATTTTTTTGTTTGTTCTATGTTTAATTTGATTGATTTGTTTTGCCTGATAAGACACGCAATTGGATTTGGATGAATG TTAGAAAAAAGGCTAGAGTGGTTGATACATTATACTGCATTGTCAAGTAGGTGTGATTCAAAGGCAGAAATAGAATTGCT TACAATTCAGAGCTTCCCTGATGAAGGTAGTGTTTACTTTAGTCACTTCACGGTATGGGATACTCTCCATGGATTTTTTG CACTATTTTTCTATTATTTTGGGTATCTACGCTTATCCCCTCGAAATTTATTACAAATATACTTAATATCATTTTTATTT AAAATATACACTTCATCCTACTTATCTAACATTTACTCACCTTTAAATTGAGACTAGCCTT
CDS sequence (LotjaGi2g1v0216700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACAGAACATGGACCATGATTACCACCCACTTCCAGGTTCAGATTCTCCTGCTGATGCAAAGGGTGAAGCTAGCTT TCACAACCACAACATTGCACATGATGATCATGTCTCATATCAAAGCAATCCCAATCTCAACAAGTATGCACTTGCTGGTG CTATTCTGGCTTCCACAAATTCCATTCTCTTGGGCTATGATATTGGGGTGATGAGTGGTGCTGTGATATTCATAAAGAAA GATCTCAACATCACATCGGTCCAAGTAGAAATCTTAGTTGGGTGCCTAAATGTGTGCTCCTTATTTGGATCGCTTGCCTC GGGCAAAACCTCTGATTGGATTGGAAGAAGGTACACAATCATGGTTGCTGCAGCAACATTCCTAATAGGTGCTATTCTCA TGGGGTTAGCACCTTCATTCCCATTCCTCATGGCGGGACGTGTGGTTGCCGGAATCGGTGTTGGTTACTCCCTCATGATT TCCCCGGTATATGTTGCAGAGCTTTCCCCTGCTCTCACCAGAGGATTCCTCACTTCTCTCCCTGAAGTCTTCATCAGTGT TGGCATTCTCATTGGTTACATATCCAATTATGCTCTCTCAGGCCTTCCAAGTGACACAAGCTGGAGGCTCATGCTTGGTC TAGCAGCATTTCCAGCAATTGTAGTTGCATTGGGTGTGCTTGCAATGCCAGAGTCACCGCGCTGGCTTGTCATGAAGGGA AAAATTGAGGAAGCGAAGAAGGTTCTGATCAGAACATCAGAGGACAAAGGAGAAGCTGAATTGAGGCTTGCAGAGATAAT AGAAGCTGCTTCTGTCCAGGGAATGACCCAGGACAAAGATAAAGCTTCATCTTCTGGTTCTGATTCTTCTGTATGGAATG GACAAGGGGTATGGAGGGAGTTACTTATTTCACCCACTCGCCCTGTGTTCAGGATTCTAGTGGCAGCAATTGGTCTTAAC TTCTTCATGCAGGCTTCTGGGAATGATGCTGTGATATATTACAGCCCAGAAGTGTTCAGAGAAGCTGGGATCCAGAGTGA CCAGCAGCTTTTTGGTGTTACAATCATCATGGGGATAGCCAAGACTTGCTTTGTTTTCATGTCTGCATTGGTCTTGGACA GGTTTGGGAGGAGGCCCATGTTGTTGTTAGGCTCATTTGGCATGGCATTGTCATTGTTTTTCTTGGGCTTTGGCTGCACT TTTCTTCAGTACTCAAGTGACAAGCCTGGGTGGGCTATTGCTCTATGTGTGGTTGCTGTGTGTGCTGCAGTTTCCTTCTT CTCTATTGGTCTTGGGCCTACAACATGGGTTTACTCATCAGAGATTTTCCCTATGAGATTAAGGGCCCAAGGCTCCAGCT TGGCCATTTCTGTGAACCGTTTGGTGAGTGGGGTGGTGTCCATGTCATTTTTGAGCATCTCAGAGGCAATTACATTTGGG GGCATGTTCTTTGTGCTGGGTGGGGTCATGGTGGTTGCTACACTTTTCTTTTACTACTTTTTACCAGAGACCAAAGGCAA GAGCTTAGAGGAGATTGAAGCTTTGTTTGAAGACGAGGCACATTGA
Protein sequence (LotjaGi2g1v0216700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQNMDHDYHPLPGSDSPADAKGEASFHNHNIAHDDHVSYQSNPNLNKYALAGAILASTNSILLGYDIGVMSGAVIFIKK DLNITSVQVEILVGCLNVCSLFGSLASGKTSDWIGRRYTIMVAAATFLIGAILMGLAPSFPFLMAGRVVAGIGVGYSLMI SPVYVAELSPALTRGFLTSLPEVFISVGILIGYISNYALSGLPSDTSWRLMLGLAAFPAIVVALGVLAMPESPRWLVMKG KIEEAKKVLIRTSEDKGEAELRLAEIIEAASVQGMTQDKDKASSSGSDSSVWNGQGVWRELLISPTRPVFRILVAAIGLN FFMQASGNDAVIYYSPEVFREAGIQSDQQLFGVTIIMGIAKTCFVFMSALVLDRFGRRPMLLLGSFGMALSLFFLGFGCT FLQYSSDKPGWAIALCVVAVCAAVSFFSIGLGPTTWVYSSEIFPMRLRAQGSSLAISVNRLVSGVVSMSFLSISEAITFG GMFFVLGGVMVVATLFFYYFLPETKGKSLEEIEALFEDEAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 48 | 48 | - | – | |
| TIGRFAM | 33 | 512 | 480 | 1.8E-105 | ||
| SUPERFAMILY | 36 | 513 | 478 | 1.44E-74 | ||
| PANTHER | 42 | 520 | 479 | 3.3E-228 | – | |
| PANTHER | 42 | 520 | 479 | 3.3E-228 | – | |
| Gene3D | 43 | 521 | 479 | 4.9E-127 | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 49 | 78 | 30 | - | – | |
| ProSiteProfiles | 53 | 505 | 453 | 51.362 | ||
| Pfam | 54 | 516 | 463 | 1.3E-112 | ||
| CDD | 56 | 512 | 457 | 0.0 | – | |
| PRINTS | 61 | 71 | 11 | 2.6E-21 | ||
| Phobius | 79 | 83 | 5 | - | – | |
| Phobius | 84 | 106 | 23 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| ProSitePatterns | 107 | 124 | 18 | - | ||
| Phobius | 118 | 136 | 19 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 137 | 141 | 5 | - | – | |
| Phobius | 142 | 164 | 23 | - | – | |
| PRINTS | 144 | 163 | 20 | 2.6E-21 | ||
| TMHMM | 146 | 168 | 23 | - | – | |
| ProSitePatterns | 149 | 174 | 26 | - | ||
| Phobius | 165 | 175 | 11 | - | – | |
| TMHMM | 175 | 197 | 23 | - | – | |
| Phobius | 176 | 195 | 20 | - | – | |
| Phobius | 196 | 206 | 11 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 207 | 229 | 23 | - | – | |
| Phobius | 230 | 308 | 79 | - | – | |
| Phobius | 309 | 327 | 19 | - | – | |
| PRINTS | 323 | 333 | 11 | 2.6E-21 | ||
| Phobius | 328 | 349 | 22 | - | – | |
| Phobius | 350 | 372 | 23 | - | – | |
| TMHMM | 350 | 372 | 23 | - | – | |
| ProSitePatterns | 368 | 385 | 18 | - | ||
| Phobius | 373 | 380 | 8 | - | – | |
| Phobius | 381 | 404 | 24 | - | – | |
| TMHMM | 382 | 404 | 23 | - | – | |
| Phobius | 405 | 409 | 5 | - | – | |
| Phobius | 410 | 432 | 23 | - | – | |
| TMHMM | 411 | 433 | 23 | - | – | |
| PRINTS | 417 | 438 | 22 | 2.6E-21 | ||
| Phobius | 433 | 452 | 20 | - | – | |
| PRINTS | 440 | 452 | 13 | 2.6E-21 | ||
| Phobius | 453 | 473 | 21 | - | – | |
| Phobius | 474 | 478 | 5 | - | – | |
| TMHMM | 477 | 499 | 23 | - | – | |
| Phobius | 479 | 501 | 23 | - | – | |
| Phobius | 502 | 521 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0216700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…